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Structure of the N-glycans from the chlorovirus NE-JV-1

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Abstract

Results from recent studies are breaking the paradigm that all viruses depend on their host machinery to glycosylate their proteins. Chloroviruses encode several genes involved in glycan biosynthesis and some of their capsid proteins are decorated with N-linked oligosaccharides with unique features. Here we describe the elucidation of the N-glycan structure of an unusual chlorovirus, NE-JV-1, that belongs to the Pbi group. The host for NE-JV-1 is the zoochlorella Micractinium conductrix. Spectroscopic analyses established that this N-glycan consists of a core region that is conserved in all of the chloroviruses. The one difference is that the residue 3OMe-l-rhamnose is acetylated at the O-2 position in a non-stoichiometric fashion.

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References

  • De Castro C, Molinaro A, Piacente F, Gurnon JR, Sturiale L, Palmigiano A, Lanzetta R, Parrilli M, Garozzo D, Tonetti M, Van Etten JL (2013) Structure of N-linked oligosaccharides attached to chlorovirus PBCV-1 major capsid protein reveals unusual class of complex N-glycans. Proc Natl Acad Sci USA 110:13956–13960. doi:10.1073/pnas.1313005110

    Article  PubMed  PubMed Central  Google Scholar 

  • De Castro C, Speciale I, Duncan G, Dunigan DD, Agarkova I, Lanzetta R, Sturiale L, Palmigiano A, Garozzo D, Molinaro A, Tonetti M, Van Etten JL (2016) N-linked glycans of chloroviruses sharing a core architecture without precedent. Angew Chem Int Ed 55:654–658. doi:10.1002/anie.201509150

    Article  Google Scholar 

  • Doms RW, Lamb RA, Rose JK, Helenius A (1993) Folding and assembly of viral membrane proteins. Virology 193:545–562

    Article  CAS  PubMed  Google Scholar 

  • Jeanniard A, Dunigan DD, Gurnon JR, Agarkova IV, Kang M, Vitek J, Duncan G, McClung OW, Larsen M, Claverie J-M, Van Etten JL, Blanc G (2013) Towards defining the chloroviruses: a genomic journey through a genus of large DNA viruses. BMC Genom 14:158

    Article  CAS  Google Scholar 

  • Marchetti R, Perez S, Arda A, Imberty A, Jiménez-Barbero J, Silipo A, Molinaro A (2016) “Rules of Engagement” of protein-glycoconjugate interactions: a molecular view achievable by using NMR spectroscopy and molecular modeling. Chemistry Open 5(4):274–296. doi:10.1002/open.201600024

    CAS  PubMed  PubMed Central  Google Scholar 

  • Olofsson S, Hansen JES (1998) Host cell glycosylation of viral glycoproteins—a battlefield for host defense and viral resistance. Scand J Infect Dis 30:435–440

    Article  CAS  PubMed  Google Scholar 

  • Quispe CF, Esmael A, Sonderman O, McQuinn M, Agarkova I, Battah M, Duncan GA, Dunigan DD, Smith TPL, De Castro C, Speciale I, Ma F, Van Etten JL (2016) Characterization of a new chlorovirus type with permissive and non-permissive features on phylogenetically related algal strains. Virology 500:103–113

    Article  PubMed  Google Scholar 

  • Van Etten JL, Dunigan DD (2012) Chloroviruses: not yet everyday plant virus. Trends Plant Sci 17:1–8

    Article  PubMed  Google Scholar 

  • Van Etten JL, Dunigan DD (2016) Giant chloroviruses: five easy questions. PLoS Pathog 12:e1005751. doi:10.1371/journal.ppat.1005751

    Article  PubMed  PubMed Central  Google Scholar 

  • Van Etten JL, Gurnon JR, Yanai-Balser GM, Dunigan DD, Graves MV (2010) Chlorella viruses encode most, if not all, of the machinery to glycosylate their glycoproteins independent of the endoplasmic reticulum and Golgi. Biochem Biophys Acta 1800:152–159

    Article  PubMed  Google Scholar 

  • Vigerust DL, Shepherd VL (2007) Virus glycosylation: role in virulence and immune interactions. Trends Microbiol 15:211–218

    Article  CAS  PubMed  Google Scholar 

  • Yamada T, Onimatsu H, Van Etten JL (2006) Chlorella viruses. Adv Virus Res 66:293–336

    Article  CAS  PubMed  PubMed Central  Google Scholar 

Download references

Acknowledgements

Funding for this study was partially provided by the NSF-EPSCoR Grant EPS-1004094 (JVE), the COBRE program of the National Center for Research Resources Grant P20-RR15535 (JVE), and National Institute for General Medical Science Grant 8P20GM103427 (to G.D.).

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Correspondence to Immacolata Speciale.

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Speciale, I., Agarkova, I., Duncan, G.A. et al. Structure of the N-glycans from the chlorovirus NE-JV-1. Antonie van Leeuwenhoek 110, 1391–1399 (2017). https://doi.org/10.1007/s10482-017-0861-3

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  • DOI: https://doi.org/10.1007/s10482-017-0861-3

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