Abstract
Recently, several experiments have demonstrated the existence of fractional diffusion in the neuronal transmission occurring in the Purkinje cells, whose malfunctioning is known to be related to the lack of voluntary coordination and the appearance of tremors. Also, a classical mathematical feature is that (fractional) parabolic equations possess smoothing effects, in contrast with the case of hyperbolic equations, which typically exhibit shocks and discontinuities. In this paper, we show how a simple toy-model of a highly ramified structure, somehow inspired by that of the Purkinje cells, may produce a fractional diffusion via the superposition of travelling waves that solve a hyperbolic equation. This could suggest that the high ramification of the Purkinje cells might have provided an evolutionary advantage of “smoothing” the transmission of signals and avoiding shock propagations (at the price of slowing a bit such transmission). Although an experimental confirmation of the possibility of such evolutionary advantage goes well beyond the goals of this paper, we think that it is intriguing, as a mathematical counterpart, to consider the time fractional diffusion as arising from the superposition of delayed travelling waves in highly ramified transmission media. The case of a travelling concave parabola with sufficiently small curvature is explicitly computed. The new link that we propose between time fractional diffusion and hyperbolic equation also provides a novelty with respect to the usual paradigm relating time fractional diffusion with parabolic equations in the limit. This paper is written in such a way as to be of interest to both biologists and mathematician alike. In order to accomplish this aim, both complete explanations of the objects considered and detailed lists of references are provided.
Similar content being viewed by others
Notes
As a matter of fact, from the biology perspective, it also makes sense of looking at signal travelling from the right to the left in a medium as the one described in Fig. 1. In this case, the left end of Fig. 1 would act as a “soma” (the cell body of a neuron), which is the site of final integration of the signals and ultimately is responsible to generate action potentials to send to downstream neurons. In our mathematical deduction, this situation can be also taken into account (what counts is just the average delayed obtained by a signal travelling from one end of the transmission medium to the other).
Other models with different structures may also be taken into account to address anomalous diffusion in related contexts. For instance, it is interesting to investigate whether some sort of hyperbolic superposition with delay can also be applied to cases that do not need the presence of multiple branches. In particular, in Santamaria et al. (2011) the pyramidal cells in the hippocampus are studied, showing that the presence of dendritic spines causes anomalous diffusion: indeed, these small protrusions force diffusing molecules to undergo a continuous random walk with random waiting times that result in anomalous diffusion.
For the sake of simplicity, here we take into account equations in the simplest possible form: in particular, we are not explicitly considering forcing terms in the equation (which can be anyway added in a more general analysis). Also, in order to develop formal expansions, we assume \(f_o\) to be smooth, with a smoothness independent of the structural parameters N, L and c. The advantage of the scaling in the variable of \(f_o\) is that its dependence on the spatial variables is weighted by the natural scale of the problem, thus \(f_o\) is a function of “adimensional” coordinates.
References
Abatangelo N, Valdinoci E (2019) Getting acquainted with the fractional Laplacian. To appear in Springer INdAM Ser
Allen M (2018) A nondivergence parabolic problem with a fractional time derivative. Differ Integral Equ 31(3–4):215–230
Allen M, Caffarelli L, Vasseur A (2016) A parabolic problem with a fractional time derivative. Arch Ration Mech Anal 221(2):603–630
Anastasio TJ (1998) Nonuniformity in the linear network model of the oculomotor integrator produces approximately fractional-order dynamics and more realistic neuron behavior. Biol Cybern 79:377–391
Appali R, van Rienen U, Heimburg T (2012) A comparison of the Hodgkin-Huxley model the soliton theory for the action potential in nerves. Adv Planar Lipid Bilayers Liposomes 16:275–298
Bagley R (2007) On the equivalence of the Riemann–Liouville and the Caputo fractional order derivatives in modeling of linear viscoelastic materials. Fract Calc Appl Anal 10(2):123–126
Balanis CA (2012) Advanced engineering electromagnetics. Wiley, Hoboken
ben-Avraham D, Havlin S (2000) Diffusion and reactions in fractals and disordered systems. Cambridge University Press, Cambridge
Blanco A, Moyano R, Vivo J, Flores-Acuña R, Molina A, Blanco C, Monterde JG (2006) Purkinje cell apoptosis in arabian horses with cerebellar abiotrophy. J Vet Med Physiol Pathol Clin Med 53(6):286–287
Bucur C (2017) Local density of Caputo-stationary functions in the space of smooth functions. ESAIM Control Optim Calc Var 23(4):1361–1380
Bucur C, Valdinoci E (2016) Nonlocal diffusion and applications, vol 20. Lecture Notes of the Unione Matematica Italiana. Springer, Bologna
Caputo M (1967) Linear model of dissipation whose \(Q\) is almost frequency independent-II. Geophys J R Astron Soc 13(5):529–539
Coombes S (2006) Neural fields. Scholarpedia 1(6):1373
Dáger R, Zuazua E (2006) Wave propagation, observation and control in 1-d flexible multi-structures, vol 50. Mathématiques & applications. Springer-Verlag, Berlin
Diethelm K (2004) The analysis of fractional differential equations. An application-oriented exposition using differential operators of Caputo type. Lecture Notes in Mathematics. Springer, Berlin
Dipierro S, Savin O, Valdinoci E (2017) All functions are locally \(s\)-harmonic up to a small error. J Eur Math Soc (JEMS) 19(4):957–966
Dipierro S, Savin O, Valdinoci E (2016) Local approximation of arbitrary functions by solutions of nonlocal equations. arXiv:1609.04438
Du M, Wang Z, Hu H (2013) Measuring memory with the order of fractional derivative. Sci Rep 3:3431
El Hady A, Machta BB (2015) Mechanical surface waves accompany action potential propagation. Nat Commun 6:6697 EP
Ermentrout GB, Kleinfeld D (2001) Traveling electrical waves in cortex: insights from phase dynamics and speculation on a computational role. Neuron 29:33–44
Ermentrout GB, McLeod JB (1993) Existence and uniqueness of travelling waves for a neural network. Proc R Soc Edinb 123A:461–478
Evans LC (1998) Partial differential equations, vol 19. Graduate studies in mathematics. American Mathematical Society, Providence
Fiala JC, Harris KM (1999) Dendrite structure. In: Stuart G, Nelson S, Häusser M (eds) Dendrites. Oxford Scholarship Online. Oxford University Press, Oxford
Gonzalez-Perez A, Mosgaard LD, Budvytyte R, Villagran-Vargas E, Jackson AD, Heimburg T (2016) Solitary electromechanical pulses in lobster neurons. Biophys Chem 216:51–59
Heimburg T, Jackson AD (2005) On soliton propagation in biomembranes and nerves. Proc Natl Acad Sci 102(28):9790–9795
Hodgkin AL, Huxley AF (1952) A quantitative description of membrane current and its application to conduction and excitation in nerve. J Physiol 117(4):500–544
Ionescu C, Lopes A, Copot D, Machado JAT, Bates JHT (2017) The role of fractional calculus in modelling biological phenomena: a review. Commun Nonlinear Sci Numer Simul 51:141–159
Ivancevic VG, Ivancevic TT (2010) Quantum neural computation. Springer, Dordrecht
Karakash JJ (1950) Transmission lines and filter networks. Macmillan, New York
Kim I, Kim K-H, Lim S (2017) An \(L_q (L_p )\)-theory for the time fractional evolution equations with variable coefficients. Adv Math 306:123–176
Larkum ME, Watanabe S, Nakamura T, Lasser-Ross N, Ross WN (2003) Synaptically activated Ca2+ waves in layer 2/3 and layer 5 rat neocortical pyramidal neurons. J Physiol 549:471–488
Lautrup B, Appali R, Jackson AD, Heimburg T (2011) The stability of solitons in biomembranes and nerves. Eur Phys J 34(57):1–9
Magin RL (2010) Fractional calculus models of complex dynamics in biological tissues. Comput Math Appl 59:1586–1593
Marinov T, Santamaria F (2013) Modeling the effects of anomalous diffusion on synaptic plasticity. BMC Neurosci 14(Suppl. 1):P343
Marinov T, Santamaria F (2014) Computational modeling of diffusion in the cerebellum. Prog Mol Biol Transl Sci 123:169–89
Mavroudis IA, Fotiou DF, Adipepe LF, Manani MG, Njau SD, Psaroulis D, Costa VG, Baloyannis SJ (2010) Morphological changes of the human Purkinje cells and deposition of neuritic plaques and neurofibrillary tangles on the cerebellar cortex of Alzheimer’s disease. Am J Alzheimer’s Dis Other Demen 25(7):585–591
Metzler R, Klafter J (2000) The random walks guide to anomalous diffusion: a fractional dynamics approach. Phys Rep 339(1):1–77
Miranker WL (2006) A neural network wave formalism. Adv Appl Math 37:19–30
Nakamura T, Lasser-Ross N, Nakamura K, Ross WN (2002) Spatial segregation and interaction of calcium signalling mechanisms in rat hippocampal CA1 pyramidal neurons. J Physiol 543:465–480
Neymotin SA, McDougal RA, Sherif MA, Fall CP, Hines ML, Lytton WW (2015) Neuronal Calcium wave propagation varies with changes in endoplasmic reticulum parameters: a computer model. Neural Comput 27(4):898–924
Nimchinsky EA, Sabatini BL, Svoboda K (2002) Structure and function of dendritic spines. Annu Rev Physiol 64:313–353
Pinto DJ, Ermentrout GB (2001) Spatially structured activity in synaptically coupled neuronal networks: I. Travelling fronts and pulses. SIAM J Appl Math 62:206–225
Rigatos GG (2015) Advanced models of neural networks. Nonlinear dynamics and stochasticity in biological neurons. Springer, Berlin
Ross WN (2002) Understanding calcium waves and sparks in central neurons. Nat Rev Neurosci 13:157–168
Saftenku EÈ (2005) Modeling of slow glutamate diffusion and AMPA receptor activation in the cerebellar glomerulus. J Theor Biol 234:363–382
Santamaria F, Wils S, De Schutter E, Augustine GJ (2006) Anomalous diffusion in Purkinje cell dendrites caused by spines. Neuron 52:635–648
Santamaria F, Wils S, De Schutter E, Augustine GJ (2011) The diffusional properties of dendrites depend on the density of dendritic spines. Eur J Neurosci 34(4):561–568
Saxton MJ (1996) Anomalous diffusion due to binding: a Monte Carlo study. Biophys J 70:1250–1262
Thorson J, Biederman-Thorson M (1974) Distributed relaxation processes in sensory adaptation: spatial nonuniformity in receptors can explain both the curious dynamics and logarithmic statics of adaptation. Science 183(4121):161–172
Trommershäuser J, Marienhagen J, Zippelius A (1999) Stochastic model of central synapses: slow diffusion of transmitter interacting with spatially distributed receptors and transporters. J Theor Biol 198:101–120
von Schweidler ER (1907) Studien über die Anomalien im Verhalten der Dielectrika. Ann Phys 24:711–770
Wikipedia: Drawing of Purkinje cells (A) and granule cells (B) from pigeon cerebellum by Santiago Ramón y Cajal, 1899; Instituto Cajal, Madrid, Spain. File:PurkinjeCell.jpg https://en.wikipedia.org/wiki/Purkinje_cell#/media/File:PurkinjeCell.jpg
Zacher R (2005) Maximal regularity of type \(L_p\) for abstract parabolic Volterra equations. J Evol Equ 5(1):79–103
Zacher R (2013) A De Giorgi–Nash type theorem for time fractional diffusion equations. Math Ann 356(1):99–146
Acknowledgements
It is a pleasure to thank Elena Saftenku and Fidel Santamaria for very interesting discussions on neural transmissions. We also thank the Referees for their very valuable comments. This work has been supported by the Australian Research Council Discovery Project “N.E.W. Nonlocal Equations at Work”.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Dipierro, S., Valdinoci, E. A Simple Mathematical Model Inspired by the Purkinje Cells: From Delayed Travelling Waves to Fractional Diffusion. Bull Math Biol 80, 1849–1870 (2018). https://doi.org/10.1007/s11538-018-0437-z
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s11538-018-0437-z
Keywords
- Mathematical models
- Deduction from basic principles
- Time fractional equations
- Wave equations
- Purkinje cells
- Dendrites Neuronal arbours