Emergent dynamics of biological networks

In this topical collection (25 articles)

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1. EditorialNotes

   Editorial

   Mohit Kumar Jolly, Susmita Roy Article:82

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2. 

   OriginalPaper

   Protein as evolvable functionally constrained amorphous matter

   Madhusmita Tripathy, Anand Srivastava, Srikanth Sastry, Madan Rao Article:73

3. Review

   Effects of immunosuppressants on T-cell dynamics: Understanding from a generic coarse-grained immune network model

   Sonali Priyadarshini Nayak, Biman Bagchi, Susmita Roy Article:70

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4. Review

   Nucleotide-based genetic networks: Methods and applications

   Rahul K Verma, Pramod Shinde, Sarika Jalan Article:63

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5. 

   OriginalPaper

   Modular organization of gene–tumor association network allows identification of key molecular players in cancer

   Tharmaraj Jesan, Sitabhra Sinha Article:60

6. 

   Review

   Discovering design principles for biological functionalities: Perspectives from systems biology

   Priyan Bhattacharya, Karthik Raman, Arun K Tangirala Article:56

7. 

   Review

   Network approach to understand biological systems: From single to multilayer networks

   Sayantoni Chaudhuri, Ashutosh Srivastava Article:55

8. 

   Review

   Collective motion: Influence of local behavioural interactions among individuals

   Rumi De, Dipanjan Chakraborty Article:48

9. 

   Review

   Leveraging deep learning algorithms for synthetic data generation to design and analyze biological networks

   Srisairam Achuthan, Rishov Chatterjee, Sourabh Kotnala… Article:43

10. 

    OriginalPaper

    Emergence of networks of shared restriction-modification systems in phage–bacteria ecosystems

    Rasmus Skytte Eriksen, Nitish Malhotra… Article:38

11. 

    OriginalPaper

    Integrative network-based approaches identified systems-level molecular signatures associated with gallbladder cancer pathogenesis from gallstone diseases

    Nabanita Roy, Barasha Rani Dihingia, Pankaj Barah Article:31

12. 

    OriginalPaper

    Influence of the Allee effect on extreme events in coupled three-species systems

    Deeptajyoti Sen, Sudeshna Sinha Article:30

13. 

    OriginalPaper

    Mean residence times of TF-TF and TF-miRNA toggle switches

    Kuheli Biswas, Mohit Kumar Jolly, Anandamohan Ghosh Article:26

14. Review

    Identifying critical transitions in complex diseases

    Smita Deb, Subhendu Bhandary, Sudipta Kumar Sinha… Article:25

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15. Review

    Emerging landscape of molecular interaction networks: Opportunities, challenges and prospects

    Gauri Panditrao, Rupa Bhowmick, Chandrakala Meena, Ram Rup Sarkar Article:24

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16. 

    Review

    Emergent phenomena in living systems: A statistical mechanical perspective

    Indrani Bose Article:22

17. 

    Review

    Cancer: More than a geneticist’s Pandora’s box

    Kritika Saxena, Ayalur Raghu Subbalakshmi, Prakash Kulkarni… Article:21

18. 

    OriginalPaper

    Effects of length-dependent positive feedback on length distributions of microtubules undergoing hydrolysis

    Binayak Banerjee, Sankeert Satheesan, Dipjyoti Das Article:20

19. 

    Perspectives

    Nine things to keep in mind about mathematical modelling in ecology and evolution

    Amitabh Joshi Article:19

20. 

    Review

    Queen succession in the Indian paper wasp Ropalidia marginata: On the trail of the potential queen

    Raghavendra Gadagkar, Nitika Sharma, Noa Pinter-Wollman Article:18

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