Skip to main content
Log in

Amino acid sequences of hemoglobin β chains of five species of pinnipeds:Neophoca cinerea, Otaria byronia, Eumetopias jubatus, Pusa hispida, andPagophilus groenlandica

  • Published:
Journal of Protein Chemistry Aims and scope Submit manuscript

Abstract

Pinnipeds (Otariidae, Odobenidae, and Phocidae) in the order Carnivora have one or two types (Hb I and Hb II) of hemoglobin components. These hemoglobins consist of identicalβ chains and differentα chains. We determined the complete amino acid sequences of the hemoglobinβ chain of three species of Otariidae (Australian sea lion, South American sea lion, and northern sea lion) and two species of Phocidae (ringed seal and harp seal) from intactβ chain and chemical cleavage fragments. The sequences are similar toβ chains of the already known sequences of pinnipeds. These sequences were compared with those of other carnivores (Mustelidae, Ursidae, Canidae, and Felidae) and adult human hemoglobinβ chain. Using Artiodactyla (pig) as an outgroup, we find that the tree constructed by means of phylogenetic analysis shows that Odobenidae is closest to Otariidae, and that Otariidae and Odobenidae are closer to Mustelidae than to Phocidae.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Adachi, J., and Hasegawa, M. (1992).MOLPHY: Programs for Molecular Phylogenetics, I. PROTML: Maximum Likelihood Inference of Protein Phylogeny, Institute of Statistical Mathematics, Tokyo.

    Google Scholar 

  • Àrnason, U., and Widegren, B. (1986). Pinniped phylogeny enlightened by molecular hybridizations using highly repetitive DNA,Mol. Biol. Evol. 3, 356–365.

    Google Scholar 

  • Àrnason, U., Gullberg, A., Johnsson, E., and Ledje, C. (1993). The nucleotide sequence of the mitochondrial DNA molecule of the grey seal,Halichoerus grypus, and a comparison with mitochondrial sequences of other true seals,J. Mol. Evol. 37, 323–330.

    Article  PubMed  Google Scholar 

  • Àrnason, U., Bodin, K., Gullberg, A., Ledje, C., and Mouchaty, S. (1995). A molecular view of pinniped relationships with particular emphasis on the true seals,J. Mol. Evol. 40, 78–85.

    Article  PubMed  Google Scholar 

  • Burns, J. J., and Fay, F. H. (1970). Comparative morphology of the skull of the ribbon seal,Histriophoca fasciata, with remarks on systematics of Phocidae,J. Zool. 161, 363–394.

    Article  Google Scholar 

  • Cao, Y., Adachi, J., Janke, A., Paabo, S., and Hasegawa, M. (1994). Phylogenetic relationships among Eutherian orders estimated from inferred sequences of mitochondrial proteins: Instability of a tree based on a single gene,J. Mol. Evol. 39, 519–527.

    Article  CAS  PubMed  Google Scholar 

  • Felstenstein, J. (1989). PHYLIP-Phylogeny Inference Package (Version 3.2),Cladistics 5, 164–166.

    Google Scholar 

  • Felsenstein, J. (1993). PHYLIP (Phylogeny Inference Package) Version 3.5c [available from the author, Department of Genetics, University of Washington, Seattle].

    Google Scholar 

  • Fermi, G., Perutz, M. F., Shaanan, B., and Fourme, R. (1984). The crystal structure of human deoxyhemoglobin at 1.74 Å resolution,J. Mol. Biol. 175, 159–174.

    Article  CAS  PubMed  Google Scholar 

  • Gross, E. (1967). The cyanogen bromid reaction,Meth. Enzymol. 11, 238–254.

    Article  CAS  Google Scholar 

  • Jahan, M., Ahmed, A., Trillmich, F., and Braunitzer, G. (1991). The complete primary structure of the marine carnivora, Galapagoes fur seal (Arctocephalus galapagoensis, Otariidae) hemoglobins,J. Protein Chem. 10, 257–263.

    Article  CAS  PubMed  Google Scholar 

  • Landon, M. (1977). Cleavage at aspartyl-prolyl bonds,Meth. Enzymol. 47, 145–149.

    Article  CAS  Google Scholar 

  • Li, W.-H., Gouy, M., Sharp, P. M., O'hVigin, C., and Yang, Y.-W. (1990). Molecular phylogeny of Rodentia, Lagomorpha, Primates, Artiodactyla, and Carnivora and molecular clocks,Proc. Natl. Acad. Sci. USA 87, 6703–6707.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Lin, H.-X., Kleinschmidt, T., Johnson, M. L., and Braunitzer, G. (1989a). Carnivora: The primary structure of the Pacific Walrus (Odobenus rosmarus divergens, Pinnipedia) hemoglobin,Biol. Chem. Hoppe-Seyler 370, 135–140.

    Article  CAS  PubMed  Google Scholar 

  • Lin, H.-X., Kleinschmidt, M. L., Braunitzer, G., and Scheil, H.-G. (1989b). Carnivora: The primary structure of Weddell seal (Leptonychotes weddelli, Pinnipedia) hemoglobin,Biol. Chem. Hoppe-Seyler 370, 707–713.

    Article  CAS  PubMed  Google Scholar 

  • McLaren, I. A. (1960). Are the Pinnipedia biphyletic?Syst. Zool. 9, 18–28.

    Article  Google Scholar 

  • Sarich, V. M. (1969). Pinniped phylogeny,Syst. Zool. 18, 416–422.

    Article  CAS  PubMed  Google Scholar 

  • Tedford, R. H. (1976). Relationship of pinnipeds to other carnivores (mammalia),Syst. Zool. 25, 363–367.

    Article  Google Scholar 

  • Watanabe, B., Maita, T., Matsuda, G., Goodman, M., and Johnson, M. L. (1986). Amino-acid sequence of theα andβ chains of adult hemoglobin of the Harbor seal,Phoca vitulina, Biol. Chem. Hoppe-Seyler 367, 1251–1258.

    Article  CAS  PubMed  Google Scholar 

  • Wyss, A. R. (1988). Evidence from flipper structure for a single origin of pinnipeds,Nature 334, 427–428.

    Article  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Ikehara, T., Eguchi, Y., Kayo, S. et al. Amino acid sequences of hemoglobin β chains of five species of pinnipeds:Neophoca cinerea, Otaria byronia, Eumetopias jubatus, Pusa hispida, andPagophilus groenlandica. J Protein Chem 15, 659–665 (1996). https://doi.org/10.1007/BF01886748

Download citation

  • Received:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF01886748

Key words

Navigation