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Molecular characterization and expression analysis of fat mass and obesity-associated gene in rabbit

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Abstract

Fat mass and obesity-associated (FTO) gene codes for a nuclear protein of the AlkB related nonhaem iron and 2-oxoglutarate-dependent oxygenase superfamily, and is involved in animal fat deposition and human obesity. In this work, the molecular characterization and expression features of rabbit (Oryctolagus cuniculus) FTO cDNA were analysed. The rabbit FTO cDNA with a size of 2158 bp was cloned, including 1515 bp of the open reading frame that encoded a basic protein of 504 amino acids. Homologous comparison indicated that the rabbit FTO shared 36.36–91.88% identity with those from other species and phylogenetic analysis showed that the rabbit FTO is closely related to human, but more distantly related to zebrafish. The New Zealand rabbit FTO mRNA was detected in all tissues examined, with the highest levels found in the spleen and the lowest found in the kidney. However, no significant differences were seen in cerebellum, corpora quadrigemina, medulla oblongata and cerebral cortex of commercial adult rabbits. Moreover, mRNA levels of FTO in liver tissues were significantly increased in lactating New Zealand rabbits compared with 70-day-old, 90-day-old and gestating rabbits (P < 0.05). In contrast, FTO mRNA levels were significantly lower in longissimus dorsi muscle of 90-day-old New Zealand rabbits than in 70-day-old rabbits (P < 0.05). However, the expression levels of FTO in mammary gland and ovary of gestating and lactating rabbits were not significantly different (P > 0.05).

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References

  • Almén M. S., Jacobsson J. A., Moschonis G., Benedict C., Chrousos G. P., Fredriksson R. and Schiöth H. B. 2012 Genome wide analysis reveals association of a FTO gene variant with epigenetic changes. Genomics 99, 132–137.

    Article  PubMed  Google Scholar 

  • Dina C., Meyre D., Gallina S., Durand E., Korner A., Jacobson P. et al. 2007 Variation in FTO contributes to childhood obesity and severe adult obesity. Nat. Genet. 39, 724–726.

    Article  CAS  PubMed  Google Scholar 

  • Dlouha D., Pitha J., Lanska V. and Hubacek J. A. 2012 Association between FTO 1st intron tagging variant and telomere length in middle aged females. 3PMFs study. Clin. Chim. Acta 413, 1222–1225.

    Article  CAS  PubMed  Google Scholar 

  • Dvořáková V., Bartenschlager H., Stratil A., Horák P., Stupka R., Čítek J. et al. 2012 Association between polymorphism in the FTO gene and growth and carcass traits in pig crosses. Genet. Sel. Evol. 44, 13.

    Article  PubMed Central  PubMed  Google Scholar 

  • Fan B., Du Z. Q. and Rothschild M. F. 2009 The fat mass and obesity-associated (FTO) gene is associated with intramuscular fat content and growth rate in the pig. Anim. Biotechnol. 20, 58–70.

    Article  CAS  PubMed  Google Scholar 

  • Fischer J., Koch L., Emmerling C., Vierkotten J., Peters T., Bruning J. C. and Ruther U. 2009 Inactivation of the FTO gene protects from obesity. Nature 458, 894–898.

    Article  CAS  PubMed  Google Scholar 

  • Fontanesi L., Scotti E., Buttazzoni L., Davoli R. and Russo V. 2009 The porcine fat mass and obesity associated (FTO) gene is associated with fat deposition in Italian Duroc pigs. Anim. Genet. 40, 90–93.

    Article  CAS  PubMed  Google Scholar 

  • Fontanesi L., Scotti E., Buttazzoni L., Dall’Olio S., Bagnato A., Lo Fiego D. P. et al. 2010 Confirmed association between a single nucleotide polymorphism in the FTO gene and obesity-related traits in heavy pigs. Mol. Biol. Rep. 37, 461–466.

    Article  CAS  PubMed  Google Scholar 

  • Frayling T. M., Timpson N. J., Weedon M. N., Zeggini E., Freathy R. M., Lindgren C. M. et al. 2007 A common variant in the FTO gene is associated with body mass index and predisposes to childhood and adult obesity. Science 316, 889–894.

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Gerken T., Girard C. A., Tung Y. C., Webby C. J., Saudek V., Hewitson K. S. et al. 2007 The obesity-associated FTO gene encodes a 2-oxoglutarate-dependent nucleic acid demethylase. Science 318, 1469–1472.

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Han Z., Niu T., Chang J., Lei X., Zhao M., Wang Q. et al. 2010 Crystal structure of the FTO protein reveals basis for its substrate specificity. Nature 464, 1205–1209.

    Article  CAS  PubMed  Google Scholar 

  • Huang J. M., Liu G., Liu Y. P., Yao Y. C., Wu K. L. and Fang M. Y. 2010 Splice variant identification and expression analysis of the fat mass and obesity-associated (FTO) gene in intact and castrated male pigs. DNA Cell Biol. 29, 729–733.

    Article  CAS  PubMed  Google Scholar 

  • Jia G., Yang C. G., Yang S., Jian X., Yi C., Zhou Z. and He C. 2008 Oxidative demethylation of 3-methylthymine and 3-methyluracil in single-stranded DNA and RNA by mouse and human FTO. FEBS Lett. 582, 3313–3319.

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Jia X., Nie Q., Lamont S. J. and Zhang X. 2012 Variation in sequence and expression of the avian FTO, and association with glucose metabolism, body weight, fatness and body composition in chickens. Int. J. Obes. (Lond) 36, 1054–1061.

    Article  CAS  Google Scholar 

  • López-Bermejo A., Petry C. J., Díaz M., Sebastiani G., de Zegher F., Dunger D. B. and Ibáňez L. 2008 The association between the FTO gene and fat mass in humans develops by the postnatal age of two weeks. J. Clin. Endocrinol. Metab. 93, 1501–1505.

    Article  PubMed  Google Scholar 

  • Madsen M. B., Birck M. M., Fredholm M. and Cirera S. 2010 Expression studies of the obesity candidate gene FTO in pig. Anim. Biotechnol. 21, 51–63.

    Article  CAS  PubMed  Google Scholar 

  • Peters T., Ausmeier K. and Rüther U. 1999 Cloning of Fatso (FTO), a novel gene deleted by the Fused toes (Ft) mouse mutation. Mamm. Genome. 10, 983–986.

    Article  CAS  PubMed  Google Scholar 

  • Sanchez-Pulido L. and Andrade-Navarro M. A. 2007 The FTO (fat mass and obesity associated) gene codes for a novel member of the non-heme dioxygenase superfamily. BMC Biochem. 8, 23.

    Article  PubMed Central  PubMed  Google Scholar 

  • Sébert S. P., Hyatt M. A., Chan L. L., Yiallourides M., Fainberg H. P., Patel N. et al. 2010 Influence of prenatal nutrition and obesity on tissue specific fat mass and obesity-associated (FTO) gene expression. Reproduction 139, 265–274.

    Article  PubMed  Google Scholar 

  • Tiwari A., Krzysik-Walker S. M. and Ramachandran R. 2012 Cloning and characterization of chicken fat mass and obesity associated (FTO) gene: fasting affects FTO expression. Domest. Anim. Endocrinol. 42, 1–10.

    Article  CAS  PubMed  Google Scholar 

  • Van der Hoeven F., Schimmang T., Volkmann A., Mattei M. G., Kyewski B. and Ruther U. 1994 Programmed cell death is affected in the novel mouse mutant fused toes (Ft). Development 120, 2601–2607.

    PubMed  Google Scholar 

  • Wåhlén K., Sjölin E. and Hoffstedt J. 2008 The common rs9939609 gene variant of the fat mass- and obesity-associated gene FTO is related to fat cell lipolysis. J. Lipid. Res. 49, 607–611.

    Article  PubMed  Google Scholar 

  • Wang Y. F., Rao K. Q., Yuan L. X., Everaert N., Buyse J., Grossmann R. and Zhao R. Q. 2012 Chicken FTO gene: tissue-specific expression, brain distribution, breed difference and effect of fasting. Comp. Biochem. Physiol. A 163, 246–252.

    Article  CAS  Google Scholar 

  • Wei S. J., Zan L. S., Ujan J. A., Wang H. B., Yang Y. J. and Adoligbe C. 2011 Novel polymorphism of the bovine fat mass and obesity-associated (FTO) gene are related to backfat thickness and longissimus muscle area in five Chinese native cattle breeds. Afr. J. Biotechnol. 10, 2820–2824.

    CAS  Google Scholar 

  • Wing M. R., Ziegler Z., Langefeld C. D., Ng M. C. Y., HaVner S. M., Norris J. M. et al. 2009 Analysis of FTO gene variants with measures of obesity and glucose homeostasis in the IRAS family study. Hum. Genet. 125, 615–626.

    Article  PubMed Central  PubMed  Google Scholar 

  • Zhang B., Zhang Y., Zhang L. Z., Wang J., Li Z. J. and Chen H. 2011 Allelic polymorphism detected in the bovine FTO gene. Mol. Biotechnol. 49, 257–262.

    Article  CAS  PubMed  Google Scholar 

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Acknowledgements

The authors gratefully acknowledge Dr Davide Faggionato for valuable suggestions and revisions of the manuscript. This work was supported by Doctoral Programme Foundation of Linyi University (no. BS08019), the Natural Science Foundation of Shandong Province (BS2010NY002) and Chinese National Programs for High Technology Research and Development (863) (no. 2007AA10Z153).

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[Xing J., Jing W. and Jiang Y. 2013 Molecular characterization and expression analysis of fat mass and obesity-associated gene in rabbit. J. Genet. 92, xx–xx]

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XING, J., JING, W. & JIANG, Y. Molecular characterization and expression analysis of fat mass and obesity-associated gene in rabbit. J Genet 92, 481–488 (2013). https://doi.org/10.1007/s12041-013-0298-z

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