Abstract
Lophiostoma and Lophiotrema share several morphological and ecological features. They have been regarded as closely related genera within the family Lophiostomataceae, but their morphological circumscriptions have been uncertain. To clarify the generic definitions of Lophiostoma and Lophiotrema, we conducted phylogenetic analyses of 29 isolates of these genera based on the SSU and LSU nrDNA sequences, and also reevaluated several key characters previously used for their generic characterization. Our results clearly confirmed that Lophiostoma and Lophiotrema are distinct genera belonging to different families; the ascus shape, including length of the ascus stipe, is a reliable taxonomic indicator to allow discrimination between the genera. In Lophiostoma species, asci are clavate with relatively long stipes [mostly (10–) 15–30 μm in length], whereas in Lophiotrema the asci are cylindrical with short stipes (up to 15 μm long). A new family, Lophiotremataceae, is proposed to accommodate species in the Lophiotrema clade that was distantly placed from the Lophiostomataceae within the Pleosporales. Lophiostoma quadrisporum, collected from twigs of Liriodendron tulipifera, is described as a new species with distinctive 4-spored asci. Lophiotrema vitigenum, which has clavate asci with long stipes, is transferred to Lophiostoma.
Similar content being viewed by others
References
Abdel-Wahab MA, Jones EBG (2000) Three new ascomycetes from driftwood in Australian sand dunes. Mycoscience 41:379–388
Barr ME (1992) Notes on the Lophiostomataceae (Pleosporales). Mycotaxon 45:191–221
Berlese AN (1894) Icones fungorum omnium hucusque cognitorum, vol 1. Patavii, pp 1–22
Boehm EWA, Schoch CL, Spatafora JW (2009) On the evolution of the Hysteriaceae and Mytilinidiaceae (Pleosporomycetidae, Dothideomycetes, Ascomycota) using four nuclear genes. Mycol Res 113:461–479
Cai L, Zhang K, McKenzie EHC, Hyde KD (2003) Freshwater fungi from bamboo and wood submerged in the Liput River in the Philippines. Fungal Divers 13:1–12
Câmara MPS, Palm ME, van Berkum P, O’Neill NR (2002) Molecular phylogeny of Leptosphaeria and Phaeosphaeria. Mycologia 94:630–640
Chesters CGC, Bell A (1970a) Studies in the Lophiostomataceae. Mycol Pap 120:1–129
Chesters CGC, Bell A (1970b) Pseudothecium development in the Lophiostomataceae. Trans Br Mycol Soc 54:27–34
Clements FE, Shear CL (1931) The genera of fungi. Hafner, New York
Eriksson OE (1967) On graminicolous pyrenomycetes from Fennoscandia. 2. Phragmosporous and scolecosporous species. Ark Bot 6:381–440
Eriksson OE (2009) The non-lichenized ascomycetes of Sweden. Umeå University, Umeå
Eriksson O, Yue J-Z (1986) Bertiella (Sacc.) Sacc. & Sydow a synonym of Massarina Sacc. Mycotaxon 27:247–253
Hawksworth DL (1979) Ascospore sculpturing and generic concepts in the Testudinaceae (syn. Zopfiaceae). Can J Bot 57:91–99
Hirayama K, Tanaka K, Raja HA, Miller AN, Shearer CA (2010) A molecular phylogenetic assessment of Massarina ingoldiana sensu lato. Mycologia 102:729–746
Holm L, Holm K (1988) Studies in the Lophiostomataceae with emphasis on the Swedish species. Symb Bot Ups 28(2):1–50
Huhndorf SM (1991) A method of sectioning ascomycete herbarium specimens for light microscopy. Mycologia 83:520–524
Huhndorf SM (1992) Systematics of Leptosphaeria species found on the Rosaceae. Ill Nat Hist Surv Bull 34:479–535
Hyde KD (1994) Aquatic fungi on rachides of Livistona in the Western Province of Papua New Guinea. Mycol Res 98:719–725
Hyde KD (1995) Tropical Australian freshwater fungi. VII. New genera and species of ascomycetes. Nova Hedwigia 61:119–140
Hyde KD, Aptroot A (1998) Tropical freshwater species of the genera Massarina and Lophiostoma (ascomycetes). Nova Hedwigia 66:489–502
Hyde KD, Vrijmoed LLP, Chinnaraj S, Jones EBG (1992) Massarina armatispora sp. nov., a new intertidal ascomycete from mangroves. Bot Mar 35:325–328
Hyde KD, Aptroot A, Fröhlich J, Taylor JE (2000) Fungi from palms. XLIII. Lophiostoma and Astrosphaeriella species with slit-like ostioles. Nova Hedwigia 70:143–160
Hyde KD, Wong WSW, Aptroot A (2002) Marine and estuarine species of Lophiostoma and Massarina. In: Hyde KD (ed) Fungi in marine environments. Fungal Diversity Press, Hong Kong, pp 93–109
Jones EBG (2006) Form and function of fungal spore appendages. Mycoscience 47:167–183
Kirk PM, Cannon PF, Minter DW, Stalpers JA (2008) Ainsworth and Bisby’s dictionary of the fungi, 10th edn. CAB International, Wallingford
Kohlmeyer J, Vittal BPR (1986) Lophiostoma mangrovis, a new marine ascomycete from the tropics. Mycologia 78:485–489
Lehmann F (1886) Systematische Bearbeitung der Pyrenomycetengattung Lophiostoma (Fr.) Ces. & Dntrs., mit Berücksichtigung der verwandten Gattungen Glyphium, (N.i.c.), Lophium, Fr., und Mytilinidion, Duby. Nova Acta 50:47–152
Leuchtmann A (1985) Kulturversuche mit einigen Arten der Gattung Lophiostoma Ces. & De Not. Sydowia 38:158–170
Liew ECY, Aptroot A, Hyde KD (2002) An evaluation of the monophyly of Massarina based on ribosomal DNA sequences. Mycologia 94:803–813
Lumbsch HT, Huhndorf SM (2007) Outline of Ascomycota—2007. Myconet 13:1–58
Lumbsch HT, Huhndorf SM (2010) Outline of Ascomycota—2009. Part Two. Notes on ascomycete systematics. Nos. 4751–5113. Myconet 14:1–64
Mathiassen G (1993) Corticolous and lignicolous Pyrenomycetes s. lat. (Ascomycetes) on Salix along a mid-Scandinavian transect. Sommerfeltia 20:1–180
Miller AN, Huhndorf SM (2005) Multi-gene phylogenies indicate ascomal wall morphology is a better predictor of phylogenetic relationships than ascospore morphology in the Sordariales (Ascomycota, Fungi). Mol Phylogenet Evol 35:60–75
Mugambi GK, Huhndorf SM (2009a) Molecular phylogenetics of Pleosporales: Melanommataceae and Lophiostomataceae re-circumscribed (Pleosporomycetidae, Dothideomycetes, Ascomycota). Stud Mycol 64:103–121
Mugambi GK, Huhndorf SM (2009b) Parallel evolution of hysterothecial ascomata in ascolocularous fungi (Ascomycota, Fungi). Syst Biodivers 7:453–464
Munk A (1957) DanishPyrenomycetes. Dansk Bot Ark 17:1–491
Nylander JAA (2004) MrModeltest v2. Program distributed by the author. Evolutionary Biology Centre, Uppsala University, Uppsala
Rehner SA, Samuels GJ (1994) Taxonomy and phylogeny of Gliocladium analysed from nuclear large subunit ribosomal DNA sequences. Mycol Res 98:625–634
Ronquist F, Huelsenbeck JP (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19:1572–1574
Saccardo PA (1878) Fungi italici autographice delineati a Prof. P. A. Saccardo. Patavii 1878. Fascicoli V–VIII sistentes tab. 161–320. Michelia 1:326–350
Saccardo PA (1883) Sylloge fungorum omnium hucusque cognitorum, vol 2. Patavii, pp 672–720
Schoch CL, Shoemaker RA, Seifert KA, Hambleton S, Spatafora JW, Crous PW (2006) A multigene phylogeny of the Dothideomycetes using four nuclear loci. Mycologia 98:1041–1052
Schoch CL, Crous PW, Groenewald JZ, Boehm EWA, Burgess TI, De Gruyter J, De Hoog GS, Dixon LJ, Grube M, Gueidan C, Harada Y, Hatakeyama S, Hirayama K, Hosoya T, Huhndorf SM, Hyde KD, Jones EBG, Kohlmeyer J, Kruys Å, Li YM, Lücking R, Lumbsch HT, Marvanová L, Mbatchou JS, McVay AH, Miller AN, Mugambi GK, Muggia L, Nelsen MP, Nelson P, Owensby CA, Phillips AJL, Phongpaichit S, Pointing SB, Pujade-Renaud V, Raja HA, Rivas Plata E, Robbertse B, Ruibal C, Sakayaroj J, Sano T, Selbmann L, Shearer CA, Shirouzu T, Slippers B, Suetrong S, Tanaka K, Volkmann-Kohlmeyer B, Wingfield MJ, Wood AR, Woudenberg JHC, Yonezawa H, Zhang Y, Spatafora JW (2009) A class-wide phylogenetic assessment of Dothideomycetes. Stud Mycol 64:1–15
Shearer CA (1993) The freshwater ascomycetes. Nova Hedwigia 56:1–33
Shearer CA, Hyde KD (1997) Massarina ingoldiana, a new ascomycete from freshwater habitats. Mycologia 89:114–119
Shearer CA, Raja HA, Miller AN, Nelson P, Tanaka K, Hirayama K, Marvanová L, Hyde KD, Zhang Y (2009) The molecular phylogeny of freshwater Dothideomycetes. Stud Mycol 64:145–153
Suetrong S, Schoch CL, Spatafora JW, Kohlmeyer J, Volkmann-Kohlmeyer B, Sakayaroj J, Phongpaichit S, Tanaka K, Hirayama K, Jones EBG (2009) Molecular systematics of the marine Dothideomycetes. Stud Mycol 64:155–173
Swofford DL (2003) PAUP*. Phylogenetic analysis using parsimony (*and other methods). Version 4. Sinauer Associates, Sunderland
Tamura K, Dudley J, Nei M, Kumer S (2007) MEGA 4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24:1596–1599
Tanaka K, Harada Y (2003a) Pleosporales in Japan (1): the genus Lophiostoma. Mycoscience 44:85–96
Tanaka K, Harada Y (2003b) Pleosporales in Japan (2): Lophiotrema. Mycoscience 44:115–121
Tanaka K, Harada Y (2003c) Pleosporales in Japan (3). The genus Massarina. Mycoscience 44:173–185
Tanaka K, Hosoya T (2008) Lophiostoma sagittiforme sp. nov., a new ascomycete (Pleosporales, Dothideomycetes) from Island Yakushima in Japan. Sydowia 60:131–145
Tanaka K, Hatakeyama S, Harada Y (2005) Three new freshwater ascomycetes from rivers in Akkeshi, Hokkaido, northern Japan. Mycoscience 46:287–293
Tanaka K, Hirayama K, Yonezawa H, Hatakeyama S, Harada Y, Sano T, Shirouzu T, Hosoya T (2009) Molecular taxonomy of bambusicolous fungi: Tetraplosphaeriaceae, a new pleosporalean family with Tetraploa-like anamorphs. Stud Mycol 64:175–209
Tanaka K, Hirayama K, Iqbal SH (2010a) Massariosphaeria websteri sp. nov. and several members of the Pleosporales noteworthy to Pakistan. Mycol Balc 7:77–85
Tanaka K, Mel’nik VA, Kamiyama M, Hirayama K, Shirouzu T (2010b) Molecular phylogeny of two coelomycetous fungal genera with stellate conidia, Prosthemium and Asterosporium, on Fagales trees. Botany 88:1057–1071
Tang AMC, Hyde KD, Tsui KM, Corlett RT (2003) A new species of Lophiotrema from wild fruit in Hong Kong. Persoonia 18:265–269
Vijaykrishna D, Jeewon R, Hyde KD (2006) Molecular taxonomy, origins and evolution of freshwater ascomycetes. Fungal Divers 23:351–390
von Arx JA (1971) Testudinaceae, a new family of ascomycetes. Persoonia 6:365–369
White TJ, Bruns T, Lee S, Taylor J (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR protocols: a guide to methods and applications. Academic Press, San Diego, pp 315–322
Yuan Z, Zhao Z (1994) Studies on lophiostomataceous fungi from Xinjianf, China. Sydowia 46:162–184
Zhang Y, Schoch CL, Fournier J, Crous PW, De Gruyter J, Woudenberg JHC, Hirayama K, Tanaka K, Pointing SB, Spatafora JW, Hyde KD (2009a) Multi-locus phylogeny of Pleosporales: a taxonomic, ecological and evolutionary re-evaluation. Stud Mycol 64:85–102
Zhang Y, Wang HK, Fournier J, Crous PW, Jeewon R, Pointing SB, Hyde KD (2009b) Towards a phylogenetic clarification of Lophiostoma/Massarina and morphologically similar genera in the Pleosporales. Fungal Divers 38:225–251
Acknowledgments
This work was partially supported by grants from the Japan Society for the Promotion of Science (JSPS, 22770074), the Sasakawa Scientific Research Grant from the Japan Science Society, and the Hirosaki University Grant for Exploratory Research by Young Scientists (2008–2010). We thank Dr. Vadim A. Mel’nik (Komarov Botanical Institute, Russia) for reviewing the draft manuscript and our reviewers for their valuable comments.
Author information
Authors and Affiliations
Corresponding author
About this article
Cite this article
Hirayama, K., Tanaka, K. Taxonomic revision of Lophiostoma and Lophiotrema based on reevaluation of morphological characters and molecular analyses. Mycoscience 52, 401–412 (2011). https://doi.org/10.1007/s10267-011-0126-3
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s10267-011-0126-3