Skip to main content
Log in

Molecular classification of Pakistani collared dove through DNA barcoding

  • Published:
Molecular Biology Reports Aims and scope Submit manuscript

Abstract

Pakistan is bestowed by a diversified array of wild bird species including collared doves of which the taxonomy has been least studied and reported. DNA barcoding is a geno-taxonomic tool that has been used for characterization of bird species using mitochondrial cytochrome c oxidase I gene (COI). This study aimed to identify taxonomic order of Pakistani collared dove using DNA barcoding. Purposely herein, we present a phylogenetic analysis of Pakistani collared dove based on 650 base pairs of COI gene sequences. Analysis of phylogenetic tree revealed that Pakistani collared dove shared a common clade with Eurasian collared dove (Streptopelia decaocto) and African collared dove (Streptopelia roseogrisea) which indicated a super-species group in Streptopelia genus. This is the first report of molecular classification of Pakistani collared dove using DNA barcoding.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1

Similar content being viewed by others

References

  1. Knowlton N (1993) Sibling species in the sea. A Rev Ecol Syst 24:189–216

    Article  Google Scholar 

  2. Galtier N, Nabholz B, Glemin S, Hurst GD (2009) Mitochondrial DNA as a marker of molecular diversity: a reappraisal. Mol Ecol 18(22):4541–4550

    Article  PubMed  CAS  Google Scholar 

  3. Gissi C, Iannelli F, Pesole G (2008) Evolution of the mitochondrial genome of Metazoa as exemplified by comparison of congeneric species. Heredity 101(4):301–320

    Article  PubMed  CAS  Google Scholar 

  4. Pacheco MA, Battistuzzi FU, Lentino M, Aguilar RF, Kumar S, Escalante AA (2011) Evolution of modern birds revealed by mitogenomics: timing the radiation and origin of major orders. Mol Biol Evol 28(6):1927–1942

    Article  PubMed  CAS  Google Scholar 

  5. Hebert PD, Stoeckle MY, Zemlak TS, Francis CM (2004) Identification of Birds through DNA Barcodes. PLoS Biol 2(10):e312

    Article  PubMed  Google Scholar 

  6. Kerr KC, Stoeckle MY, Dove CJ, Weigt LA, Francis CM, Hebert PD (2007) Comprehensive DNA barcode coverage of North American birds. Mol Ecol Notes 7(4):535–543

    Article  PubMed  CAS  Google Scholar 

  7. Remigio EA, Hebert PD (2003) Testing the utility of partial COI sequences for phylogenetic estimates of gastropod relationships. Mol Phylogenet Evol 29(3):641–647

    Article  PubMed  CAS  Google Scholar 

  8. Greenstone MH, Rowley DL, Heimbach U, Lundgren JG, Pfannenstiel RS, Rehner SA (2005) Barcoding generalist predators by polymerase chain reaction: carabids and spiders. Mol Ecol 14(10):3247–3266

    Article  PubMed  CAS  Google Scholar 

  9. Ward RD, Zemlak TS, Innes BH, Last PR, Hebert PD (2005) DNA barcoding Australia’s fish species. Philos Trans R Soc Lond 360(1462):1847–1857

    Article  CAS  Google Scholar 

  10. Smith MA, Fisher BL, Hebert PD (2005) DNA barcoding for effective biodiversity assessment of a hyperdiverse arthropod group: the ants of Madagascar. Philos Trans R Soc Lond 360(1462):1825–1834

    Article  CAS  Google Scholar 

  11. Sambrook J, Russell DW (2001) Molecular cloning: a laboratory manual III. Cold Spring Laboratory Press, Cold Spring Harbour

    Google Scholar 

  12. Desper R, Gascuel O (2004) Theoretical foundation of the balanced minimum evolution method of phylogenetic inference and its relationship to weighted least-squares tree fitting. Mol Biol Evol 21(3):587–598

    Article  PubMed  CAS  Google Scholar 

  13. David G, Barnes E, Cox J (2001) Pigeons and doves: a guide to the pigeons and doves of the world. Pica Press, East Sussex

    Google Scholar 

  14. Nabholz B, Glemin S, Galtier N (2009) The erratic mitochondrial clock: variations of mutation rate, not population size, affect mtDNA diversity across birds and mammals. BMC Evol Biol 9:54

    Article  PubMed  Google Scholar 

  15. Baker AJ, Tavares ES, Elbourne RF (2009) Countering criticisms of single mitochondrial DNA gene barcoding in birds. Mol ecol resour 9(1):257–268

    Article  PubMed  CAS  Google Scholar 

  16. Gibb GC, Penny D (2010) Two aspects along the continuum of pigeon evolution: a South-Pacific radiation and the relationship of pigeons within Neoaves. Mol Phylogenet Evol 56(2):698–706

    Article  PubMed  Google Scholar 

  17. Kan XZ, Yang JK, Li XF, Chen L, Lei ZP, Wang M, Qian CJ, Gao H, Yang ZY (2010) Phylogeny of major lineages of galliform birds (Aves: Galliformes) based on complete mitochondrial genomes. Genet Mol Res 9(3):1625–1633

    Article  PubMed  CAS  Google Scholar 

  18. Stringham SA, Mulroy EE, Xing J, Record D, Guernsey MW, Aldenhoven JT, Osborne EJ, Shapiro MD (2012) Divergence, convergence, and the ancestry of feral populations in the domestic rock pigeon. Curr Biol 22(4):302–308

    Article  PubMed  CAS  Google Scholar 

  19. Mila B, Tavares ES, Munoz Saldana A, Karubian J, Smith TB, Baker AJ (2012) A trans-Amazonian screening of mtDNA reveals deep intraspecific divergence in forest birds and suggests a vast underestimation of species diversity. PLoS One 7(7):e40541

    Article  PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Ali Raza Awan.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Awan, A.R., Umar, E., Zia ul Haq, M. et al. Molecular classification of Pakistani collared dove through DNA barcoding. Mol Biol Rep 40, 6329–6331 (2013). https://doi.org/10.1007/s11033-013-2747-4

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s11033-013-2747-4

Keywords:

Navigation