Skip to main content

Normalized Screening of Protein Engineering Libraries by Split-GFP Crude Cell Extract Quantification

  • Protocol
  • First Online:
Protein Engineering

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1685))

Abstract

The different expression level and solubility showed by each protein variant represents an important challenge during screening campaigns: Usually, the total activity measurement constitutes the only criterion for identifying improved variants. This hampers the chances of finding interesting mutants, especially if the aim is to improve activity: On the one hand, interesting but poorly soluble variants will remain undetectable. On the other hand, a mutation might not increase activity, but improve expression level or solubility. The split-GFP technology offers an affordable and technically simple manner for overcoming that constraints, making protein library screening more efficient through the normalization of the detected enzymatic activities in relation to the quantified protein contents responsible for them.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Institutional subscriptions

References

  1. Taverna DM, Goldstein RA (2002) Why are proteins marginally stable. Proteins 46:105–109

    Article  CAS  PubMed  Google Scholar 

  2. Romero PA, Arnold FH (2009) Exploring protein landscapes by directed evolution. Nat Rev Moll Cell Biol 10:866–876

    Article  CAS  Google Scholar 

  3. Waldo GS (2003) Genetic screens and directed evolution for protein solubility. Curr Opin Chem Biol 7:33–38

    Article  CAS  PubMed  Google Scholar 

  4. Cabantous S, Terwilliger TC, Waldo GS (2005) Protein tagging and detection with engineered self-assembling fragments of green fluorescent protein. Nat Biotechnol 23:102–107

    Article  CAS  PubMed  Google Scholar 

  5. Cabantous S, Waldo GS (2006) In vivo and in vitro protein solubility assays using split GFP. Nat Methods 3:845–854

    Article  CAS  PubMed  Google Scholar 

  6. Santos-Aberturas J, Dörr M, Waldo GS et al (2015) In-depth high-throughput screening of protein engineering libraries by split-GFP direct crude cell extract data normalization. Chem Biol 22:1406–1414

    Article  CAS  PubMed  Google Scholar 

  7. Gillam EMJ, Copp JN, Ackerley DF (eds) (2014) Directed evolution library creation: methods and protocols, 2nd edn. New York, Humana Press

    Google Scholar 

  8. Ruff AJ, Dennig A, Schwaneberg U (2013) To get what we aim for–progress in diversity generation methods. FEBS J 280:2961–2978

    Article  CAS  PubMed  Google Scholar 

  9. Green R, Rogers EJ (2013) Chemical transformation of E. coli. Methods Enzymol 529:329–336

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  10. Hyun SI, Maruri-Avidal L, Moss B (2015) Topology of endoplasmic reticulum-associated cellular and viral proteins determined with split-GFP. Traffic 16:787–795

    Article  CAS  PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Uwe T. Bornscheuer .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2018 Springer Science+Business Media LLC

About this protocol

Check for updates. Verify currency and authenticity via CrossMark

Cite this protocol

Santos-Aberturas, J., Dörr, M., Bornscheuer, U.T. (2018). Normalized Screening of Protein Engineering Libraries by Split-GFP Crude Cell Extract Quantification. In: Bornscheuer, U., Höhne, M. (eds) Protein Engineering. Methods in Molecular Biology, vol 1685. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-7366-8_9

Download citation

  • DOI: https://doi.org/10.1007/978-1-4939-7366-8_9

  • Published:

  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-7364-4

  • Online ISBN: 978-1-4939-7366-8

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics