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Diversity of Industrially Relevant Microbes

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Applied Microbiology
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Abstract

This chapter shall discuss how existence of microbes in different ecological niches can be exploited for the processes and production of industrial products and bioproducts. The different physico-chemical or geological conditions in which the microbes exist and their possible exploitation. Emphasis would be on plant–microbe, microbe–microbe interaction and animal–microbe interaction.

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Selected Reading

  • Aly AH, Debbab A, Kjer J, Proksch P (2010) Fungal endophytes from higher plants: a prolific source of phytochemicals and other bioactive natural products. Fungal Divers 41:1–16

    Article  Google Scholar 

  • Amna T, Puri SC, Verma V, Sharma JP, Khajuria RK et al (2006) Bioreactor studies on the endophytic fungus Entrophospora infrequens for the production of an anticancer alkaloid camptothecin. Can J Microbiol 52:189–196

    Article  CAS  PubMed  Google Scholar 

  • Bringmann G, Lang G, Mühlbacher J, Schaumann K, Steffens S, Rytik PG, Hentschel U, Morschhäuser J, Müller WE (2003) Sorbicillactone A: a structurally unprecedented bioactive novel-type alkaloid from a sponge-derived fungus. Prog Mol Subcell Biol 37:231–253

    Article  CAS  PubMed  Google Scholar 

  • Castillo U, Harper JK, Strobel GA, Sears J, Alesi K, Ford E, Lin J, Hunter M, Maranta M, Ge H, Yaver D, Jensen JB, Porter H, Robison R, Millar D, Hess WM, Condron M, Teplow D (2003) Kakadumycins, novel antibiotics from Streptomyces sp NRRL 30566, an endophyte of Grevillea pteridifolia. FEMS Microbiol Lett 224(2):183–190

    Article  CAS  PubMed  Google Scholar 

  • Egan S, James S, Holmström C, Kjelleberg S (2001) Inhibition of algal spore germination by the marine bacterium Pseudoalteromonas tunicata. FEMS Microbiol Ecol 35:67–73

    Article  CAS  PubMed  Google Scholar 

  • Erba E, Bergamaschi D, Ronzoni S, Faretta M, Taverna S, Bonfanti M, Catapano CV, Faircloth G, Jimeno J, D’Incalci M (1999) Mode of action of thiocoraline, a natural marine compound with anti-tumour activity. Br J Cancer 80:971–980

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Etemadi O, Petrisor IG, Kim D, Wan MW, Yen TF (2003) Stabilization of metals in subsurface by biopolymers: laboratory drainage flow studies. Soil Sediment Contam 12:647–661

    Article  CAS  Google Scholar 

  • Franks A, Egan S, Holmstrom C, James S, Lappin-Scott H, Kjelleberg S (2006) Inhibition of fungal colonization by Pseudoalteromonas tunicata provides a competitive advantage during surface colonization. Appl Environ Microbiol 72:6079–6087

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Gioia F, Ciriello PP (2006) The containment of oil spills in porous media using xanthan/aluminium solutions, gelled by gaseous CO2 or by AlCl3 solutions. J Hazard Mater 138:500–506

    Article  CAS  PubMed  Google Scholar 

  • Gunatilaka AAL (2006) Natural products from plant-associated microorganisms: distribution, structural diversity, bioactivity, and implications of their occurrence. J Nat Prod 69:509–526

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Harrison LH, Teplow DB, Rinaldi M, Strobel G (1991) Pseudomycins, a family of novel peptides from Pseudomonas syringae possessing broad-spectrum antifungal activity. J Gen Microbiol 137:2857–2865

    Article  CAS  PubMed  Google Scholar 

  • He H, Ding WD, Bernan VS, Richardson AD, Ireland CM, Greenstein M, Ellestad GA, Carter GT (2001) Lomaiviticins A and B, potent antitumor antibiotics from Micromonospora lomaivitiensis. J Am Chem Soc 123:5362–5363

    Article  CAS  PubMed  Google Scholar 

  • Holler U, Konig G, Wright AD (1999) A new tyrosine kinase inhibitor from a marine isolate of Ulocladium botrytis and new metabolites from the marine fungi Asteromyces cruciatus and Varicosporina ramulosa. Eur J Org Chem 11:2949–2955

    Article  Google Scholar 

  • Holmström C, Kjelleberg S (1998) Marine Pseudoalteromonas species are associated with higher organisms and produce biologically active extracellular agents. FEMS Microbiol Ecol 30:285–293

    Article  Google Scholar 

  • Jadulco R, Proksch P, Wray V, Sudarsono, Berg A, Berg A (2001) New macrolides and furan carboxylic acid derivative from the sponge-derived fungus Cladosporium herbarum. J Nat Prod 64:527–530

    Article  CAS  PubMed  Google Scholar 

  • Kopke B, WIlms R, Engelen B, Cypionka H, Sass H (2005) Microbial diversity in coastal subsurface sediments: a cultivation approach using various electron acceptors and substrate gradients. Appl Environ Microbiol 71(12):7819–7830

    Article  PubMed Central  PubMed  Google Scholar 

  • Kour A, Shawl AS, Rehman S, Sultan P, Qazi PH, Suden P, Khajuria RK, Verma V (2008) Isolation and identification of an endophytic strain of Fusarium oxysporum producing podophyllotoxin from Juniperus recurva. World J Microbiol Biotechnol 24:1115–1121

    Article  CAS  Google Scholar 

  • Lingqi Z, Guo B, Li H, Zeng S, Shao H, Gu S, Wei R (2000) Preliminary study on the isolation of the endophytic fungus of Catharanthus roseus and its fermentation to produce products of therapeutic value. Chin. Trad. Chin Tradit Herb Drugs 31:805–807

    Google Scholar 

  • Lugtenberg B, Chin-A-Woeng T, Bloemberg G (2002) Microbe-plant interactions: principles and mechanisms. Antonie Van Leeuwenhoek 81:373–383

    Article  CAS  PubMed  Google Scholar 

  • Marlida Y, Saari N, Hassan Z, Radu S, Bakar J (2000) Purification and characterization of sago starch-degrading glucoamylase from Acremonium sp. endophytic fungus. Food Chem 71:221–227

    Article  CAS  Google Scholar 

  • Momemi D, Kamel R, Martin R, Yen TF (1999) Potential use of biopolymer grouts for liquefaction mitigation. In: Leeson A, Alleman BC (eds) Phytoremediation and innovation strategies for specialized remedial applications. Batelle Press, Columbus, pp 175–18

    Google Scholar 

  • Motyl MR, Tan C, Liberator P et al (2010) MK-3118, an oral enfumafungin with potent in vitro activity against Candida and Aspergillus spp. In: Abstracts of the fiftieth interscience conference on antimicrobial agents and chemotherapy, Boston, MA, 2010. Abstract F1-847. American Society for Microbiology, Washington, DC, USA

    Google Scholar 

  • Okami Y, Okazaki T, Kitahara T, Umezawa H (1976) Studies on marine microorganisms. V. A new antibiotic, aplasmomycin produced by a streptomycete isolated from shallow sea mud. J Antibiot 29(10):1019–1025

    Article  CAS  PubMed  Google Scholar 

  • Ondeyka JG, Helms GL, Hensens OD, Goetz MA, Zink DL, Tsipouras A, Shoop WL, Slayton L, Dombrowski AW, Polishook JD, Ostlind DA, Tsou NN, Ball RG, Singh SB (1997) Nodulisporic acid A, a novel and potent insecticide from a Nodulisporium sp. isolation, structure determination, and chemical transformations. J Am Chem Soc 119:8809–8816

    Article  CAS  Google Scholar 

  • Oren A (2002) Diversity of halophilic microorganisms: environments, phylogeny, physiology, and applications. J Ind Microbiol Biotechnol 28:56–63

    Article  CAS  PubMed  Google Scholar 

  • Penesyan A, Kjelleberg S, Egan S (2010) Development of novel drugs from marine surface associated microorganisms. Mar Drugs 8:438–459

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Staniek A, Woerdenbag HJ, Kayser O (2008) Endophytes: exploiting biodiversity for the improvement of natural product-based drug discovery. J Plant Interact 3:75–93

    Article  CAS  Google Scholar 

  • Stierle A, Strobel G, Stierle D (1993) Taxol and taxane production by Taxomyces andreanae, an endophytic fungus of Pacific yew. Science 260:214–216

    Article  CAS  PubMed  Google Scholar 

  • Stierle A, Strobel G, Stierle D, Grothaus P, Bignami G (1995) The search for a taxol-producing microorganism among the endophytic fungi of the Pacific yew, Taxus brevifolia. J Nat Prod 58:1315–1324

    Article  CAS  PubMed  Google Scholar 

  • Torres M, Dolcet MM, Sala N, Canela R (2003) Endophytic fungi associated with Mediterranean plants as a source of mycelium-bound lipases. J Agric Food Chem 51:3328–3333

    Article  CAS  PubMed  Google Scholar 

  • Verma VC, Gond SK, Mishra A, Kumar A, Kharwar RN, Gange AC (2009) Endophytic actinomycetes from Azadirachta indica A. Juss.: isolation, diversity and anti-microbial activity. Microb Ecol 57:749–756

    Article  PubMed  Google Scholar 

  • Wallace TC, Guarner F, Madsen K, Cabana MD, Gibson GR, Hentges E, Sanders ME (2011) Human gut microbiota and its relationship to health and disease. Nutr Rev 69(7):392–403

    Article  PubMed  Google Scholar 

  • Wijeratne EMK, Paranagama PA, Marron MT, Gunatilaka MK, Arnold AE, Gunatilaka AAL (2008) Sesquiterpene quinines and related metabolites from Phyllosticta spinarum, a fungal strain endophytic in Platycladus orientalis of the sonorant desert. J Nat Prod 71:218–222

    Article  CAS  PubMed  Google Scholar 

  • Wood EJF (1959) Some aspects of marine microbiology. J Mar Biol Assoc India 1:26–32

    Google Scholar 

  • Zhang B, Salituro G, Szalkowski D, Li Z, Zhang Y et al (1999) Discovery of small molecule insulin mimetic with antidiabetic activity in mice. Science 284:974–977

    Article  CAS  PubMed  Google Scholar 

  • Zobell CE (1946) Marine microbiology. Chronica Botanica, Waltham

    Google Scholar 

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Saxena, S. (2015). Diversity of Industrially Relevant Microbes. In: Applied Microbiology. Springer, New Delhi. https://doi.org/10.1007/978-81-322-2259-0_1

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