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Oligonucleotide Synthesis

Phosphotriester Approach

  • Protocol
Protocols for Oligonucleotides and Analogs

Part of the book series: Methods in Molecular Biology ((MIMB,volume 20))

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Abstract

Over the last 30 years or so, the chemical synthesis of deoxyribonucleic acid (DNA) and ribonucleic acid (RNA) has constituted one of the most challenging problems in the field of the synthetic organic chemistry of natural products. In more recent times, attention has been focused not on “natural” nucleic acid fragments, but on the preparation of nucleic acids bearing modified internucleotidic linkages or modified bases in an effort to enhance stability to nucleases and increase cellular uptake.

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References

  1. Reese, C. B. (1978) Tetrahedron 34, 3143.

    Article  CAS  Google Scholar 

  2. For other general reviews on the chemical synthesis of DNA, see refs. 4 and 5; Sonveaux, E. (1986) Bioorg. Chem. 14, 274–325; English, U. and Gauss, D. H. (1991) Augew. Chem. Int. Ed. Engl. 30,613–722; Uhlmann, E. and Peyman, A. (1990) Chem. Rev. 90, 544–584; Davies, J. E. and Gassen, H. G. (1983) Angew. Chem. Int. Ed. Engl. 22, 13–31.

    Article  CAS  Google Scholar 

  3. Gait, M. J., Singh, M., Sheppard, R. C, Edge, M. D., Greene, A. R., Heathcliffe, G. R., Atkinson, T. C, Newton, C. R., and Markham, A. F. (1980) Nucl. Acids Res. 8, 1081–1096.

    Article  CAS  Google Scholar 

  4. Gait, M. J., Matthes, H. W. D., Singh, M., Sproat, B. S., and Titmas, R. C. (1982) Nucleic Acids Res. 10, 6243–6254.

    Article  CAS  Google Scholar 

  5. Gait, M. J. (ed.) (1984) Oligonucleotide Synthesis. A Practical Approach. IRL Press, Oxford Chapter 4.

    Google Scholar 

  6. For a review, see Caruthers, M. H. (1991) Acc. Chem. Res. 24, 278–284.

    Article  CAS  Google Scholar 

  7. Gough, G. R., Brunden, M. J., and Gilham, P. T. (1981) Tetrahedron Lett. 22, 4177–4180.

    Article  CAS  Google Scholar 

  8. Koster, H., Stumpe, A., and Wolter, A. (1983) Tetrahedron Lett. 24, 747–750.

    Article  Google Scholar 

  9. Sproat, B. S. and Bannwarth, W. (1983) Tetrahedron Lett. 24, 5771–5774.

    Article  CAS  Google Scholar 

  10. Atherton, E., Brown, E., Sheppard, R. C, and Rosevear, A. (1981) J. Chem. Soc. Commun., 1151–1152.

    Google Scholar 

  11. Chattopadhyaya, J. B. and Reese, C. B. (1978) J. Chem. Soc. Commun. 639–640.

    Google Scholar 

  12. Schaller, H., Weimann, B., Lerch, B., and Khorana, H. G. (1963)7. Am. Chem. Soc. 85, 3821–3827.

    Article  CAS  Google Scholar 

  13. Reese, C. B. (1970) Colloques International du C.N.R.S. 182, 319–328.

    Google Scholar 

  14. Reese, C. B., Titmas, R. C, and Yau, L. (1978) Tetrahedron Lett. 30, 2727–2730.

    Google Scholar 

  15. Reese, C. B. and Zard, L. (1981) Nucl. Acids Res. 9, 4611–4626.

    Article  CAS  Google Scholar 

  16. Khorana, H. G. (1968) Pure Appl. Chem. 17, 349–381.

    Article  CAS  Google Scholar 

  17. Agarwal, K. L., Yamazaki, A., Cashion, P. J., and Khorana, H. G. (1972) Angew. Chem. Int. Ed. Engl. 11, 451–459.

    Article  CAS  Google Scholar 

  18. Kuwe, A., Sekine, M., and Hata, T. (1982) Tetrahedron Lett. 23, 4365–4368.

    Article  Google Scholar 

  19. Kuwe, A., Sekine, M., and Hata, T. (1983) Chem. Lett. 1597–1600.

    Google Scholar 

  20. Froehler, B. C. and Matteucci, M. D. (1983) Nucl. Acids Res. 11, 8031–8036.

    Article  CAS  Google Scholar 

  21. Cohen, A. S., Najaman, D. R., Paulus, A., Guttman, A., Smith, J. A., and Karger, B. L. (1988) Proc. Natl. Acad. Sci. USA 85, 9660–9663.

    Article  CAS  Google Scholar 

  22. Guttman, A., Cohen, A. S., Heiger, D. N., and Karger, B. L. (1990) Anal. Chem. 62, 137–141.

    Article  CAS  Google Scholar 

  23. Efimov, U. A., Reverdatto, S. V., and Chakhmakhcheva, O. G. (1982) Nucl. Acids Res. 10, 6675–6694.

    Article  CAS  Google Scholar 

  24. Ejimov, V. A., Chakhmakhcheva, O. G., and Ovchinnikov, Y. A. (1985) Nucl. Acids Res. 13, 3651–3666.

    Article  Google Scholar 

  25. Froehler, B. C. and Matteucci, M. D. (1985) J. Am. Chem. Soc. 107, 278–279.

    Article  CAS  Google Scholar 

  26. Sproat, B. S., Rider, P., and Beijer, B. (1986) Nucl. Acids Res. 14, 1811–1824.

    Article  CAS  Google Scholar 

  27. Efimov, V. A., Burgakova, A. A., Dubey, I. Y., Polushin, N. N., Chakhmakhcheva, O. G., and Orchinnikov, Y. A. (1986) Nucl. Acids Res. 14, 6525–6540.

    Article  CAS  Google Scholar 

  28. Reese, C. B. and Ubasawa, A. (1980) Tetrahedron Lett. 21, 2265–2268.

    Article  CAS  Google Scholar 

  29. Kamimura, T., Tsuchiya, M, Koura, K., Sekine, M, and Hata, T. (1983) Tetrahedron Lett. 24, 2775–2778.

    Article  CAS  Google Scholar 

  30. Trichtinger, T., Charubala, R., and Pfleiderer, W. (1983) Tetrahedron Lett. 24, 711–714.

    Article  CAS  Google Scholar 

  31. Jones, S. S., Reese, C. B., Sibanda, S., and Ubasawa, A. (1981) Tetrahedron Lett. 22, 4755–4758.

    Article  CAS  Google Scholar 

  32. Reese, C. B. and Skone, P. A. (1984) J. Chem. Soc. Perkin Trans. 1, 1263–1271.

    Article  Google Scholar 

  33. Boom, J. H. van, Burgers, P. M. J., Deursen, P. H. van, Rooy, J. F. M., and Reese, C. B. (1976)7. Chem. Soc. Chem. Commun. 167, 168.

    Google Scholar 

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© 1993 Humana Press Inc., Totowa, NJ

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Christodoulou, C. (1993). Oligonucleotide Synthesis. In: Agrawal, S. (eds) Protocols for Oligonucleotides and Analogs. Methods in Molecular Biology, vol 20. Humana Press. https://doi.org/10.1385/0-89603-281-7:19

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  • DOI: https://doi.org/10.1385/0-89603-281-7:19

  • Publisher Name: Humana Press

  • Print ISBN: 978-0-89603-281-1

  • Online ISBN: 978-1-59259-507-5

  • eBook Packages: Springer Protocols

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