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Taxonomic revision of Lophiostoma and Lophiotrema based on reevaluation of morphological characters and molecular analyses

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Mycoscience

Abstract

Lophiostoma and Lophiotrema share several morphological and ecological features. They have been regarded as closely related genera within the family Lophiostomataceae, but their morphological circumscriptions have been uncertain. To clarify the generic definitions of Lophiostoma and Lophiotrema, we conducted phylogenetic analyses of 29 isolates of these genera based on the SSU and LSU nrDNA sequences, and also reevaluated several key characters previously used for their generic characterization. Our results clearly confirmed that Lophiostoma and Lophiotrema are distinct genera belonging to different families; the ascus shape, including length of the ascus stipe, is a reliable taxonomic indicator to allow discrimination between the genera. In Lophiostoma species, asci are clavate with relatively long stipes [mostly (10–) 15–30 μm in length], whereas in Lophiotrema the asci are cylindrical with short stipes (up to 15 μm long). A new family, Lophiotremataceae, is proposed to accommodate species in the Lophiotrema clade that was distantly placed from the Lophiostomataceae within the Pleosporales. Lophiostoma quadrisporum, collected from twigs of Liriodendron tulipifera, is described as a new species with distinctive 4-spored asci. Lophiotrema vitigenum, which has clavate asci with long stipes, is transferred to Lophiostoma.

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References

  • Abdel-Wahab MA, Jones EBG (2000) Three new ascomycetes from driftwood in Australian sand dunes. Mycoscience 41:379–388

    Article  Google Scholar 

  • Barr ME (1992) Notes on the Lophiostomataceae (Pleosporales). Mycotaxon 45:191–221

    Google Scholar 

  • Berlese AN (1894) Icones fungorum omnium hucusque cognitorum, vol 1. Patavii, pp 1–22

  • Boehm EWA, Schoch CL, Spatafora JW (2009) On the evolution of the Hysteriaceae and Mytilinidiaceae (Pleosporomycetidae, Dothideomycetes, Ascomycota) using four nuclear genes. Mycol Res 113:461–479

    Article  PubMed  CAS  Google Scholar 

  • Cai L, Zhang K, McKenzie EHC, Hyde KD (2003) Freshwater fungi from bamboo and wood submerged in the Liput River in the Philippines. Fungal Divers 13:1–12

    Google Scholar 

  • Câmara MPS, Palm ME, van Berkum P, O’Neill NR (2002) Molecular phylogeny of Leptosphaeria and Phaeosphaeria. Mycologia 94:630–640

    Article  PubMed  Google Scholar 

  • Chesters CGC, Bell A (1970a) Studies in the Lophiostomataceae. Mycol Pap 120:1–129

    Google Scholar 

  • Chesters CGC, Bell A (1970b) Pseudothecium development in the Lophiostomataceae. Trans Br Mycol Soc 54:27–34

    Article  Google Scholar 

  • Clements FE, Shear CL (1931) The genera of fungi. Hafner, New York

    Google Scholar 

  • Eriksson OE (1967) On graminicolous pyrenomycetes from Fennoscandia. 2. Phragmosporous and scolecosporous species. Ark Bot 6:381–440

    Google Scholar 

  • Eriksson OE (2009) The non-lichenized ascomycetes of Sweden. Umeå University, Umeå

    Google Scholar 

  • Eriksson O, Yue J-Z (1986) Bertiella (Sacc.) Sacc. & Sydow a synonym of Massarina Sacc. Mycotaxon 27:247–253

    Google Scholar 

  • Hawksworth DL (1979) Ascospore sculpturing and generic concepts in the Testudinaceae (syn. Zopfiaceae). Can J Bot 57:91–99

    Article  Google Scholar 

  • Hirayama K, Tanaka K, Raja HA, Miller AN, Shearer CA (2010) A molecular phylogenetic assessment of Massarina ingoldiana sensu lato. Mycologia 102:729–746

    Article  PubMed  CAS  Google Scholar 

  • Holm L, Holm K (1988) Studies in the Lophiostomataceae with emphasis on the Swedish species. Symb Bot Ups 28(2):1–50

    Google Scholar 

  • Huhndorf SM (1991) A method of sectioning ascomycete herbarium specimens for light microscopy. Mycologia 83:520–524

    Article  Google Scholar 

  • Huhndorf SM (1992) Systematics of Leptosphaeria species found on the Rosaceae. Ill Nat Hist Surv Bull 34:479–535

    Google Scholar 

  • Hyde KD (1994) Aquatic fungi on rachides of Livistona in the Western Province of Papua New Guinea. Mycol Res 98:719–725

    Article  Google Scholar 

  • Hyde KD (1995) Tropical Australian freshwater fungi. VII. New genera and species of ascomycetes. Nova Hedwigia 61:119–140

    Google Scholar 

  • Hyde KD, Aptroot A (1998) Tropical freshwater species of the genera Massarina and Lophiostoma (ascomycetes). Nova Hedwigia 66:489–502

    Google Scholar 

  • Hyde KD, Vrijmoed LLP, Chinnaraj S, Jones EBG (1992) Massarina armatispora sp. nov., a new intertidal ascomycete from mangroves. Bot Mar 35:325–328

    Article  Google Scholar 

  • Hyde KD, Aptroot A, Fröhlich J, Taylor JE (2000) Fungi from palms. XLIII. Lophiostoma and Astrosphaeriella species with slit-like ostioles. Nova Hedwigia 70:143–160

    Google Scholar 

  • Hyde KD, Wong WSW, Aptroot A (2002) Marine and estuarine species of Lophiostoma and Massarina. In: Hyde KD (ed) Fungi in marine environments. Fungal Diversity Press, Hong Kong, pp 93–109

    Google Scholar 

  • Jones EBG (2006) Form and function of fungal spore appendages. Mycoscience 47:167–183

    Article  CAS  Google Scholar 

  • Kirk PM, Cannon PF, Minter DW, Stalpers JA (2008) Ainsworth and Bisby’s dictionary of the fungi, 10th edn. CAB International, Wallingford

    Google Scholar 

  • Kohlmeyer J, Vittal BPR (1986) Lophiostoma mangrovis, a new marine ascomycete from the tropics. Mycologia 78:485–489

    Article  Google Scholar 

  • Lehmann F (1886) Systematische Bearbeitung der Pyrenomycetengattung Lophiostoma (Fr.) Ces. & Dntrs., mit Berücksichtigung der verwandten Gattungen Glyphium, (N.i.c.), Lophium, Fr., und Mytilinidion, Duby. Nova Acta 50:47–152

    Google Scholar 

  • Leuchtmann A (1985) Kulturversuche mit einigen Arten der Gattung Lophiostoma Ces. & De Not. Sydowia 38:158–170

    Google Scholar 

  • Liew ECY, Aptroot A, Hyde KD (2002) An evaluation of the monophyly of Massarina based on ribosomal DNA sequences. Mycologia 94:803–813

    Article  PubMed  CAS  Google Scholar 

  • Lumbsch HT, Huhndorf SM (2007) Outline of Ascomycota—2007. Myconet 13:1–58

    Google Scholar 

  • Lumbsch HT, Huhndorf SM (2010) Outline of Ascomycota—2009. Part Two. Notes on ascomycete systematics. Nos. 4751–5113. Myconet 14:1–64

    Google Scholar 

  • Mathiassen G (1993) Corticolous and lignicolous Pyrenomycetes s. lat. (Ascomycetes) on Salix along a mid-Scandinavian transect. Sommerfeltia 20:1–180

    Google Scholar 

  • Miller AN, Huhndorf SM (2005) Multi-gene phylogenies indicate ascomal wall morphology is a better predictor of phylogenetic relationships than ascospore morphology in the Sordariales (Ascomycota, Fungi). Mol Phylogenet Evol 35:60–75

    Article  PubMed  CAS  Google Scholar 

  • Mugambi GK, Huhndorf SM (2009a) Molecular phylogenetics of Pleosporales: Melanommataceae and Lophiostomataceae re-circumscribed (Pleosporomycetidae, Dothideomycetes, Ascomycota). Stud Mycol 64:103–121

    Article  PubMed  CAS  Google Scholar 

  • Mugambi GK, Huhndorf SM (2009b) Parallel evolution of hysterothecial ascomata in ascolocularous fungi (Ascomycota, Fungi). Syst Biodivers 7:453–464

    Article  Google Scholar 

  • Munk A (1957) DanishPyrenomycetes. Dansk Bot Ark 17:1–491

    Google Scholar 

  • Nylander JAA (2004) MrModeltest v2. Program distributed by the author. Evolutionary Biology Centre, Uppsala University, Uppsala

  • Rehner SA, Samuels GJ (1994) Taxonomy and phylogeny of Gliocladium analysed from nuclear large subunit ribosomal DNA sequences. Mycol Res 98:625–634

    Article  CAS  Google Scholar 

  • Ronquist F, Huelsenbeck JP (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19:1572–1574

    Article  PubMed  CAS  Google Scholar 

  • Saccardo PA (1878) Fungi italici autographice delineati a Prof. P. A. Saccardo. Patavii 1878. Fascicoli V–VIII sistentes tab. 161–320. Michelia 1:326–350

    Google Scholar 

  • Saccardo PA (1883) Sylloge fungorum omnium hucusque cognitorum, vol 2. Patavii, pp 672–720

  • Schoch CL, Shoemaker RA, Seifert KA, Hambleton S, Spatafora JW, Crous PW (2006) A multigene phylogeny of the Dothideomycetes using four nuclear loci. Mycologia 98:1041–1052

    Article  PubMed  CAS  Google Scholar 

  • Schoch CL, Crous PW, Groenewald JZ, Boehm EWA, Burgess TI, De Gruyter J, De Hoog GS, Dixon LJ, Grube M, Gueidan C, Harada Y, Hatakeyama S, Hirayama K, Hosoya T, Huhndorf SM, Hyde KD, Jones EBG, Kohlmeyer J, Kruys Å, Li YM, Lücking R, Lumbsch HT, Marvanová L, Mbatchou JS, McVay AH, Miller AN, Mugambi GK, Muggia L, Nelsen MP, Nelson P, Owensby CA, Phillips AJL, Phongpaichit S, Pointing SB, Pujade-Renaud V, Raja HA, Rivas Plata E, Robbertse B, Ruibal C, Sakayaroj J, Sano T, Selbmann L, Shearer CA, Shirouzu T, Slippers B, Suetrong S, Tanaka K, Volkmann-Kohlmeyer B, Wingfield MJ, Wood AR, Woudenberg JHC, Yonezawa H, Zhang Y, Spatafora JW (2009) A class-wide phylogenetic assessment of Dothideomycetes. Stud Mycol 64:1–15

    Article  PubMed  CAS  Google Scholar 

  • Shearer CA (1993) The freshwater ascomycetes. Nova Hedwigia 56:1–33

    Google Scholar 

  • Shearer CA, Hyde KD (1997) Massarina ingoldiana, a new ascomycete from freshwater habitats. Mycologia 89:114–119

    Article  Google Scholar 

  • Shearer CA, Raja HA, Miller AN, Nelson P, Tanaka K, Hirayama K, Marvanová L, Hyde KD, Zhang Y (2009) The molecular phylogeny of freshwater Dothideomycetes. Stud Mycol 64:145–153

    Article  PubMed  CAS  Google Scholar 

  • Suetrong S, Schoch CL, Spatafora JW, Kohlmeyer J, Volkmann-Kohlmeyer B, Sakayaroj J, Phongpaichit S, Tanaka K, Hirayama K, Jones EBG (2009) Molecular systematics of the marine Dothideomycetes. Stud Mycol 64:155–173

    Article  PubMed  CAS  Google Scholar 

  • Swofford DL (2003) PAUP*. Phylogenetic analysis using parsimony (*and other methods). Version 4. Sinauer Associates, Sunderland

    Google Scholar 

  • Tamura K, Dudley J, Nei M, Kumer S (2007) MEGA 4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24:1596–1599

    Article  PubMed  CAS  Google Scholar 

  • Tanaka K, Harada Y (2003a) Pleosporales in Japan (1): the genus Lophiostoma. Mycoscience 44:85–96

    Article  Google Scholar 

  • Tanaka K, Harada Y (2003b) Pleosporales in Japan (2): Lophiotrema. Mycoscience 44:115–121

    Article  Google Scholar 

  • Tanaka K, Harada Y (2003c) Pleosporales in Japan (3). The genus Massarina. Mycoscience 44:173–185

    Google Scholar 

  • Tanaka K, Hosoya T (2008) Lophiostoma sagittiforme sp. nov., a new ascomycete (Pleosporales, Dothideomycetes) from Island Yakushima in Japan. Sydowia 60:131–145

    Google Scholar 

  • Tanaka K, Hatakeyama S, Harada Y (2005) Three new freshwater ascomycetes from rivers in Akkeshi, Hokkaido, northern Japan. Mycoscience 46:287–293

    Article  Google Scholar 

  • Tanaka K, Hirayama K, Yonezawa H, Hatakeyama S, Harada Y, Sano T, Shirouzu T, Hosoya T (2009) Molecular taxonomy of bambusicolous fungi: Tetraplosphaeriaceae, a new pleosporalean family with Tetraploa-like anamorphs. Stud Mycol 64:175–209

    Article  PubMed  CAS  Google Scholar 

  • Tanaka K, Hirayama K, Iqbal SH (2010a) Massariosphaeria websteri sp. nov. and several members of the Pleosporales noteworthy to Pakistan. Mycol Balc 7:77–85

    Google Scholar 

  • Tanaka K, Mel’nik VA, Kamiyama M, Hirayama K, Shirouzu T (2010b) Molecular phylogeny of two coelomycetous fungal genera with stellate conidia, Prosthemium and Asterosporium, on Fagales trees. Botany 88:1057–1071

    Article  CAS  Google Scholar 

  • Tang AMC, Hyde KD, Tsui KM, Corlett RT (2003) A new species of Lophiotrema from wild fruit in Hong Kong. Persoonia 18:265–269

    Google Scholar 

  • Vijaykrishna D, Jeewon R, Hyde KD (2006) Molecular taxonomy, origins and evolution of freshwater ascomycetes. Fungal Divers 23:351–390

    Google Scholar 

  • von Arx JA (1971) Testudinaceae, a new family of ascomycetes. Persoonia 6:365–369

    Google Scholar 

  • White TJ, Bruns T, Lee S, Taylor J (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR protocols: a guide to methods and applications. Academic Press, San Diego, pp 315–322

  • Yuan Z, Zhao Z (1994) Studies on lophiostomataceous fungi from Xinjianf, China. Sydowia 46:162–184

    Google Scholar 

  • Zhang Y, Schoch CL, Fournier J, Crous PW, De Gruyter J, Woudenberg JHC, Hirayama K, Tanaka K, Pointing SB, Spatafora JW, Hyde KD (2009a) Multi-locus phylogeny of Pleosporales: a taxonomic, ecological and evolutionary re-evaluation. Stud Mycol 64:85–102

    Article  PubMed  CAS  Google Scholar 

  • Zhang Y, Wang HK, Fournier J, Crous PW, Jeewon R, Pointing SB, Hyde KD (2009b) Towards a phylogenetic clarification of Lophiostoma/Massarina and morphologically similar genera in the Pleosporales. Fungal Divers 38:225–251

    Google Scholar 

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Acknowledgments

This work was partially supported by grants from the Japan Society for the Promotion of Science (JSPS, 22770074), the Sasakawa Scientific Research Grant from the Japan Science Society, and the Hirosaki University Grant for Exploratory Research by Young Scientists (2008–2010). We thank Dr. Vadim A. Mel’nik (Komarov Botanical Institute, Russia) for reviewing the draft manuscript and our reviewers for their valuable comments.

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Correspondence to Kazuaki Tanaka.

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Hirayama, K., Tanaka, K. Taxonomic revision of Lophiostoma and Lophiotrema based on reevaluation of morphological characters and molecular analyses. Mycoscience 52, 401–412 (2011). https://doi.org/10.1007/s10267-011-0126-3

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  • DOI: https://doi.org/10.1007/s10267-011-0126-3

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