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The analysis of vegetation-environment relationships by canonical correspondence analysis

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Theory and models in vegetation science

Part of the book series: Advances in vegetation science ((AIVS,volume 8))

Abstract

Canonical correspondence analysis (CCA) is introduced as a multivariate extension of weighted averaging ordination, which is a simple method for arranging species along environmental variables. CCA constructs those linear combinations of environmental variables, along which the distributions of the species are maximally separated. The eigenvalues produced by CCA measure this separation.

As its name suggests, CCA is also a correspondence analysis technique, but one in which the ordination axes are constrained to be linear combinations of environmental variables. The ordination diagram generated by CCA visualizes not only a pattern of community variation (as in standard ordination) but also the main features of the distributions of species along the environmental variables. Applications demonstrate that CCA can be used both for detecting species-environment relations, and for investigating specific questions about the response of species to environmental variables. Questions in community ecology that have typically been studied by ‘indirect’gradient analysis (i.e. ordination followed by external interpretation of the axes) can now be answered more directly by CCA.

Nomenclature follows Heukels-Van der Meijden (1983). Flora van Nederland, 20th ed.

I would like to thank the authors of the example data sets for permission to use their data, Drs M. O. Hill and H. G. Gauch for permission to use the code of the program DECORANA, and Drs I. C. Prentice, L. C. A. Corsten, P. F. M. Verdonschot, P. W. Goedhart and P. F. G. Vereijken for comments on the manuscript.

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References

  • Austin, M. P., 1971. Role of regression analysis in plant ecology. Proc. Ecol. Soc. Austr. 6: 63–75.

    Google Scholar 

  • Austin, M. R, Cunningham, R. B. & Fleming, P. M., 1984. New approaches to direct gradient analysis using environmental scalars and statistical curve-fitting procedures. Vegetatio 55: 11–27.

    Article  Google Scholar 

  • Campbell, N. A. & Atchley, W. R., 1981. The geometry of canonical variate analysis. Syst. Zool. 30: 268–280.

    Article  Google Scholar 

  • Carleton, T. J., 1984. Residual ordination analysis: a method for exploring vegetation-environment relationships. Ecology 65: 469–477.

    Article  Google Scholar 

  • Cramer, W. & Hytteborn, H., 1987. The separation of fluctuation and long-term change in the vegetation dynamics of a rising sea-shore. Vegetatio 69: 157–167.

    Article  Google Scholar 

  • Dargie, T. C. D., 1984. On the integrated interpretation of indirect site ordinations: a case study using semi-arid vegetation in south-eastern Spain. Vegetatio 55: 37–55.

    Article  Google Scholar 

  • Finney, D. J., 1964. Statistical methods in biological assay. Griffin, London, 668 pp.

    Google Scholar 

  • Forsythe, W. L. & Loucks, O. L., 1972. A transformation for species response to habitat factors. Ecology 53: 1112–1119.

    Article  Google Scholar 

  • Gabriel, K. R., 1971. The biplot graphic display of matrices with application to principal component analysis. Biometrika 58: 453–467.

    Article  Google Scholar 

  • Gauch, H. G., 1982. Multivariate analysis in community ecology. Cambridge University Press, Cambridge.

    Google Scholar 

  • Gauch, H. G. & Stone, E. L., 1979. Vegetation and soil pattern in a mesophytic forest at Ithaca, New York. Am. Midl. Nat. 102: 332–345.

    Article  CAS  Google Scholar 

  • Gauch, H. G. & Wentworth, T. R., 1976. Canonical correlation analysis as an ordination technique. Vegetatio 33: 17–22.

    Article  Google Scholar 

  • Gittins, R., 1968. Trend-surface analysis of ecological data. J. Ecol. 56: 845–869.

    Article  Google Scholar 

  • Gittins, R., 1985. Canonical analysis. A review with applications in ecology. Springer Verlag, Berlin.

    Google Scholar 

  • Hill, M. O., 1973. Reciprocal averaging: an eigenvector method of ordination. J. Ecol. 61: 237–249.

    Article  Google Scholar 

  • Hill, M. O., 1979. DECORANA - A FORTRAN program for detrended correspondence analysis and reciprocal averaging. Ecology and Systematics, Cornell University, Ithaca, New York.

    Google Scholar 

  • Hill, M. O. & Gauch, H. G., 1980. Detrended correspondence analysis, an improved ordination technique. Vegetatio 42: 47–58.

    Article  Google Scholar 

  • Israels, A. Z., 1984. Redundancy analysis for qualitative variables. Psychometrika 49: 331–346.

    Article  Google Scholar 

  • Jolliffe, I. T., 1982. A note on the use of principal components in regression. Appl. Statist. 31: 300–303.

    Article  Google Scholar 

  • Loucks, O. L., 1962. Ordinating forest communities by means of environmental scalars and phytosociological indices. Ecol. Monogr. 32: 137–166.

    Article  Google Scholar 

  • Mardia, K. V., Kent, J. T. & Bibby, J. M., 1979. Multivariate analysis. Academic Press, London.

    Google Scholar 

  • Nishisato, S., 1980. Analysis of categorical data: dual scaling and its applications. University of Toronto Press, Toronto.

    Google Scholar 

  • Ter Braak, C. J. F., 1983. Principal components biplots and alpha and beta diversity. Ecology 64: 454–462.

    Article  Google Scholar 

  • Ter Braak, C. J. F., 1985a. Correspondence analysis of incidence and abundance data: properties in terms of a unimodal response model. Biometrics 41: 859–873.

    Article  Google Scholar 

  • Ter Braak, C. J. F., 1985b. CANOCO - A FORTRAN program for canonical correspondence analysis and detrended correspondence analysis. IWIS-TNO, Wageningen, The Netherlands.

    Google Scholar 

  • Ter Braak, C. J. F., 1986. Canonical correspondence analysis: a new eigenvector technique for multivariate direct gradient analysis. Ecology 67: 1167–1179.

    Article  Google Scholar 

  • Ter Braak, C. J. F. & Looman, C. W. N., 1986. Weighted averaging, logistic regression and the Gaussian response model. Vegetatio 65: 3–11.

    Article  Google Scholar 

  • Whittaker, R. H., 1967. Gradient analysis of vegetation. Biol. Rev. 42: 207–264.

    Article  PubMed  CAS  Google Scholar 

  • Yarranton, G. A., 1970. Towards a mathematical model of limestone pavement vegetation. III. Estimation of the determinants of species frequencies. Can. J. Bot. 48: 1387–1404.

    Article  Google Scholar 

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© 1987 Dr W. Junk Publishers, Dordrecht

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Ter Braak, C.J.F. (1987). The analysis of vegetation-environment relationships by canonical correspondence analysis. In: Prentice, I.C., van der Maarel, E. (eds) Theory and models in vegetation science. Advances in vegetation science, vol 8. Springer, Dordrecht. https://doi.org/10.1007/978-94-009-4061-1_7

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  • DOI: https://doi.org/10.1007/978-94-009-4061-1_7

  • Publisher Name: Springer, Dordrecht

  • Print ISBN: 978-94-010-8303-4

  • Online ISBN: 978-94-009-4061-1

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