Abstract
Throughout its life the cotton plant is constantly confronted by microorganisms that may be either beneficial, commensal, or pathogenic. Some of these microbes are endophytes that live in all parts of the plant and are carried from one generation to the next in the seed. Other microbes, including many pathogens, are dormant in the soil until cotton or another suitable host stimulates their regrowth. Other bacteria and fungi in soil are active saprophytes that break down organic matter and also use exudates from the cotton root. Finally, there is a constant fall out of microbes from the air onto the plant surface. It is not uncommon to find microbial populations between one million and one trillion per gram of fresh tissue on either the root or the fiber soon after the boll opens. The cotton plant is exposed to enormous numbers of microbes that can influence its growth and usefulness by affecting nutrient availability; producing plant growth regulators; secreting antibiotics, phytotoxins, and mycotoxins; and invading plant tissues to cause disease.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Preview
Unable to display preview. Download preview PDF.
Bibliography
Armstrong, G.M. and J.K. Armstrong. 1980. Race 6 of the cotton-wilt Fusarium from Paraguay. Plant Disease 64:596.
Ashraf, M. and Z.U. Zafar. 1999. Some physiological characteristics in resistant and susceptible cotton cultivars infected with cotton leaf curl virus. Biologia Plantarum 42:615-620.
Awadalla, O.A. and I.M. El-Refai. 1992. Herbicide-induced resistance of cotton to Verticillium wilt disease and activation of host cells to produce the phytoalexin gossypol. Canadian Journal of Botany 70:1440-1444.
Baird, R. and D. Carling. 1998. Survival of parasitic and saprophytic fungi on intact senescent cotton roots. J. Cotton Science 2:27-34.
Barazani, O. and J. Friedman. 1999. Is IAA the major root growth factor secreted from plant-growth-mediating bacteria? J. Chemical Ecology 25:2397-2406.
Barazani, O. and J. Friedman. 2000. Effect of exogenously applied L-tryptophan on allelochemical activity of plant-growth-promoting rhizobacteria (PGPR). J. Chemical Ecology 26:343-349.
Barrow, J.R. 1969. Cross protection against field infestation of Verticillium wilt. pp.32-33. In: Proc. Cotton Production Research Conf., National Cotton Council, Memphis, Tenn.
Bednarz, C.W. and D.M. Oosterhuis. 1999. Physiological changes associated with potassium deficiency in cotton. J. Plant Nutr. 22:303-313.
Bell, A.A. 1980. The time sequence of defense. pp. 53-73. In: J.G. Horsfall and E.B. Cowling (eds.). Plant Disease: An Advanced Treatise, Vol. V, How Plants Defend Themselves. Academic Press, New York.
Bell, A.A. 1981. Biochemical mechanisms of disease resistance. Annual Review of Plant Physiology 32:21-81.
Bell, A.A. 1982. Plant pest interaction with environmental stress and breeding for pest resistance: Plant diseases. pp. 335-363. In: M.N. Christiansen and C.F. Lewis (eds.). Breeding Plants for Marginal Environments. John Wiley & Sons, Inc., New York.
Bell, A.A. 1983. Physiological responses of plant cells to infection. pp. 47-69. In: R. Moore (ed.). Vegetative Compatibility Responses in Plants. Baylor University Press, Waco, TX.
Bell, A.A. 1986. Physiology of secondary products. pp. 597-621. In: J.R. Mauney and J.McD. Stewart (eds.). Cotton Physiology. The Cotton Foundation, Memphis, Tenn.
Bell, A.A. 1989. Role of nutrition in diseases of cotton. pp. 167-204. In: A.W. Engelhard (ed.). Soilborne Plant Pathogens: Management of Diseases with Macroand Micro-elements. APS Press, St. Paul, MN.
Bell, A.A. 1991. Accumulation of ammonium ions in Verticillium-infected cotton and its relation to strain virulence, cultivar resistance, and symptoms. p. 186. In: Proc. Beltwide Cotton Conferences, National Cotton Council of America, Memphis, Tenn.
Bell, A.A. 1992. Chapter 3, Verticillium wilt. pp. 87-126. In: R.J. Hillocks (ed.). Cotton Diseases. CAB International, Wallingford, UK.
Bell, A.A. 1993. Biology and ecology of Verticillium dahliae. pp. 147-210. In: S.D. Lyda and C.M. Kenerley (eds.). Biology of Sclerotial-Forming Fungi. Texas A and M University Press, College Station, TX.
Bell, A.A. 1995a. Mechanisms of diseases resistance in Gossypium species and variation in Verticillium dahliae. pp. 225-235. In: G.A. Constable and N.W. Forrester (eds.). Challenging the Future: Proceedings of the World Cotton Research Conferences – 1. CSIRO, Melbourne, Australia.
Bell, A.A. 1995b. Genetic variation among Fusarium oxysporum isolates from the Regional Wilt Nursery at Shorter, Alabama. pp. 216-217. In: Proc. Beltwide Cotton Conferences, Volume 1, National Cotton Council of America, Memphis, Tenn.
Bell, A.A. 1999a. Chapter 3.4, Diseases of cotton. pp. 553-593. In: C.W. Smith and J.T. Cothren (eds.). Cotton: Origin, History, Technology, and Production. John Wiley & Sons, Inc., New York, NY.
Bell, A.A. 1999b. Agrobacterium bronzing and wilt: Cultivar reactions and effects of temperature. pp. 117-120. In: Proc. Beltwide Cotton Conferences, National Cotton Council of America, Memphis, Tenn.
Bell, A.A. 2000a. Synergism between Rhizoctonia solani and Agrobacterium tumefaciens in causing crown gall of cotton. pp. 175-177. In: Proc. Beltwide Cotton Conferences, National Cotton Council of America, Memphis, Tenn.
Bell, A.A. 2000b. Role of Agrobacterium in bronze wilt of cotton. pp. 154-160. In: Proc. Beltwide Cotton Conferences, National Cotton Council of America, Memphis, Tenn.
Bell, A.A. 2000c. Variability and heritability of bronze wilt resistance in cotton cultivars. pp. 138-144. In: Proc. Beltwide Cotton Conferences, National Cotton Council of America, Memphis, Tenn.
Bell, A.A. and K. Decker. 1993. Relationships among vegetative compatibility, race designation, and virulence in isolates of Fusarium oxysporum f.sp. vasinfectum from cotton in the USA. p. 221. In: Proc. Beltwide Cotton Conferences, Volume 1, National Cotton Council of America, Memphis, Tenn.
Bell, A.A. and M.E. Mace. 1981. Biochemistry and physiology of resistance. pp. 431-486. In: M.E. Mace, A.A. Bell, and C.H. Beckman (eds.). Fungal Wilt Diseases of Plants. Academic Press, New York.
Bell, A.A. and J.T. Presley. 1969a. Heat-inhibited or heatkilled conidia of Verticillium albo-atrum induce disease resistance and phytoalexin synthesis in cotton. Phytopathology 59:1147-1151.
Bell, A.A. and J.T. Presley. 1969b. Temperature effects upon resistance and phytoalexin synthesis in cotton inoculated with Verticillium albo-atrum. Phytopathology 59:1141-1146.
Bell, A.A. and R.D. Stipanovic. 1977. The chemical composition, biological activity, and genetics of pigment glands in cotton. pp. 244-258. In: Proc. Beltwide Cotton Production Research Conf., National Cotton Council, Memphis, Tenn.
Bell, A.A. and R.D. Stipanovic. 1978. Biochemistry of disease and pest resistance in cotton. Mycopathologia 65:91-106.
Bell, A.A. and M.H. Wheeler. 1986. Biosynthesis and functions of fungal melanins. Annual Review of Phytopathology 24:411-451.
Borkar, S.G. and J.P. Verma. 1991. Inhibition of susceptible water soaking and/or hypersensitive reaction in cotton by exopolysaccharide of avirulent Xanthomonas campestris pv. malvacearum. Folia Microbiologia 36:173-176.
Brannen, P.M. and P.A. Backman. 1994b. Suppression of Fusarium wilt of cotton with Bacillus subtilis hopper box formulations. pp. 83-85. In: M.H. Ryder, P.M. Stephens, and G.D. Bowen (eds.). Improving Plant Productivity with Rhizosphere Bacteria, Third International Workshop On Plant Growth-Promoting Rhizobacteria. CSIRO, East Melbourne, Victoria, Australia.
Brinkerhoff, L.A. 1970. Variation in Xanthomonas malvacearum and its relation to control. Ann. Rev. Phytopathology 8:85-110.
Burr, T.J. and L. Otten. 1999. Crown gall of grape: Biology and disease management. Ann. Rev. Phytopathology 37:53-80.
Cassman, K.G. 1993. Cotton. In: W.F. Bennett (ed.). Nutrient deficiencies and toxicities in crop plants. American Phytopathological Society, APS Press, St. Paul, MN. pp. 111-119.
Cauquil, J. 1975. Cotton Boll Rot: Laying Out a Trial of a Method of Control. Amerina, New Delhi. 143Â pp.
Chan, B.G. 1985. From L-phenylalanine to condensed tannins: A brief review of tannin chemistry and biochemistry and a report on its distribution in cotton plant parts. pp. 49-52. In: W.P. Wakelyn and R.R. Jacobs (eds.). Proc. Ninth Cotton Dust Conference, National Cotton Council of America, Memphis, Tenn.
Charudattan, R. and J.E. DeVay. 1972. Common antigens among varieties of Gossypium hirsutum and isolates of Fusarium and Verticillium species. Phytopathology 62:230-234.
Charudattan, R. and J.E. DeVay. 1981. Purification and partial characterization of an antigen from Fusarium oxysporum f.sp. vasinfectum that cross-reacts with antiserum to cotton (Gossypium hirsutum) root antigens. Physiological Plant Pathology 18:289-295.
Colyer, P.D. and P.R. Vernon. 1991. Effect of thrips infestation on the development of cotton seedling diseases. Plant Disease 75:380-382.
Cotty, P.J. 1987. Temperature-induced suppression of Alternaria leaf spot of cotton in Arizona. Plant Disease 71:1138-1140.
Cotty, P.J. 1989. Virulence and cultural characteristics of two Aspergillus flavus strains pathogenic on cotton. Phytopathology 79:808-814.
Cotty. P.J. 1994. Influence of field application of an atoxigenic strain of Aspergillus flavus on the populations of A. flavus infecting cotton bolls and on aflatoxin content of cottonseed. Phytopathology 84:1270-1277.
Cotty, P.J. and P. Bayman. 1993. Competitive exclusion of a toxigenic strain of Aspergillus flavus by an atoxigenic strain. Phytopathology 83:1283-1287.
Davis, G.D. and M. Essenberg. 1995. (+)-δ-cadinene is a product of sesquiterpene cyclase activity in cotton. Phytochemistry 39:553-567.
DeVay, J.E. 1989. Physiological and biochemical mechanisms in host resistance and susceptibility to wilt pathogens. pp. 197-217. In: E.C. Tjamos and C.H. Beckman (eds.). Vascular Wilt Diseases of Plants. NATO ASI Series H: Cell Biology, Volume 28, Springer-Verlag, New York.
Dubery, I.A. and V. Slater. 1997. Induced defense responses in cotton leaf discs by elicitors from Verticillium dahliae. Phytochemistry 44:1429-1434.
Dubery, I.A. and F. Smit. 1994. Phenylalanine ammonia-lyase from cotton (Gossypium hirsutum) hypocotyls: Properties of the enzyme induced by a Verticillium dahliae phytotoxin. Biochimica et Biophysica Acta 1207:24-30.
Eldon, S. and R.J. Hillocks. 1996. The effect of reduced phytoalexin production on the resistance of Upland cotton (Gossypium hirsutum) to Verticillium and Fusarium wilts. Annals of Applied Biology 129:217-225.
Elena, K. 1999. Genetic relationships among Verticillium dahliae isolates from cotton in Greece based on vegetative compatibility. European J. Plant Pathology 105:609-616.
Essenberg, M. and M.L. Pierce. 1995. Sesquiterpenoid phytoalexins synthesized in cotton leaves and cotyledons during the hypersensitive response to Xanthomonas campestris pv. malvacearum. pp. 183-198. In: M. Daniel and P.R. Purkayastha (eds.). Handbook of Phytoalexin Metabolism and Action. Marcel Decker, New York.
Halloin, J.M. 1982. Localization and changes in catechin and tannins during development and ripening of cottonseed. New Phytologist 90:651-657.
Halloin, J.M. and A.A. Bell. 1979. Production of nonglandular terpenoid aldehydes within diseased seeds and cotyledons of Gossypium hirsutum L. J. Agric. and Food Chemistry 27:1407-1409.
Hartman, K.M. and J.N. Sasser. 1985. Identification of Meloidogyne species on the basis of differential host test and perineal pattern morphology. pp. 69-77. In: K.R. Barker (ed.). An Advanced Treatise on Meloidogyne, Volume 2, Methodology, North Carolina State University Graphics, Raleigh, NC.
Hedin, P.A. and R.G. Creech. 1998. Altered amino acid metabolism in root-knot nematode inoculated cotton plants. J. Agric. and Food Chemistry 46:4413-4415.
Hillocks, R.J. 1986. Cross protection between strains of Fusarium oxysporum f.sp. vasinfectum and its effect on vascular resistance mechanisms. J. Phytopathology 117:216-225.
Hillocks, R.J. (ed.). 1992. Cotton Diseases. CAB International. Wallingford, UK. 415Â pp.
Hodges, S.C. 1992. Nutrient Deficiency Disorders. In: R. Hillocks (ed.). Cotton Diseases. CAB International, Wallinford UK. pp. 355-403.
Howell, C.R. 1987. Relevance of mycoparasitism in the biological control of Rhizoctonia solani by Gliocladium virens. Phytopathology 77:992-994.
Howell, C.R. 1991. Biological control of Pythium damping- off of cotton with seed-coating preparations of Gliocladium virens. Phytopathology 81:738-741.
Howell, C.R. and R.D. Stipanovic. 1979. Control of Rhizoctonia solani on cotton seedlings with Pseudomonas fluorescens and with an antibiotic produced by the bacterium. Phytopathology 69:480-482.
Howell, C.R. and R.D. Stipanovic. 1984. Phytotoxicity to crop plants and herbicidal effects on weeds of viridiol produced by Gliocladium virens. Phytopathology 74:1346-1349.
Howell, C.R. and R.D. Stipanovic. 1994. Effect of sterol biosynthesis inhibitors on phytotoxin (viridiol) production by Gliocladium virens in culture. Phytopathology 84:969-972.
Howell, C.R. and R.D. Stipanovic. 1995. Mechanisms in the biocontrol of Rhizoctonia solani-induced cotton seedling disease by Gliocladium virens: Antibiosis. Phytopathology 85:469-472.
Hu, Z.J. and X.D. Gui. 1991. Pretransplant inoculation with VA mycorrhizal fungi and Fusarium blight of cotton. Soil Biology and Biochemistry 23:201-203.
Hussain, T. and L.A. Brinkerhoff. 1978. Race 18 of the cotton bacterial blight pathogen, Xanthomonas malvacearum, identified in Pakistan in 1977. Plant Disease Reporter 62:1085-1087.
Hutcheson, S. 1998. Current concepts of active defense in plants. Ann. Rev. Phytopathology 36:59-90.
Jones, M.A. and C.E. Snipes. 1999. Tolerance of transgenic cotton to topical applications of glyphosate. J. Cotton Science 3:19-26.
Katan, T. and J. Katan. 1988. Vegetative compatibility grouping of Fusarium oxysporum f.sp. vasinfectum from tissue and the rhizosphere of cotton plants. Phytopathology 78:852-855.
Kohel, R.J. and A.A. Bell. 1999. Genetic analysis of two terpenoid variants in cotton (Gossypium hirsutum L.). Journal of Heredity 90:249-251.
Liu, R.J. 1995. Effect of vesicular-arbuscular mycorrhizal fungi on Verticillium wilt of cotton. Mycorrhizia 5:293-297.
Matthysse, A.G. and S. McMahan. 1998. Root colonization by Agrobacterium tumefaciens is reduced in cel, att B, att D, and att R mutants. Applied and Environmental Microbiology 64:2341-2345.
Mueller, W.C. and C.H. Beckman. 1976. Ultrastructure and development of phenolic-storing cells in cotton roots. Canadian J. Botany 54:2074-2082.
Mueller, W.C. and A.T. Morgham. 1993. Ultrastructure of the vascular response of cotton to Verticillium dahliae. Canadian J. Botany 71:32-36.
Nelson, E.B. 1987. Biological control of Pythium seed rot and pre-emergence damping-off of cotton with Enterobacter cloacae and Erwinia herbicola applied as seed treatments. Plant Disease 71:140-142.
Nirenberg, H.I. 1996. Evaluation of the systematic position of Fusarium oxysporum f.sp. vasinfectum – Morphological, phytopathologic, and molecular experiments with 8 races. pp. 10. In: Proc. First International Fusarium Biocontrol Workshop, October 28-31, 1996, College Park, MD.
Papdiwal, P.B. and K.B. Deshpande. 1983. Pectin methylesterase of Xanthomonas campestris pv. malvacearum. Indian Phytopathology 36:134-135.
Pettigrew, W.T. 1999b. Potassium deficiency increases specific leaf weights and leaf glucose levels in fieldgrown cotton. Agronomy Journal 91:962-968.
Puhalla, J.E. and A.A. Bell. 1981. Genetics and biochemistry of wilt pathogens. pp. 145-192. In: M.E. Mace, A.A. Bell, and C.H. Beckman (eds.). Fungal Wilt Diseases of Plants. Academic Press, New York.
Puhalla, J.E. and C.R. Howell. 1975. Significance of endopolygalacturonase activity to symptom expression of Verticillium wilt of cotton, assessed by the use of mutants of Verticillium dahliae Kleb. Physiological Plant Pathology 7:147-152.
Puhalla, J.E. and M. Hummel. 1983. Vegetative compatibility groups within Verticillium dahliae. Phytopathology 73:1305-1308.
Robinson, A.F. 1999. Chapter 3.5 – Cotton nematodes. pp. 595-615. In: C.W. Smith and J.T. Cothren (eds.). Cotton: Origin, History, Technology, and Production. John Wiley & Sons, Inc., New York, NY.
Robinson, A.F. and C.M. Heald. 1991. Carbon dioxide and temperature gradients in Baermann funnel extraction of Rotylenchulus reniformis. J. Nematology 23:28-38.
Rohmer, M. 1999. The discovery of a mevalonate-independent pathway for isoprenoid biosynthesis in bacteria, algae and higher plants. Natural Products Report 16:565-574.
Rothrock, C.S. 1992. Influence of soil temperature, water and texture on Thielaviopsis basicola and black root rot of cotton. Phytopath. 82:1202-1206.
Ruttledge, T.R. and E.B. Nelson. 1997. Extracted fatty acids from Gossypium hirsutum stimulatory to the seedrotting fungus, Pythium ultimum. Phytochemistry 46:77-82.
Ryser, U. 1992. Ultrastructure of the epidermis of developing cotton (Gossypium) seeds: Suberin, pits, plasmodesmata, and their implications for assimilate transport into cotton fibers. Am. J. Bot. 79:14-22.
Ryser, U. and P.J. Holloway. 1985. Ultrastructure and chemistry of soluble and polymeric lipids in cell walls from seed coats and fibres of Gossypium species. Planta 163:151-163.
Saleh, H. and R.A. Sikora. 1984. Relationship between Glomus fasciculatum root colonization of cotton and its effect on Meloidogyne incognita. Nematologica 30:230-237.
Schnathorst, W.C. and D.C. Mathre. 1966. Cross protection with a fungus – Verticillium albo-atrum. Phytopathology 56:1204-1208.
Shen, C.-Y. 1985. Integrated management of Fusarium and Verticillium wilts of cotton in China. Crop Protection 4:337-345.
Sikora, R.A. and K. Sitaramaiah. 1980. Antagonistic interaction between the endotrophic mycorrhizal fungus Glomus mosseae and Rotylenchulus reniformis on cotton. Nematropica 10:72-73.
Smit, F. and I.A. Dubery. 1997. Cell wall reinforcement in cotton hypocotyls in response to a Verticillium dahliae elicitor. Phytochemistry 44:811-815.
Snyder, W.C. and H.N. Hansen. 1940. The species concept in Fusarium. American Journal of Botany 27:64-67.
Song, F. and Z. Zheng. 1997. Involvement of gossypol and tannin in the resistance of cotton seedlings to Fusarium wilt. Journal of Zhejiang Agricultural University 23:529-532.
Song, F.-M. and Z. Zheng. 1998. The correlation between inhibition of ethylene production and trifluralininduced resistance of cotton seedlings against Fusarium oxysporum f.sp. vasinfectum. Acta Phytophysiologica Sinica 24:111-118.
Starr, J.L. 1998. Cotton. pp. 359-379. In: K.R. Barker, G.A. Pederson, and G.L. Windham (eds.). Plant and Nematode Interactions, Agronomy Monograph No. 36, American Society of Agronomy, Madison, WI.
Starr, J.L. and J.A. Veech. 1986. Comparison of development, reproduction, and aggressiveness of Meloidogyne incognita race 3 and 4 on cotton. Journal of Nematology 18:413-415.
Strand, L.L. and H. Mussell. 1975. Solubilization of peroxidase activity from cotton cell walls by endopolygalacturonases. Phytopathology 65:830-831.
Veech, J.A. 1979. Histochemical localization and nematoxicity of terpenoid aldehydes in cotton. J. Nematology 11:240-246.
Veech, J.A. 1982. Phytoalexins and their role in the resistance of plants to nematodes. J. Nematology 14:2-9.
Veech, J.A. 1984. Cotton protection practices in the USA and world. Section C: Nematodes. pp. 309-330. In: R.J. Kohel and C.F. Lewis (eds.). Cotton. Agronomy Monograph No. 24, American Society of Agronomy, Inc., Madison, WI.
Venere, R.J. 1980. Role of peroxidase in cotton resistance to bacterial blight. Plant Science Letters 20:47-56.
Venere, R.J. and L. Brinkerhoff. 1974. The role of pectinolytic enzymes in the production of a necrotic lesion in cotton bacterial blight. Proc. American Phytopathological Society 1:78.
Wallace, T.P. and K.M. El-Zik. 1989. Inheritance of resistance in three cotton cultivars to the HV1 isolate of bacterial blight. Crop Science 29:1114-1119.
Wang, S.-Y.C. and J.A. Pinckard. 1972. Some biochemical factors associated with the infection of cotton fruit by Diplodia gossypina. Phytopathology 62:460-465.
Wiese, M.V. and J.E. DeVay. 1970. Growth regulator changes in cotton associated with defoliation caused by Verticillium dahliae. Plant Physiology 45:304-309.
Wright, P.R. 1999. Premature senescence of cotton (Gossypium hirsutum L.) – Predominately a po tassium deficiency disorder caused by an imbalance of source and sink. Plant and Soil 211:231-239.
Xu, X.Q. and S.Q. Pan. 2000. An Agrobacterium catalase is a virulence factor involved in tumorigenesis. Molecular Microbiology 35:407-414.
Yang, Y. and D.W. Gabriel. 1992. Functional analysis of avirulence genes in Xanthomonas campestris pv. malvacearum. Phytopathology 82:1167.
Zeringue, H.J., Jr. 1988. Production of carpel wall phytoalexins in the developing cotton boll. Phytochemistry 27:3429-3431.
Zeringue, H.J., Jr. 1990. Stress effects on cotton leaf phytoalexins elicited by cell-free-mycelia extracts of Aspergillus flavus. Phytochemistry 29:1789-1791.
Zhang, J. 1995. Identification and Pathogenicity of Fusarium Species Associated with Cotton Seedling Roots, and Their Interactions with Biocontrol Agents and Other Soil-borne Pathogens. Ph. D. Thesis, Texas A&M University, College Station. 99Â pp.
Author information
Authors and Affiliations
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2010 Springer Science+Business Media B.V.
About this chapter
Cite this chapter
Bell, A., Howell, C., Stipanovic, R. (2010). Cotton Host-Microbe Interactions. In: Stewart, J.M., Oosterhuis, D.M., Heitholt, J.J., Mauney, J.R. (eds) Physiology of Cotton. Springer, Dordrecht. https://doi.org/10.1007/978-90-481-3195-2_18
Download citation
DOI: https://doi.org/10.1007/978-90-481-3195-2_18
Publisher Name: Springer, Dordrecht
Print ISBN: 978-90-481-3194-5
Online ISBN: 978-90-481-3195-2
eBook Packages: Biomedical and Life SciencesBiomedical and Life Sciences (R0)