Abstract
Objective
Lilium amabile Palibin (2n = 2x = 24) is an endemic lily species in Korea. B chromosomes are supernumerary chromosomes and the presence of B chromosome in L. amabile was known by previous researches. The current research was conducted to characterize the genetical and cytological features of the B chromosome plants in L. amabile.
Methods
Karyotype and B chromosome cytotype analyses were carried out among 135 L. amabile accessions that were collected from six geographical locations in Korea using conventional aceto-carmine staining as well as FISH technique with ribosomal RNA gene probes.
Results
The karyotype of L. amabile genome consisted of two large metacentric, four intermediate subtelocentric, and six intermediate to small acrocentric chromosomes in which chromosomes 1, 6 and 7 carried the 45S rRNA gene loci and chromosome 3 carried the 5S rRNA gene. There were 4 types of B chromosomes, two large B chromosomes and two small B chromosomes. The ribosomal RNA gene loci were not present in the B chromosomes. The 135 accessions were classified into 13 cytotypes including diploids and different B chromosome aneuploids. Among the aneuploids, the most frequent cytotype was 24 + 1B, which was followed by 24 + 2B, 24 + 1b, 24 + 1B + 2b, 24 + 1B + 4b, and 24 + 2B + 4b.
Conclusion
The karyotype of L. amabile was consistent with other species in the genus Lilium without polyploids. The B chromosome cytotypes were highly variable and the occurrences of different cytotypes were random among the six populations, implying that the B and b chromosome occurrence was random in each population.
Similar content being viewed by others
References
Banaei-Moghaddam A, Schbert V, Kumke K, Weib O, Klemme S, Nagaki K, Macas J, González-Sánchez M, Heredia V, Gomez-Revilla D et al (2012) Nondisjunction in favor of a chromosome: the mechanism of rye B chromosome drive during pollen mitosis. Plant Cell 24:4124–4134
Banaei-Moghaddam A, Martis MM, Macas J, Gundlach H, Himmelbach A, Altschmied L, Mayer KFX, Houben A (2014) Genes on B chromosomes: old questions revisited with new tools. Biochim Biophys Acta 1849:64–70
Beukeboom LW (1994) Bewildering Bs: an impression of the 1st B-chromosome conference. Heredity 73: 328–336
Chung TH (1965) Illustrated Flora and Fauna of Korea (plants). Samhwa Pub. Com. Seoul Korea
D’Ambrosio U, Alonso-Lifante MP, Barros K, Kovaík, de Xaxars GM, Garcia S (2017) B-chromosome: a database on B-chromosomes of plants, animals and fungi. New Phytol 216:635–642
Gan Y, Liu F, Chen D, Wu Q, Qin Q, Wang C, Li S, Zhang X, Wang Y, Wang K (2013) Chromosomal locations of 5S and 45S rDNA in Gossypium genus and its phylogenetic implications revealed by FISH. PloS One 8:e68207. https://doi.org/10.1371/journal.pone.0068207
Gao YD, Zhou SD, He XJ (2011) Karyotype studies in thirty-two species of Lilium (Liliaceae) from China. Nordic J Bot 29:746–761
Hasterok R, Wolny E, HOsiawa M, Kowalczyk M, Kula-Ksazczyk S, Ksiazczyk T, Heneen WK, Maluszynska J (2006) Comparative analysis of rDNA distribution in chromosomes of various species of Brassicaceae. Ann Bot 97:205–216
Haw SG (1986) The lilies of China. B. T. Batsford Ltd., London
Houben A (2017) B chromosomes—a matter of chromosome drive. Front Plant Sci 8:210
Houben A, Bannaei-Moghaddam AM, Klemme S, Timmis JN (2014) Evolution and biology of supernumerary B chromosomes. Cell Mol Life Sci 71:467–478
Huang W, Du Y, Zhao X, Jin W (2016) B chromosome contains active genes and impacts the transcription of a chromosomes in maize (Zea mays L.). BMC Plant Biol 16:88. https://doi.org/10.1086/s12870-016-0775-7
Jones RN, Rees H (1982) B chromosomes. Academy Press, New York
Jones RN, Viegas W, Houben A (2008) A century of B chromosomes in plants: so what? Ann Bot 101:767–775. https://doi.org/10.1039/aob/mcm167
Kayano H (1962a) Cytogenetic studies in Lillium callosum V. Supernumerary B chromosome in wild populations. Evolution 16:246–253
Kayano H (1962b) Cytogenetic studies in Lillium callosum V. Transmission and fertilization of a small supernumerary B chromosome. Evolution 16:86–89
Kim JH, Kyung HY, Choi YS, Lee JK, Hiramatsu M, Okubo H (2006) Geographical distribution and habitat differentiation in diploid and triploid Lilium lancifolium of South Korea. J Fac Agr Kyushu Univ 51:239–243
Kim JH, Nguyen TX, Song YS, Kim NS (2016) Natural triploid Lilium leichtlinii var. maximowiczii in Korea. Plant Species Biol 31:98–106
Kumazawa M, Kimura M (1946) Karyotypes in the Martagon group, chromosome morphology in Lilium. III Jap J Genet Supp 1:100–109
Lee TB (1982) Illustrated Flora of Korea. Hyangmoonsa, Seoul. (In Korean)
Levan A, Fredga K, Sandberg A (1964) Nomenclature for centromeric position on chromosomes. Hereditas 52(2):201–220
Martis MM, Klemme S, Banaei-Moghddam AM, Blatnner FR, Macas J, Schutzer T, Scholz U, Gundlach H, Wicker T, Šimková H et al (2012) Selfish supernumerary chromosomes reveals its origin as a mosaic of host genome and organellar sequences. Proc Natl Acad Sci USA 109:13343–13346
McRae WA (1998) Lily species. In: Lilies. Timber Press, Portland, pp 105–204
McStay B (2016) Nucleolar organizing regions: genomic ‘dark matter’ requiring illumination. Genes Dev 30:1598–1610
Müntzing A (1958) Accessory chromosomes. Trans Rose Res Inst 22:1–15
Nguyen TX, Kim JY, Rai R, Kim JH, Kim NS, Wakana A (2015) Karotype analysis of Korean Lilium maximowiczii Regal populations. J Fac Agr Kyushu Univ 60:315–322
Nguyen TX, Lee SI, Rai R, Kim NS, Kim JH (2016) Ribosomal DNA locus variation and REMAP analysis of the diploid and triploid complexes of Lilium lancifolium. Genome 59:551–564
Östergren G, Heneen WK (1962) A squash technique for chromosome morphological studies. Hereditas 48:332–341
Reeves A, Tear J (2000) Micro measure for windows, version 3.3. http://www.colostate.eud/Depts/Biology/MicroMeasure
Roman H (1947) Mitotic non-disjunction in the case of interchange involving the B-type chromosomes in maize. Genetics 32:391–409
Roman H (1948) Directed fertilization in maize. Proc Natl Acad Sci USA 34:36–42
Samejima J (1958) Meiotic behavior of accessory chromosomes and their distribution in natural population of Lilium medeoloides A. GRAY Cytologia 23:159–171
Schubert I, Wobus U (1985) In situ hybridization confirms jumping nucleolus organizing regions in Allium. Chromosoma 92:143–148. https://doi.org/10.1007/BF00328466
Son JH (1981) C-banded karyotype of Lilium amabile Plibin. Kor J Genet 2:65–69
Song JT, Jeong HB, Kim BW, Jin HS (1989) The Sauras of Korean resources plants. Ilheung Co. Seoul, pp. 512–513
Stewart RN (1947) Occurrence of aneuploidy in Lillium. Bot Gaz 104:620–626
Sultana S, Lee SH, Bang JW, Choi HW (2010) Physical mapping of rRNA gene loci and inter-specific relationships in wild Lilium distributed in Korea. J Plant Biol 53:433–443
Synge PM (1980) Lilies, L. Batsford, London, UK
Vaio M, Speranza P, Vallas JF, Guerra M, Mazzella C (2005) Localization of the 5S and 45S rDNA sites and cpDNA sequence analysis in species of the Quadrifalia group of Paspalum (Poaceae, Panicoideae). Ann Bot 96:191–200
Valente GT, Conte MA, Fantinatti BEA, Cabrel-de-Mello DC, Carvalho RF, Vicari MR, Kocher TD, Martins C (2014) Origin and evolution of B chromosomes in the cichlid fish Astatotilapia latifasciata based on integrated genomic analyses. Mol Biol Evol 31:2061–2072
Wilson EH (1925) The lilies of Eastern Asia. Dulau & Co. Ltd, London
Acknowledgements
We appreciate to Dr. George Fedak for critical reading and suggestions on the manuscript. This work was carried out a grant of a Golden Seed Project, the Ministry of Agriculture, Food and Rural Affairs, Republic of Korea (Project No. 213007-05-1-SBN10), a grant from the Germplasm Reservation Center Program, Rural Development Administration, Republic of Korea (project PJ010372) to JHK, and a grant from National Research Foundation of Korea to NSK (Project No. C1013144-01-01).
Author information
Authors and Affiliations
Corresponding authors
Additional information
Publisher’s Note
Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
Rights and permissions
About this article
Cite this article
Nguyen, T.X., Kim, B.R., Park, DR. et al. Karyotype and B chromosome variation in Lilium amabile Palibin. Genes Genom 41, 647–655 (2019). https://doi.org/10.1007/s13258-019-00807-9
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s13258-019-00807-9