Abstract
The species of the genus Emericella have been classified and identified on the basis of morphological features. However, the phylogenetic relationships in this genus have not been investigated. To clarify the relationships according to molecular phylogenetics, morphological characteristics, and growth temperature regimens in Emericella, multilocus sequencing analysis based on recent Aspergillus taxonomy was carried out. Various characteristic species formed individual clades, and maximum growth temperature reflected the phylogenetics. Emericella species exhibit various ascospore characteristics, although some species do not have distinct ascospore ornamentation. Species that have smooth-walled ascospores with two equatorial crests are polyphyletic. Here, Emericella pachycristata is described and illustrated as a new species. Its ascospores are similar to those of E. nidulans. These species produce smooth-walled ascospores, but the equatorial crests of E. pachycristata are thicker than those of E. nidulans. On the phylogenetic trees, E. pachycristata is closely related to E. rugulosa, which produces ascospores with ribbed convex surfaces. Thus, E. pachycristata is considered to be a new species both morphologically and phylogenetically.
Similar content being viewed by others
References
Balajee SA, Gribskov JL, Hanley E, Nickle D, Marr KA (2005) Aspergillus lentulus sp. nov., a new sibling species of A. fumigatus. Eukaryot Cell 4:625–632
Balajee SA, Houbraken J, Verweij PE, Hong SB, Yaghuchi T, Varg J, Samson RA (2007) Aspergillus species identification in the clinical setting. Stud Mycol 59:39–46
Brown DW, Yu JH, Kelkar HS, Fernandes M, Nesbitt TC, Keller NP, Adams TH, Leonard TJ (1996) Twenty-five coregulated transcripts define a sterigmatocystin gene cluster in Aspergillus nidulans. Proc Natl Acad Sci USA 93:1418–1422
Carbone I, Kohn LM (1999) A method for designing primer sets for speciation studies in filamentous ascomycetes. Mycologia 91:553–556
Cary JW, Klich MA, Beltz SB (2005) Characterization of aflatoxin-producing fungi outside of Aspergillus section Flavi. Mycologia 97:425–432
Christensen M (1978) Two new Aspergillus nidulans group members from Wyoming soils. Mycologia 70:332–342
De Hoog GS, Guarro J, Gené J, Figueras MJ (2000) Atlas of clinical fungi, 2nd edn. Centraalbureau voor Schimmelcultures, Utrecht, pp 486–488
Dotis J, Panagopoulou P, Filioti J, Winn R, Toptsis C, Panteliadis C, Roilides E (2003) Femoral osteomyelitis due to Aspergillus nidulans in a patient with chronic granulomatous disease. Infection 31:121–124
Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783–791
Fitch WM (1977) On the problem of discovering the most parsimonious tree. Am Nat 111:223–257
Frisvad JC, Samson RA (2004) Emericella venezuelensis, a new species with stellate ascospores producing sterigmatocystin and aflatoxin B1. Syst Appl Microbiol 27:672–680
Frisvad JC, Samson RA, Smedsgaard J (2004) Emericella astellata, a new producer of aflatoxin B1, B2 and sterigmatocystin. Lett Appl Microbiol 38:440–445
Glass NL, Donaldson GC (1995) Development of primer sets designed for use with the PCR to amplify conserved genes from filamentous ascomycetes. Appl Environ Microbiol 61:1323–1330
Gugnani HC, Vijayan VK, Tyagi P, Sharma S, Stchigel AM, Guarro J (2004) Onychomycosis due to Emericella quadrilineata. J Clin Microbiol 42:914–916
Hong SB, Go SJ, Shin HD, Frisvad JC, Samson RA (2005) Polyphasic taxonomy of Aspergillus fumigatus and related species. Mycologia 97:1316–1329
Hong SB, Shin HD, Hong J, Frisvad JC, Nielsen PV, Varga J, Samson RA (2008) New taxa of Neosartorya and Aspergillus in Aspergillus section Fumigati. Antonie Van Leeuwenhoek 93:87–98
Horie Y (1979) New or interesting Emericella from herbal drugs. Trans Mycol Soc Jpn 20:481–491
Horie Y (1980) Ascospore ornamentation and its application to the taxonomic re-revaluation in Emericella. Trans Mycol Soc Jpn 21:483–493
Horie Y (1996) New and interesting species of Emericella from Chinese soil. Mycoscience 37:323–329
Horie Y (1998) Emericella appendiculata, a new species from Chinese soil. Mycoscience 39:161–165
Horie Y (2000) Emericella qinqixianii, a new species from desert soil in China. Mycoscience 41:183–187
Horre R, Schumacher G, Marklein G, Kromer B, Wardelmann E, Gilges S, De Hoog GS, Wahl G, Schaal KP (2002) Case report. Maxillary sinus infection due to Emericella nidulans. Mycoses 45:402–405
Kato N, Brooks W, Calvo AM (2003) The expression of sterigmatocystin and penicillin genes in Aspergillus nidulans is controlled by veA, a gene required for sexual development. Eukaryot Cell 2:1178–1186
Keller NP (2006) Aspergillus nidulans: a model for elucidation of Aspergillus fumigatus secondary metabolism. In: Heitman J, Filler SG, Edwards JE Jr, Mitchell AP (eds) Molecular principles of fungal pathogenesis. ASM Press, Washington, DC, pp 235–243
Keller NP, Kantz NJ, Adams TH (1994) Aspergillus nidulans verA is required for production of the mycotoxin sterigmatocystin. Appl Environ Microbiol 60:1444–1450
Kimura M (1980) A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16:111–120
Klich M, Mendoza C, Mullaney E, Keller N, Bennett JW (2001) A new sterigmatocystin-producing Emericella variant from agricultural desert soils. Syst Appl Microbiol 24:131–138
Kornerup A, Wanscher JH (1978) Methuen handbook of colour, 3rd edn. Methuen, London, p 252
Malmstrom J (1999) Unguisins A and B: new cyclic peptides from the marine-derived fungus Emericella unguis. J Nat Prod 62:787–789
Malmstrom J, Ryager A, Anthoni U, Nielsen PH (2002) Unguisin C, a GABA-containing cyclic peptide from the fungus Emericella unguis. Phytochemistry 60:869–872
Oh D-C, Kauffman CA, Jensen PR, Fenical W (2007) Induced production of emericellamides A and B from the marine-derived fungus Emericella sp. in competing co-culture. J Nat Prod 70:515–520
Peterson SW (2008) Phylogenetic analysis of Aspergillus species using DNA sequences from four loci. Mycologia 100:205–226
Raper KB, Fennell DI (1965) The genus Aspergillus. Williams & Wilkins, Baltimore, pp 491–542
Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406–425
Samson RA, Varga J, Witiak SM, Geiser DM (2007) The species concept in Aspergillus: recommendations of an international panel. Stud Mycol 59:71–73
Stchigel AM, Guarro J (1997) A new species of Emericella from Indian soil. Mycologia 89:937–941
Stchigel AM, Cano J, Guarro J (1999) A new species of Emericella and a rare morphological variant of E. quadrilineata. Mycol Res 103:1057–1064
Swofford DL (2002) PAUP*: phylogenetic analysis using parsimony (*and other methods), version 4b10. Sinauer Associates, Sunderland
Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876–4882
Udagawa S, Muroi T (1979) Some interesting species of Ascomycetes from imported spices. Trans Mycol Soc Jpn 20:13–22
Yaguchi T, Horie Y, Tanaka R, Matsuzawa T, Ito J (2007) Molecular phylogenetics of multiple genes on Aspergillus section Fumigati isolated from clinical specimens in Japan. Jpn J Med Mycol 48:37–46
Zalar P, Frisvad JC, Gunde-Cimerman N, Varga J, Samson RA (2008) Four new species of Emericella from the Mediterranean region of Europe. Mycologia 100:779–795
Acknowledgments
This work was supported in part by the National Bioresource Project “Pathogenic microbes in Japan” (http://www.nbrp.jp/) and a Grant-in-Aid for Scientific Research (B-18405005) from the Japan Society for the Promotion of Science.
Author information
Authors and Affiliations
Corresponding author
About this article
Cite this article
Matsuzawa, T., Tanaka, R., Horie, Y. et al. The correlation among molecular phylogenetics, morphological data, and growth temperature of the genus Emericella, and a new species. Mycoscience 53, 433–445 (2012). https://doi.org/10.1007/s10267-012-0188-x
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s10267-012-0188-x