Abstract
A fluorescent platform was developed for the determination and visualization of circulating tumor cells by a toehold-mediated bifunctional DNA nanomachine. In the presence of target tumor cells, the DNA nanomachine was activated. Multiple DNA products were formed, including dendritic DNA products and double-strand DNA products. Dendritic DNA products bound to their target cells for the visualization, while double-strand DNA products were released for the determination of tumor cells. At fluorescence excitation and emission wavelengths of 530 and 550 nm, this method could detect as low as 43 cells/mL (S/N = 3) with a linear range of 100 to 10,000 cells/mL. In clinical hydrothorax samples, this platform exhibited high reliability with a recovery of 93 to 116%. At the fluorescence excitation and emission wavelengths of 490 and 515 nm, the specificity and biocompatibility of this method were further verified by tumor cells imaging. Furthermore, the robustness of the toehold-mediated bifunctional DNA nanomachine was demonstrated by the specific gene mutation detection in single-cell analysis.
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Chen J, Cao SW, Situ B, Zhong J, Hu YW, Li SF, Huang JL, Xu JS, Wu SY, Lin JD, Zhao QW, Cai Z, Zheng L, Wang Q (2018) Metabolic reprogramming-based characterization of circulating tumor cells in prostate cancer. J Exp Clin Cancer Res 37(1):127
Zhang HA, Ke H, Wang YF, Li PW, Huang CS, Jia NQ (2018) 3D carbon nanosphere and gold nanoparticle-based voltammetric cytosensor for cell line A549 and for early diagnosis of non-small cell lung cancer cells. Microchim Acta 186(1):39
Shi YM, Zhang GC, Wang YL, Ren CY, Wen LZ, Zhu WZ, Chen XQ, Liao N (2018) Presence of circulating tumor cells is associated with metabolic-related variables in postoperative patients with early-stage breast cancer. Chin J Cancer Res 30(3):340–350
Qiao YY, Lin KX, Zhang Z, Zhang DJ, Shi CH, Xiong M, Qu XH, Zhao XH (2015) Monitoring disease progression and treatment efficacy with circulating tumor cells in esophageal squamous cell carcinoma: a case report. World J Gastroenterol 21(25):7921–7928
Ma SH, Ling FH, Gui AP, Chen SF, Sun YX, Li Z (2017) Predictive value of circulating tumor cells for evaluating short- and long-term efficacy of chemotherapy for breast cancer. Med Sci Monit 23:4808–4816
Weigelt B, Peterse JL, Veer LJ (2005) Breast cancer metastasis: markers and models. Nat Rev Cancer 5(8):591–602
Shen ZY, Wu AG, Chen XY (2017) Current detection technologies for circulating tumor cells. Chem Soc Rev 46(8):2038–2056
Nellore BP, Kanchanapally R, Pramanik A, Sinha SS, Chavva SR, Hamme A, Ray PC (2015) Aptamer-conjugated graphene oxide membranes for highly efficient capture and accurate identification of multiple types of circulating tumor cells. Bioconjug Chem 26(2):235–242
Cao J, Zhao XP, Younis MR, Li ZQ, Xia XH, Wang C (2017) Ultrasensitive capture, detection, and release of circulating tumor cells using a nanochannel–ion channel hybrid coupled with electrochemical detection technique. Anal Chem 89(20):10957–10964
Lianidou ES (2016) Gene expression profiling and DNA methylation analyses of CTCs. Mol Oncol 10(3):431–442
Wang HY, Ahn SW, Kim SY, Park SY, Jung DJ, Park SJ, Han HJ, Sohn J, Kim S, Lee HY (2015) Detection of circulating tumor cell-specific markers in breast cancer patients using the quantitative RT-PCR assay. Int J Clin Oncol 20(5):878–890
Li M, Anand RK (2017) High-throughput selective capture of single circulating tumor cells by dielectrophoresis at a wireless electrode array. J Am Chem Soc 139(26):8950–8959
Wang ZH, Yu RZ, Zeng H, Wang XX, Luo SZ, Li WH, Luo XL, Yang T (2019) Nucleic acid-based ratiometric electrochemiluminescent,electrochemical and photoelectrochemical biosensors: a review. Microchim Acta 186(7):405
Chen QH, Hu WB, Shang B, Wei J, Chen L, Guo XJ, Ran FY, Chen W, Ding XR, Xu Y, Wu YH (2018) Ultrasensitive amperometric aptasensor for the epithelial cell adhesion molecule by using target-driven toehold-mediated DNA recycling amplification. Microchim Acta 185(3):202
Zhai TT, Ye D, Zhang QW, Wu ZQ, Xia XH (2017) Highly efficient capture and electrochemical release of circulating tumor cells by using aptamers modified gold nanowire arrays. ACS Appl Mater Interfaces 9(40):34706–34714
Zhang Y, Luo SH, Situ B, Chai ZX, Li B, Liu JM, Zheng L (2018) A novel electrochemical cytosensor for selective and highly sensitive detection of cancer cells using binding-induced dual catalytic hairpin assembly. Biosens Bioelectron 102:568–573
Li JY, Liu SY, Sun LQ, Li W, Zhang SY, Yang S, Li J, Yang HH (2018) Amplified visualization of protein-specific glycosylation in zebrafish via proximity-induced hybridization chain reaction. J Am Chem Soc 140(48):16589–16595
Zhang J, Shikha S, Mei QS, Liu JL, Zhang Y (2019) Fluorescent microbeads for point-of-care testing: a review. Microchim Acta 186(6):361
Wu LL, Wen CY, Hu J, Tang M, Qi CB, Li N, Liu C, Chen L, Pang DW, Zhang ZL (2017) Nanosphere-based one-step strategy for efficient and nondestructive detection of circulating tumor cells. Biosens Bioelectron 94:219–226
Li JJ, Li WN, Du WF, Lv MM, Wu ZK, Jiang JH (2018) Target induced reconstruction of DNAzymatic amplifier nanomachines in living cells for concurrent imaging and gene silencing. Chem Commun 54(75):10626–10629
Liu JM, Zhang Y, Zhao QW, Situ B, Zhao JM, Luo SH, Li B, Yan XH, Vadgama P, Su L, Ma W, Wang W, Zheng L (2018) Bifunctional aptamer-mediated catalytic hairpin assembly for the sensitive and homogenous detection of rare cancer cells. Anal Chim Acta 1029:58–64
Ding CP, Zhang CL, Yin XY, Cao XY, Cai MF, Xian YZ (2018) Near-infrared fluorescent Ag2S nanodot-based signal amplification for efficient detection of circulating tumor cells. Anal Chem 90(11):6702–6709
Huang J, Wang H, Yang XH, Quan K, Yang YJ, Ying L, Xie NL, Ou M, Wang KM (2016) Fluorescence resonance energy transfer-based hybridization chain reaction for in situ visualization of tumor-related mRNA. Chem Sci 7(6):3829–3835
Li Z, Wang GL, Shen Y, Guo NN, Ma N (2018) DNA-templated magnetic nanoparticle-quantum dot polymers for ultrasensitive capture and detection of circulating tumor cells. Adv Funct Mater 28(14):1701752
Song P, Ye DK, Zuo XL, Li J, Wang JB, Liu HJ, Hwang MT, Chao J, Su S, Wang LH, Shi JY, Wang LH, Huang W, Lal R, Fan CH (2017) DNA hydrogel with aptamer-toehold-based recognition, cloaking, and decloaking of circulating tumor cells for live cell analysis. Nano Lett 17(9):5193–5198
Jiang XY, Wang HJ, Wang HJ, Zhuo Y, Yuan R, Chai YQ (2017) Electrochemiluminescence biosensor based on 3-D DNA nanomachine signal probe powered by protein-aptamer binding complex for ultrasensitive mucin 1 detection. Anal Chem 89(7):4280–4286
Bi S, Cui YY, Dong Y, Zhang NB (2014) Target-induced self-assembly of DNA nanomachine on magnetic particle for multi-amplified biosensing of nucleic acid, protein, and cancer cell. Biosens Bioelectron 53:207–213
Li F, Zhang HQ, Wang ZX, Li XK, Li XF, Le XC (2013) Dynamic DNA assemblies mediated by binding-induced DNA strand displacement. J Am Chem Soc 135(7):2443–2446
Liang CP, Ma PQ, Liu H, Guo X, Yin BC, Ye BC (2017) Rational engineering of a dynamic, entropy-driven DNA nanomachine for intracellular MicroRNA imaging. Angew Chem Int Ed 56(31):9077–9081
Zhang P, Jiang J, Yuan R, Zhuo Y, Chai YQ (2018) Highly ordered and field-free 3D DNA nanostructure: the next generation of DNA nanomachine for rapid single-step sensing. J Am Chem Soc 140(30):9361–9364
Yang TY, Fang J, Guo YC, Sheng SC, Pu QL, Zhang L, Ou XY, Dai L, Xie GM (2019) Fluorometric determination of microRNA by using an entropy-driven three-dimensional DNA walking machine based on a catalytic hairpin assembly reaction on polystyrene microspheres. Microchim Acta 186(8):574
Ma F, Wei SH, Zhang CY (2019) Construction of a robust entropy-driven DNA nanomachine for single-molecule detection of rare cancer cells. Anal Chem 91(12):7505–7509
Li TT, Liu H, Yu J, Shi GY, Zhao LY, Li GX (2018) Prognostic and predictive blood biomarkers in gastric cancer and the potential application of circulating tumor cells. World J Gastroenterol 24(21):2236–2246
Wang DL, Liu B, Ma Y, Wu CW, Mou QB, Deng HP, Wang RB, Yan DY, Zhang C, Zhu XY (2017) A molecular recognition aApproach to synthesize nucleoside analogue based multifunctional nanoparticles for targeted cancer therapy. J Am Chem Soc 139(40):14021–14024
Wu JH, Song CC, Jiang CX, Shen X, Qiao Q, Hu YQ (2013) Nucleolin targeting AS1411 modified protein nanoparticle for antitumor drugs delivery. Mol Pharm 10(10):3555–3563
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This study was supported by the National Natural Science Foundation of China (81802114 and 81871735) and the Science and Technology Planning Project of Guangdong Province (2017A020215123).
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Zhang, Y., Luo, S., Situ, B. et al. A fluorescent immunosensor for determination and imaging of circulating tumor cells based on a bifunctional DNA nanomachine. Microchim Acta 187, 259 (2020). https://doi.org/10.1007/s00604-020-4205-z
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DOI: https://doi.org/10.1007/s00604-020-4205-z