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Insertions and duplications of mtDNA in the nuclear genomes of Old World monkeys and hominoids

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Abstract

USING oligonucleotide primers designed to match conserved regions of mammalian mitochondrial DNA (mtDNA)1, we have amplified and sequenced two divergent cytochrome b nuclear pseudogenes from orangutan cellular DNA. Evolutionary analysis suggests that a nuclear transfer occurred about 30 million years ago on the lineage leading to the catarrhines (Old World monkeys and hominoids), and involved a long (at least 3 kilobases), probably damaged, piece of mtDNA. After this transfer, the pseudogene duplicated, giving rise to the two copies that are probably present in all hominoids, including humans. More recent transfers involving the entire cytochrome b gene have also occurred in the Old World monkeys. Such nuclear copies of mtDNA can confound phylo-genetic and population genetic studies2–4, and be an insidious source of DNA contamination of 'ancient'3,5 and forensic DNA. Indeed, contamination with these anciently transferred human pseudogenes5 is almost certainly the source of the cytochrome b sequences recently reported from 'dinosaur bone 'DNA'6.

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References

  1. Kocher, T. D. et al. Proc. natn. Acad. Sci. U.S.A. 86, 6196–6200 (1989).

    Article  ADS  CAS  Google Scholar 

  2. Smith, M. F., Thomas, W. K. & Patton, J. L. Molec. Biol. Evol. 9, 204–215 (1992).

    CAS  PubMed  Google Scholar 

  3. van der Kuyl, A. C., Kuiken, C. L., Dekker, J. T., Perizonius, W. R. K. & Goudsmit, J. J. molec. Evol. 40, 652–657 (1995).

    Article  ADS  CAS  Google Scholar 

  4. Quinn, T. W. Molec. Ecol. 1, 105–117 (1992).

    Article  CAS  Google Scholar 

  5. Zischler, H. et al. Science 268, 1192–1193 (1995).

    Article  CAS  Google Scholar 

  6. Woodward, S. R., Weyand, N. J. & Bunnell, M. Science 266, 1229–1232 (1994).

    Article  ADS  CAS  Google Scholar 

  7. Mullis, K. B. et al. Cold Spring Harbor Symp. quant. Biol. 51, 263–273 (1986).

    Article  CAS  Google Scholar 

  8. Wrischnik, L. A. et al. Nuclelc Acids Res. 15, 529–542 (1987).

    Article  CAS  Google Scholar 

  9. Cohen, J. Science 268, 22–23 (1995).

    Article  ADS  CAS  Google Scholar 

  10. Ausubel, F. M. et al. Current Protocols in Molecular Biology (Wiley. New York, 1989).

    Google Scholar 

  11. Horai, S., Hayasaka, K., Kondo, R., Tsugane, K. & Takahata, N. Proc. natn. Acad. Sci. U.S.A. 92, 532–536 (1995).

    Article  ADS  CAS  Google Scholar 

  12. Li, W.-H., Ellsworth, D. L., Krushkal, J., Chang, B. H.-J. & Hewett-Emmett, D. Molec. phylogenet. Evol. (in the press).

  13. Saitou, N. & Ueda, S. Molec. Biol. Evol. 11, 504–512 (1994).

    CAS  PubMed  Google Scholar 

  14. Brown, W. M., Prager, E. M., Wang, A. & Wilson, A. C. J. molec. Evol. 18, 225–239 (1982).

    Article  ADS  CAS  Google Scholar 

  15. Lopez, J. V., Yuhki, N., Masuda, R., Modi, W. & O'Brien, S. J. J. molec. Evol. 39, 174–190 (1994).

    CAS  PubMed  Google Scholar 

  16. Zullo, S., Sieu, L. C., Slightom, J. L., Hadler, H. I. & Eisenstadt, J. M. J. molec. Biol. 221, 1223–1235 (1991).

    CAS  PubMed  Google Scholar 

  17. Shay, J. W. & Werbin, H. Mutat. Res. 275, 227–235 (1992).

    Article  CAS  Google Scholar 

  18. Hu, G. & Thilly, W. G. Gene 147, 197–204 (1994).

    Article  CAS  Google Scholar 

  19. Fukuda, M. et al. J. molec. Biol. 186, 257–266 (1985).

    Article  CAS  Google Scholar 

  20. van der Kuyl, A. C., Kuiken, C. L., Dekker, J. T. & Goudsmit, J. J. molec. Evol. 40, 173–180 (1995).

    Article  ADS  CAS  Google Scholar 

  21. Hedges, S. B. & Schweitzer, M. H. Science 268, 1191–1192 (1995).

    Article  ADS  CAS  Google Scholar 

  22. Woodward, S. R. Science 268, 1194 (1995).

    Article  CAS  Google Scholar 

  23. Handt, O., Höss, M., Krings, M. & Pääbo, S. Experientia 50, 524–529 (1994).

    Article  CAS  Google Scholar 

  24. Anderson, S. et al. Nature 290 457–465 (1981).

    Article  ADS  CAS  Google Scholar 

  25. Gustincich, S., Manfioletti, G., Del Sal, G., Schneider, C. & Carninci, P. BioTechniques 11, 298–302 (1991).

    CAS  PubMed  Google Scholar 

  26. Felsenstein, J. PHYLIP {Phylogeny Inference Package) Version 3.5c (Department of Genetics, University of Washington, Seattle. 1994).

    Google Scholar 

  27. Swofford, D. L. PAUP: Phylogenetic Analysis Using Parsimony Version 3.1 (Illinois Natural History Survey. Champaign, IL, 1993).

    Google Scholar 

  28. Maddison, W. P. & Maddison, D. R. MacClade: Analysis of Phylogeny and Character Evolution Version 3.04 (Sinauer, Sunderland, MA, 1994).

    MATH  Google Scholar 

  29. Gingerich, P. D. Molec. Biol. Evol. 3, 205–221 (1986).

    CAS  PubMed  Google Scholar 

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Collura, R., Stewart, CB. Insertions and duplications of mtDNA in the nuclear genomes of Old World monkeys and hominoids. Nature 378, 485–489 (1995). https://doi.org/10.1038/378485a0

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  • DOI: https://doi.org/10.1038/378485a0

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