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Rapid Identification of Unknown Heteroplasmic Mitochondrial DNA Mutations with Mismatch-Specific Surveyor Nuclease

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Mitochondrial DNA

Part of the book series: Methods in Molecular Biology™ ((MIMB,volume 554))

Abstract

Identification of mitochondrial DNA (mtDNA) mutations is essential for diagnosis and genetic counseling of mitochondrial diseases. In this chapter, we describe a strategy for the rapid identification of heteroplasmic mtDNA mutations that can be used routinely in molecular genetic laboratories. This protocol involves the following three steps: (i) PCR amplification of the entire human mitochondrial genome with 17 overlapping PCR products, (ii) localization of mtDNA mismatch(es) after digestion of the 17 amplicons by Surveyor Nuclease, a member of a family of plant DNA endonucleases that cleave double-strand DNA at any mismatch site, and (iii) identification of the mutation by sequencing the region containing the mismatch.

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Bannwarth, S., Procaccio, V., Paquis-Flucklinger, V. (2009). Rapid Identification of Unknown Heteroplasmic Mitochondrial DNA Mutations with Mismatch-Specific Surveyor Nuclease. In: Stuart, J.A. (eds) Mitochondrial DNA. Methods in Molecular Biology™, vol 554. Humana Press. https://doi.org/10.1007/978-1-59745-521-3_19

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  • DOI: https://doi.org/10.1007/978-1-59745-521-3_19

  • Publisher Name: Humana Press

  • Print ISBN: 978-1-934115-60-2

  • Online ISBN: 978-1-59745-521-3

  • eBook Packages: Springer Protocols

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