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Phosphatases in Plants

  • Protocol
Plant Phosphoproteomics

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1306))

Abstract

Reversible protein phosphorylation is an essential posttranslational modification mechanism executed by opposing actions of protein phosphatases and protein kinases. About 1,000 predicted kinases in Arabidopsis thaliana kinome predominate the number of protein phosphatases, of which there are only ~150 members in Arabidopsis. Protein phosphatases were often referred to as “housekeeping” enzymes, which act to keep eukaryotic systems in balance by counteracting the activity of protein kinases. However, recent investigations reveal the crucial and specific regulatory functions of phosphatases in cell signaling. Phosphatases operate in a coordinated manner with the protein kinases, to execute their important function in determining the cellular response to a physiological stimulus. Closer examination has established high specificity of phosphatases in substrate recognition and important roles in plant signaling pathways, such as pathogen defense and stress regulation, light and hormonal signaling, cell cycle and differentiation, metabolism, and plant growth. In this minireview we provide a compact overview about Arabidopsis protein phosphatase families, as well as members of phosphoglucan and lipid phosphatases, and highlight the recent discoveries in phosphatase research.

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References

  1. Olsen JV, Blagoev B, Gnad F, Macek B, Kumar C, Mortensen P, Mann M (2006) Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. Cell 127:635–648

    CAS  PubMed  Google Scholar 

  2. Sugiyama N, Nakagami H, Mochida K, Daudi A, Tomita M, Shirasu K, Ishihama Y (2008) Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis. Mol Syst Biol 4:193

    PubMed Central  PubMed  Google Scholar 

  3. Kerk D, Templeton G, Moorhead GB (2008) Evolutionary radiation pattern of novel protein phosphatases revealed by analysis of protein data from the completely sequenced genomes of humans, green algae, and higher plants. Plant Physiol 146:351–367

    PubMed Central  CAS  PubMed  Google Scholar 

  4. Brautigan DL (2013) Protein Ser/Thr phosphatases – the ugly ducklings of cell signalling. FEBS J 280:324–345

    CAS  PubMed  Google Scholar 

  5. Bartels S, Gonzalez Besteiro MA, Lang D, Ulm R (2010) Emerging functions for plant MAP kinase phosphatases. Trends Plant Sci 15:322–329

    CAS  PubMed  Google Scholar 

  6. Caunt CJ, Keyse SM (2013) Dual-specificity MAP kinase phosphatases (MKPs). FEBS J 280:489–504

    PubMed Central  CAS  PubMed  Google Scholar 

  7. Bartels S, Anderson JC, Gonzalez Besteiro MA, Carreri A, Hirt H, Buchala A, Metraux JP, Peck SC, Ulm R (2009) MAP kinase phosphatase1 and protein tyrosine phosphatase1 are repressors of salicylic acid synthesis and SNC1-mediated responses in Arabidopsis. Plant Cell 21:2884–2897

    PubMed Central  CAS  PubMed  Google Scholar 

  8. Lee JS, Ellis BE (2007) Arabidopsis MAPK phosphatase 2 (MKP2) positively regulates oxidative stress tolerance and inactivates the MPK3 and MPK6 MAPKs. J Biol Chem 282:25020–25029

    CAS  PubMed  Google Scholar 

  9. Lee JS, Wang S, Sritubtim S, Chen JG, Ellis BE (2009) Arabidopsis mitogen-activated protein kinase MPK12 interacts with the MAPK phosphatase IBR5 and regulates auxin signaling. Plant J 57:975–985

    CAS  PubMed  Google Scholar 

  10. Lumbreras V, Vilela B, Irar S, Sole M, Capellades M, Valls M, Coca M, Pages M (2010) MAPK phosphatase MKP2 mediates disease responses in Arabidopsis and functionally interacts with MPK3 and MPK6. Plant J 63:1017–1030

    CAS  PubMed  Google Scholar 

  11. Walia A, Lee JS, Wasteneys G, Ellis B (2009) Arabidopsis mitogen-activated protein kinase MPK18 mediates cortical microtubule functions in plant cells. Plant J 59:565–575

    CAS  PubMed  Google Scholar 

  12. Ulm R, Ichimura K, Mizoguchi T, Peck SC, Zhu T, Wang X, Shinozaki K, Paszkowski J (2002) Distinct regulation of salinity and genotoxic stress responses by Arabidopsis MAP kinase phosphatase 1. EMBO J 21:6483–6493

    PubMed Central  CAS  PubMed  Google Scholar 

  13. Ulm R, Revenkova E, di Sansebastiano GP, Bechtold N, Paszkowski J (2001) Mitogen-activated protein kinase phosphatase is required for genotoxic stress relief in Arabidopsis. Genes Dev 15:699–709

    PubMed Central  CAS  PubMed  Google Scholar 

  14. Anderson JC, Bartels S, Besteiro MA, Shahollari B, Ulm R, Peck SC (2011) Arabidopsis MAP Kinase Phosphatase 1 (AtMKP1) negatively regulates MPK6-mediated PAMP responses and resistance against bacteria. Plant J 67:258

    CAS  PubMed  Google Scholar 

  15. Li Y, Yang S, Yang H, Hua J (2007) The TIR-NB-LRR gene SNC1 is regulated at the transcript level by multiple factors. Mol Plant Microbe Interact 20:1449–1456

    CAS  PubMed  Google Scholar 

  16. Gonzalez Besteiro MA, Bartels S, Albert A, Ulm R (2011) Arabidopsis MAP kinase phosphatase 1 and its target MAP kinases 3 and 6 antagonistically determine UV-B stress tolerance, independent of the UVR8 photoreceptor pathway. Plant J 68:727–737

    PubMed  Google Scholar 

  17. Gonzalez Besteiro MA, Ulm R (2013) Phosphorylation and stabilization of Arabidopsis MAP kinase phosphatase 1 in response to UV-B stress. J Biol Chem 288:480–486

    PubMed Central  CAS  PubMed  Google Scholar 

  18. Park HC, Song EH, Nguyen XC, Lee K, Kim KE, Kim HS, Lee SM, Kim SH, Bae DW, Yun DJ, Chung WS (2011) Arabidopsis MAP kinase phosphatase 1 is phosphorylated and activated by its substrate AtMPK6. Plant Cell Rep 30:1523–1531

    CAS  PubMed  Google Scholar 

  19. Yoo JH, Cheong MS, Park CY, Moon BC, Kim MC, Kang YH, Park HC, Choi MS, Lee JH, Jung WY, Yoon HW, Chung WS, Lim CO, Lee SY, Cho MJ (2004) Regulation of the dual specificity protein phosphatase, DsPTP1, through interactions with calmodulin. J Biol Chem 279:848–858

    CAS  PubMed  Google Scholar 

  20. Gupta R, Huang Y, Kieber J, Luan S (1998) Identification of a dual-specificity protein phosphatase that inactivates a MAP kinase from Arabidopsis. Plant J 16:581–589

    CAS  PubMed  Google Scholar 

  21. Monroe-Augustus M, Zolman BK, Bartel B (2003) IBR5, a dual-specificity phosphatase-like protein modulating auxin and abscisic acid responsiveness in Arabidopsis. Plant Cell 15:2979–2991

    PubMed Central  CAS  PubMed  Google Scholar 

  22. Strader LC, Monroe-Augustus M, Bartel B (2008) The IBR5 phosphatase promotes Arabidopsis auxin responses through a novel mechanism distinct from TIR1-mediated repressor degradation. BMC Plant Biol 8:41

    PubMed Central  PubMed  Google Scholar 

  23. Strader LC, Bartel B (2009) The Arabidopsis PLEIOTROPIC DRUG RESISTANCE8/ABCG36 ATP binding cassette transporter modulates sensitivity to the auxin precursor indole-3-butyric acid. Plant Cell 21:1992–2007

    PubMed Central  CAS  PubMed  Google Scholar 

  24. Naoi K, Hashimoto T (2004) A semidominant mutation in an Arabidopsis mitogen-activated protein kinase phosphatase-like gene compromises cortical microtubule organization. Plant Cell 16:1841–1853

    PubMed Central  CAS  PubMed  Google Scholar 

  25. Fuchs S, Grill E, Meskiene I, Schweighofer A (2013) Type 2C protein phosphatases in plants. FEBS J 280:681–693

    CAS  PubMed  Google Scholar 

  26. Pytela J, Kato T, Hashimoto T (2010) Mitogen-activated protein kinase phosphatase PHS1 is retained in the cytoplasm by nuclear extrusion signal-dependent and independent mechanisms. Planta 231:1311–1322

    CAS  PubMed  Google Scholar 

  27. Quettier AL, Bertrand C, Habricot Y, Miginiac E, Agnes C, Jeannette E, Maldiney R (2006) The phs1-3 mutation in a putative dual-specificity protein tyrosine phosphatase gene provokes hypersensitive responses to abscisic acid in Arabidopsis thaliana. Plant J 47:711–719

    CAS  PubMed  Google Scholar 

  28. Fujita S, Pytela J, Hotta T, Kato T, Hamada T, Akamatsu R, Ishida Y, Kutsuna N, Hasezawa S, Nomura Y, Nakagami H, Hashimoto T (2013) An atypical tubulin kinase mediates stress-induced microtubule depolymerization in Arabidopsis. Curr Biol 23:1969–1978

    CAS  PubMed  Google Scholar 

  29. Ban Y, Kobayashi Y, Hara T, Hamada T, Hashimoto T, Takeda S, Hattori T (2013) alpha-tubulin is rapidly phosphorylated in response to hyperosmotic stress in rice and Arabidopsis. Plant Cell Physiol 54:848–858

    CAS  PubMed  Google Scholar 

  30. Silver DM, Kotting O, Moorhead GB (2014) Phosphoglucan phosphatase function sheds light on starch degradation. Trends Plant Sci 19:471

    CAS  PubMed  Google Scholar 

  31. Comparot-Moss S, Kotting O, Stettler M, Edner C, Graf A, Weise SE, Streb S, Lue WL, MacLean D, Mahlow S, Ritte G, Steup M, Chen J, Zeeman SC, Smith AM (2010) A putative phosphatase, LSF1, is required for normal starch turnover in Arabidopsis leaves. Plant Physiol 152:685–697

    PubMed Central  CAS  PubMed  Google Scholar 

  32. Kerk D, Conley TR, Rodriguez FA, Tran HT, Nimick M, Muench DG, Moorhead GB (2006) A chloroplast-localized dual-specificity protein phosphatase in Arabidopsis contains a phylogenetically dispersed and ancient carbohydrate-binding domain, which binds the polysaccharide starch. Plant J 46:400–413

    CAS  PubMed  Google Scholar 

  33. Niittyla T, Comparot-Moss S, Lue WL, Messerli G, Trevisan M, Seymour MD, Gatehouse JA, Villadsen D, Smith SM, Chen J, Zeeman SC, Smith AM (2006) Similar protein phosphatases control starch metabolism in plants and glycogen metabolism in mammals. J Biol Chem 281:11815–11818

    PubMed  Google Scholar 

  34. Sokolov LN, Dominguez-Solis JR, Allary AL, Buchanan BB, Luan S (2006) A redox-regulated chloroplast protein phosphatase binds to starch diurnally and functions in its accumulation. Proc Natl Acad Sci U S A 103:9732–9737

    PubMed Central  CAS  PubMed  Google Scholar 

  35. Hejazi M, Fettke J, Kotting O, Zeeman SC, Steup M (2010) The Laforin-like dual-specificity phosphatase SEX4 from Arabidopsis hydrolyzes both C6- and C3-phosphate esters introduced by starch-related dikinases and thereby affects phase transition of alpha-glucans. Plant Physiol 152:711–722

    PubMed Central  CAS  PubMed  Google Scholar 

  36. Silver DM, Silva LP, Issakidis-Bourguet E, Glaring MA, Schriemer DC, Moorhead GB (2013) Insight into the redox regulation of the phosphoglucan phosphatase SEX4 involved in starch degradation. FEBS J 280:538–548

    CAS  PubMed  Google Scholar 

  37. Santelia D, Kotting O, Seung D, Schubert M, Thalmann M, Bischof S, Meekins DA, Lutz A, Patron N, Gentry MS, Allain FH, Zeeman SC (2011) The phosphoglucan phosphatase like sex Four2 dephosphorylates starch at the C3-position in Arabidopsis. Plant Cell 23:4096–4111

    PubMed Central  CAS  PubMed  Google Scholar 

  38. Zeeman SC, Umemoto T, Lue WL, Au-Yeung P, Martin C, Smith AM, Chen J (1998) A mutant of Arabidopsis lacking a chloroplastic isoamylase accumulates both starch and phytoglycogen. Plant Cell 10:1699–1712

    PubMed Central  CAS  PubMed  Google Scholar 

  39. Hopkins BD, Hodakoski C, Barrows D, Mense SM, Parsons RE (2014) PTEN function: the long and the short of it. Trends Biochem Sci 39:183–190

    PubMed Central  CAS  PubMed  Google Scholar 

  40. Tonks NK (2013) Protein tyrosine phosphatases – from housekeeping enzymes to master regulators of signal transduction. FEBS J 280:346–378

    PubMed Central  CAS  PubMed  Google Scholar 

  41. Gupta R, Ting JT, Sokolov LN, Johnson SA, Luan S (2002) A tumor suppressor homolog, AtPTEN1, is essential for pollen development in Arabidopsis. Plant Cell 14:2495–2507

    PubMed Central  CAS  PubMed  Google Scholar 

  42. Pribat A, Sormani R, Rousseau-Gueutin M, Julkowska MM, Testerink C, Joubes J, Castroviejo M, Laguerre M, Meyer C, Germain V, Rothan C (2012) A novel class of PTEN protein in Arabidopsis displays unusual phosphoinositide phosphatase activity and efficiently binds phosphatidic acid. Biochem J 441:161–171

    CAS  PubMed  Google Scholar 

  43. Ding Y, Ndamukong I, Zhao Y, Xia Y, Riethoven JJ, Jones DR, Divecha N, Avramova Z (2012) Divergent functions of the myotubularin (MTM) homologs AtMTM1 and AtMTM2 in Arabidopsis thaliana: evolution of the plant MTM family. Plant J 70:866–878

    CAS  PubMed  Google Scholar 

  44. Huang Y, Li H, Gupta R, Morris PC, Luan S, Kieber JJ (2000) ATMPK4, an Arabidopsis homolog of mitogen-activated protein kinase, is activated in vitro by AtMEK1 through threonine phosphorylation. Plant Physiol 122:1301–1310

    PubMed Central  CAS  PubMed  Google Scholar 

  45. Gupta R, Luan S (2003) Redox control of protein tyrosine phosphatases and mitogen-activated protein kinases in plants. Plant Physiol 132:1149–1152

    PubMed Central  CAS  PubMed  Google Scholar 

  46. Fordham-Skelton AP, Skipsey M, Eveans IM, Edwards R, Gatehouse JA (1999) Higher plant tyrosine-specific protein phosphatases (PTPs) contain novel amino-terminal domains: expression during embryogenesis. Plant Mol Biol 39:593–605

    CAS  PubMed  Google Scholar 

  47. Xu Q, Fu HH, Gupta R, Luan S (1998) Molecular characterization of a tyrosine-specific protein phosphatase encoded by a stress-responsive gene in Arabidopsis. Plant Cell 10:849–857

    PubMed Central  CAS  PubMed  Google Scholar 

  48. Farkas I, Dombradi V, Miskei M, Szabados L, Koncz C (2007) Arabidopsis PPP family of serine/threonine phosphatases. Trends Plant Sci 12:169–176

    CAS  PubMed  Google Scholar 

  49. Uhrig RG, Labandera AM, Moorhead GB (2013) Arabidopsis PPP family of serine/threonine protein phosphatases: many targets but few engines. Trends Plant Sci 18:505–513

    CAS  PubMed  Google Scholar 

  50. Templeton GW, Nimick M, Morrice N, Campbell D, Goudreault M, Gingras AC, Takemiya A, Shimazaki K, Moorhead GB (2011) Identification and characterization of AtI-2, an Arabidopsis homologue of an ancient protein phosphatase 1 (PP1) regulatory subunit. Biochem J 435:73–83

    CAS  PubMed  Google Scholar 

  51. Takemiya A, Ariyoshi C, Shimazaki K (2009) Identification and functional characterization of inhibitor-3, a regulatory subunit of protein phosphatase 1 in plants. Plant Physiol 150:144–156

    PubMed Central  CAS  PubMed  Google Scholar 

  52. Takemiya A, Yamauchi S, Yano T, Ariyoshi C, Shimazaki K (2013) Identification of a regulatory subunit of protein phosphatase 1 which mediates blue light signaling for stomatal opening. Plant Cell Physiol 54:24–35

    CAS  PubMed  Google Scholar 

  53. DeLong A (2006) Switching the flip: protein phosphatase roles in signaling pathways. Curr Opin Plant Biol 9:470–477

    CAS  PubMed  Google Scholar 

  54. Moorhead GB, Trinkle-Mulcahy L, Ulke-Lemee A (2007) Emerging roles of nuclear protein phosphatases. Nat Rev Mol Cell Biol 8:234–244

    CAS  PubMed  Google Scholar 

  55. Moorhead GB, De Wever V, Templeton G, Kerk D (2009) Evolution of protein phosphatases in plants and animals. Biochem J 417:401–409

    CAS  PubMed  Google Scholar 

  56. Ballesteros I, Dominguez T, Sauer M, Paredes P, Duprat A, Rojo E, Sanmartin M, Sanchez-Serrano JJ (2013) Specialized functions of the PP2A subfamily II catalytic subunits PP2A-C3 and PP2A-C4 in the distribution of auxin fluxes and development in Arabidopsis. Plant J 73:862–872

    CAS  PubMed  Google Scholar 

  57. Jonassen EM, Heidari B, Nemie-Feyissa D, Matre P, Lillo C (2011) Protein phosphatase 2A regulatory subunits are starting to reveal their functions in plant metabolism and development. Plant Signal Behav 6:1216–1218

    PubMed Central  CAS  PubMed  Google Scholar 

  58. Garbers C, DeLong A, Deruere J, Bernasconi P, Soll D (1996) A mutation in protein phosphatase 2A regulatory subunit A affects auxin transport in Arabidopsis. EMBO J 15:2115–2124

    PubMed Central  CAS  PubMed  Google Scholar 

  59. Michniewicz M, Zago MK, Abas L, Weijers D, Schweighofer A, Meskiene I, Heisler MG, Ohno C, Zhang J, Huang F, Schwab R, Weigel D, Meyerowitz EM, Luschnig C, Offringa R, Friml J (2007) Antagonistic regulation of PIN phosphorylation by PP2A and PINOID directs auxin flux. Cell 130:1044–1056

    CAS  PubMed  Google Scholar 

  60. Zhou HW, Nussbaumer C, Chao Y, DeLong A (2004) Disparate roles for the regulatory A subunit isoforms in Arabidopsis protein phosphatase 2A. Plant Cell 16:709–722

    PubMed Central  CAS  PubMed  Google Scholar 

  61. Pernas M, Garcia-Casado G, Rojo E, Solano R, Sanchez-Serrano JJ (2007) A protein phosphatase 2A catalytic subunit is a negative regulator of abscisic acid signalling. Plant J 51:763–778

    CAS  PubMed  Google Scholar 

  62. Tang W, Yuan M, Wang R, Yang Y, Wang C, Oses-Prieto JA, Kim TW, Zhou HW, Deng Z, Gampala SS, Gendron JM, Jonassen EM, Lillo C, DeLong A, Burlingame AL, Sun Y, Wang ZY (2011) PP2A activates brassinosteroid-responsive gene expression and plant growth by dephosphorylating BZR1. Nat Cell Biol 13:124–131

    PubMed Central  CAS  PubMed  Google Scholar 

  63. He X, Anderson JC, del Pozo O, Gu YQ, Tang X, Martin GB (2004) Silencing of subfamily I of protein phosphatase 2A catalytic subunits results in activation of plant defense responses and localized cell death. Plant J 38:563–577

    CAS  PubMed  Google Scholar 

  64. Kwak JM, Moon JH, Murata Y, Kuchitsu K, Leonhardt N, DeLong A, Schroeder JI (2002) Disruption of a guard cell-expressed protein phosphatase 2A regulatory subunit, RCN1, confers abscisic acid insensitivity in Arabidopsis. Plant Cell 14:2849–2861

    PubMed Central  CAS  PubMed  Google Scholar 

  65. Trotta A, Wrzaczek M, Scharte J, Tikkanen M, Konert G, Rahikainen M, Holmstrom M, Hiltunen HM, Rips S, Sipari N, Mulo P, Weis E, von Schaewen A, Aro EM, Kangasjarvi S (2011) Regulatory subunit B'gamma of protein phosphatase 2A prevents unnecessary defense reactions under low light in Arabidopsis. Plant Physiol 156:1464–1480

    PubMed Central  CAS  PubMed  Google Scholar 

  66. Heidari B, Matre P, Nemie-Feyissa D, Meyer C, Rognli OA, Moller SG, Lillo C (2011) Protein phosphatase 2A B55 and A regulatory subunits interact with nitrate reductase and are essential for nitrate reductase activation. Plant Physiol 156:165–172

    PubMed Central  CAS  PubMed  Google Scholar 

  67. Leivar P, Antolin-Llovera M, Ferrero S, Closa M, Arro M, Ferrer A, Boronat A, Campos N (2011) Multilevel control of Arabidopsis 3-hydroxy-3-methylglutaryl coenzyme A reductase by protein phosphatase 2A. Plant Cell 23:1494–1511

    PubMed Central  CAS  PubMed  Google Scholar 

  68. Skottke KR, Yoon GM, Kieber JJ, DeLong A (2011) Protein phosphatase 2A controls ethylene biosynthesis by differentially regulating the turnover of ACC synthase isoforms. PLoS Genet 7:e1001370

    PubMed Central  CAS  PubMed  Google Scholar 

  69. Larsen PB, Cancel JD (2003) Enhanced ethylene responsiveness in the Arabidopsis eer1 mutant results from a loss-of-function mutation in the protein phosphatase 2A A regulatory subunit, RCN1. Plant J 34:709–718

    CAS  PubMed  Google Scholar 

  70. Tseng TS, Briggs WR (2010) The Arabidopsis rcn1-1 mutation impairs dephosphorylation of Phot2, resulting in enhanced blue light responses. Plant Cell 22:392–402

    PubMed Central  CAS  PubMed  Google Scholar 

  71. Tran HT, Nimick M, Uhrig RG, Templeton G, Morrice N, Gourlay R, DeLong A, Moorhead GB (2012) Arabidopsis thaliana histone deacetylase 14 (HDA14) is an alpha-tubulin deacetylase that associates with PP2A and enriches in the microtubule fraction with the putative histone acetyltransferase ELP3. Plant J 71:263–272

    CAS  PubMed  Google Scholar 

  72. Ahn CS, Han JA, Lee HS, Lee S, Pai HS (2011) The PP2A regulatory subunit Tap46, a component of the TOR signaling pathway, modulates growth and metabolism in plants. Plant Cell 23:185–209

    PubMed Central  CAS  PubMed  Google Scholar 

  73. Di Rubbo S, Irani NG, Russinova E (2011) PP2A phosphatases: the “on-off” regulatory switches of brassinosteroid signaling. Sci Signal 4:pe25

    PubMed  Google Scholar 

  74. Wu G, Wang X, Li X, Kamiya Y, Otegui MS, Chory J (2011) Methylation of a phosphatase specifies dephosphorylation and degradation of activated brassinosteroid receptors. Sci Signal 4:ra29

    PubMed  Google Scholar 

  75. Pujol G, Baskin TI, Casamayor A, Cortadellas N, Ferrer A, Arino J (2000) The Arabidopsis thaliana PPX/PP4 phosphatases: molecular cloning and structural organization of the genes and immunolocalization of the proteins to plastids. Plant Mol Biol 44:499–511

    CAS  PubMed  Google Scholar 

  76. Kim DH, Kang JG, Yang SS, Chung KS, Song PS, Park CM (2002) A phytochrome-associated protein phosphatase 2A modulates light signals in flowering time control in Arabidopsis. Plant Cell 14:3043–3056

    PubMed Central  CAS  PubMed  Google Scholar 

  77. Dai M, Xue Q, McCray T, Margavage K, Chen F, Lee JH, Nezames CD, Guo L, Terzaghi W, Wan J, Deng XW, Wang H (2013) The PP6 phosphatase regulates ABI5 phosphorylation and abscisic acid signaling in Arabidopsis. Plant Cell 25:517–534

    PubMed Central  CAS  PubMed  Google Scholar 

  78. Dai M, Zhang C, Kania U, Chen F, Xue Q, McCray T, Li G, Qin G, Wakeley M, Terzaghi W, Wan J, Zhao Y, Xu J, Friml J, Deng XW, Wang H (2012) A PP6-type phosphatase holoenzyme directly regulates PIN phosphorylation and auxin efflux in Arabidopsis. Plant Cell 24:2497–2514

    PubMed Central  CAS  PubMed  Google Scholar 

  79. de laFuente van Bentem S, Vossen JH, Vermeer JE, de Vroomen MJ, Gadella TW Jr, Haring MA, Cornelissen BJ (2003) The subcellular localization of plant protein phosphatase 5 isoforms is determined by alternative splicing. Plant Physiol 133:702–712

    CAS  Google Scholar 

  80. Ryu JS, Kim JI, Kunkel T, Kim BC, Cho DS, Hong SH, Kim SH, Fernandez AP, Kim Y, Alonso JM, Ecker JR, Nagy F, Lim PO, Song PS, Schafer E, Nam HG (2005) Phytochrome-specific type 5 phosphatase controls light signal flux by enhancing phytochrome stability and affinity for a signal transducer. Cell 120:395–406

    CAS  PubMed  Google Scholar 

  81. Park JH, Kim WY, Chae HB, Kim MG, Lee SY (2012) Serine/threonine protein phosphatase 5 (PP5) interacts with substrate under heat stress conditions and forms protein complex in Arabidopsis. Plant Signal Behav 7:535–538

    PubMed Central  CAS  PubMed  Google Scholar 

  82. Park JH, Lee SY, Kim WY, Jung YJ, Chae HB, Jung HS, Kang CH, Shin MR, Kim SY, Su’udi M, Yun DJ, Lee KO, Kim MG, Lee SY (2011) Heat-induced chaperone activity of serine/threonine protein phosphatase 5 enhances thermotolerance in Arabidopsis thaliana. New Phytol 191:692–705

    CAS  PubMed  Google Scholar 

  83. de la Fuente van Bentem S, Vossen JH, de Vries KJ, van Wees S, Tameling WI, Dekker HL, de Koster CG, Haring MA, Takken FL, Cornelissen BJ (2005) Heat shock protein 90 and its co-chaperone protein phosphatase 5 interact with distinct regions of the tomato I-2 disease resistance protein. Plant J 43:284–298

    CAS  PubMed  Google Scholar 

  84. Iki T, Yoshikawa M, Meshi T, Ishikawa M (2012) Cyclophilin 40 facilitates HSP90-mediated RISC assembly in plants. EMBO J 31:267–278

    PubMed Central  CAS  PubMed  Google Scholar 

  85. Barajas-Lopez JD, Kremnev D, Shaikhali J, Pinas-Fernandez A, Strand A (2013) PAPP5 is involved in the tetrapyrrole mediated plastid signalling during chloroplast development. PLoS One 8:e60305

    PubMed Central  CAS  Google Scholar 

  86. Andreeva AV, Kutuzov MA (2009) PPEF/PP7 protein Ser/Thr phosphatases. Cell Mol Life Sci 66:3103–3110

    CAS  PubMed  Google Scholar 

  87. Andreeva AV, Kutuzov MA (2001) Nuclear localization of the plant protein Ser/Thr phosphatase PP7. Mol Cell Biol Res Commun 4:345–352

    CAS  PubMed  Google Scholar 

  88. Kutuzov MA, Bennett N, Andreeva AV (2001) Interaction of plant protein Ser/Thr phosphatase PP7 with calmodulin. Biochem Biophys Res Commun 289:634–640

    CAS  PubMed  Google Scholar 

  89. Liu HT, Li GL, Chang H, Sun DY, Zhou RG, Li B (2007) Calmodulin-binding protein phosphatase PP7 is involved in thermotolerance in Arabidopsis. Plant Cell Environ 30:156–164

    CAS  PubMed  Google Scholar 

  90. Genoud T, Santa Cruz MT, Kulisic T, Sparla F, Fankhauser C, Metraux JP (2008) The protein phosphatase 7 regulates phytochrome signaling in Arabidopsis. PLoS One 3:e2699

    PubMed Central  PubMed  Google Scholar 

  91. Moller SG, Kim YS, Kunkel T, Chua NH (2003) PP7 is a positive regulator of blue light signaling in Arabidopsis. Plant Cell 15:1111–1119

    PubMed Central  CAS  PubMed  Google Scholar 

  92. Sun X, Kang X, Ni M (2012) Hypersensitive to red and blue 1 and its modification by protein phosphatase 7 are implicated in the control of Arabidopsis stomatal aperture. PLoS Genet 8:e1002674

    PubMed Central  CAS  PubMed  Google Scholar 

  93. Kutuzov MA, Andreeva AV (2002) Protein Ser/Thr phosphatases with kelch-like repeat domains. Cell Signal 14:745–750

    CAS  PubMed  Google Scholar 

  94. Guttery DS, Poulin B, Ferguson DJ, Szoor B, Wickstead B, Carroll PL, Ramakrishnan C, Brady D, Patzewitz EM, Straschil U, Solyakov L, Green JL, Sinden RE, Tobin AB, Holder AA, Tewari R (2012) A unique protein phosphatase with kelch-like domains (PPKL) in Plasmodium modulates ookinete differentiation, motility and invasion. PLoS Pathog 8:e1002948

    PubMed Central  CAS  PubMed  Google Scholar 

  95. Mora-Garcia S, Vert G, Yin Y, Cano-Delgado A, Cheong H, Chory J (2004) Nuclear protein phosphatases with Kelch-repeat domains modulate the response to brassinosteroids in Arabidopsis. Genes Dev 18:448–460

    PubMed Central  CAS  PubMed  Google Scholar 

  96. Kim TW, Guan S, Sun Y, Deng Z, Tang W, Shang JX, Sun Y, Burlingame AL, Wang ZY (2009) Brassinosteroid signal transduction from cell-surface receptor kinases to nuclear transcription factors. Nat Cell Biol 11:1254–1260

    PubMed Central  CAS  PubMed  Google Scholar 

  97. Kim TW, Guan S, Burlingame AL, Wang ZY (2011) The CDG1 kinase mediates brassinosteroid signal transduction from BRI1 receptor kinase to BSU1 phosphatase and GSK3-like kinase BIN2. Mol Cell 43:561–571

    PubMed Central  CAS  PubMed  Google Scholar 

  98. Kim TW, Michniewicz M, Bergmann DC, Wang ZY (2012) Brassinosteroid regulates stomatal development by GSK3-mediated inhibition of a MAPK pathway. Nature 482:419–422

    PubMed Central  CAS  PubMed  Google Scholar 

  99. Maselli GA, Slamovits CH, Bianchi JI, Vilarrasa-Blasi J, Cano-Delgado AI, Mora-Garcia S (2014) Revisiting the evolutionary history and roles of protein phosphatases with Kelch-like domains in plants. Plant Physiol 164:1527–1541

    PubMed Central  CAS  PubMed  Google Scholar 

  100. Andreeva AV, Kutuzov MA (2004) Widespread presence of “bacterial-like” PPP phosphatases in eukaryotes. BMC Evol Biol 4:47

    PubMed Central  PubMed  Google Scholar 

  101. Kutuzov MA, Andreeva AV (2012) Prediction of biological functions of Shewanella-like protein phosphatases (Shelphs) across different domains of life. Funct Integr Genomics 12:11–23

    CAS  PubMed  Google Scholar 

  102. Uhrig RG, Moorhead GB (2011) Two ancient bacterial-like PPP family phosphatases from Arabidopsis are highly conserved plant proteins that possess unique properties. Plant Physiol 157:1778–1792

    PubMed Central  CAS  PubMed  Google Scholar 

  103. Rodriguez PL (1998) Protein phosphatase 2C (PP2C) function in higher plants. Plant Mol Biol 38:919–927

    CAS  PubMed  Google Scholar 

  104. Schweighofer A, Hirt H, Meskiene I (2004) Plant PP2C phosphatases: emerging functions in stress signaling. Trends Plant Sci 9:236–243

    CAS  PubMed  Google Scholar 

  105. Schweighofer A, Meskiene I (2008) Protein phosphatases in plant growth signalling pathways. In: Bögre L, Beemster G (eds) Plant growth signaling, vol 10, Plant cell monographs. Springer, Berlin, pp 277–297

    Google Scholar 

  106. Xue T, Wang D, Zhang S, Ehlting J, Ni F, Jakab S, Zheng C, Zhong Y (2008) Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis. BMC Genomics 9:550

    PubMed Central  PubMed  Google Scholar 

  107. Leung J, Bouvier-Durand M, Morris PC, Guerrier D, Chefdor F, Giraudat J (1994) Arabidopsis ABA response gene ABI1: features of a calcium-modulated protein phosphatase. Science 264:1448–1452

    CAS  PubMed  Google Scholar 

  108. Meyer K, Leube MP, Grill E (1994) A protein phosphatase 2C involved in ABA signal transduction in Arabidopsis thaliana. Science 264:1452–1455

    CAS  PubMed  Google Scholar 

  109. Leung J, Merlot S, Giraudat J (1997) The Arabidopsis ABSCISIC ACID-INSENSITIVE2 (ABI2) and ABI1 genes encode homologous protein phosphatases 2C involved in abscisic acid signal transduction. Plant Cell 9:759–771

    PubMed Central  CAS  PubMed  Google Scholar 

  110. Rodriguez PL, Benning G, Grill E (1998) ABI2, a second protein phosphatase 2C involved in abscisic acid signal transduction in Arabidopsis. FEBS Lett 421:185–190

    CAS  PubMed  Google Scholar 

  111. Nishimura N, Yoshida T, Kitahata N, Asami T, Shinozaki K, Hirayama T (2007) ABA-Hypersensitive Germination1 encodes a protein phosphatase 2C, an essential component of abscisic acid signaling in Arabidopsis seed. Plant J 50:935–949

    CAS  PubMed  Google Scholar 

  112. Yoshida T, Nishimura N, Kitahata N, Kuromori T, Ito T, Asami T, Shinozaki K, Hirayama T (2006) ABA-hypersensitive germination3 encodes a protein phosphatase 2C (AtPP2CA) that strongly regulates abscisic acid signaling during germination among Arabidopsis protein phosphatase 2Cs. Plant Physiol 140:115–126

    PubMed Central  CAS  PubMed  Google Scholar 

  113. Rodriguez PL, Leube MP, Grill E (1998) Molecular cloning in Arabidopsis thaliana of a new protein phosphatase 2C (PP2C) with homology to ABI1 and ABI2. Plant Mol Biol 38:879–883

    CAS  PubMed  Google Scholar 

  114. Saez A, Apostolova N, Gonzalez-Guzman M, Gonzalez-Garcia MP, Nicolas C, Lorenzo O, Rodriguez PL (2004) Gain-of-function and loss-of-function phenotypes of the protein phosphatase 2C HAB1 reveal its role as a negative regulator of abscisic acid signalling. Plant J 37:354–369

    CAS  PubMed  Google Scholar 

  115. Fujita Y, Nakashima K, Yoshida T, Katagiri T, Kidokoro S, Kanamori N, Umezawa T, Fujita M, Maruyama K, Ishiyama K, Kobayashi M, Nakasone S, Yamada K, Ito T, Shinozaki K, Yamaguchi-Shinozaki K (2009) Three SnRK2 protein kinases are the main positive regulators of abscisic acid signaling in response to water stress in Arabidopsis. Plant Cell Physiol 50:2123–2132

    CAS  PubMed  Google Scholar 

  116. Ma Y, Szostkiewicz I, Korte A, Moes D, Yang Y, Christmann A, Grill E (2009) Regulators of PP2C phosphatase activity function as abscisic acid sensors. Science 324:1064–1068

    CAS  PubMed  Google Scholar 

  117. Park SY, Fung P, Nishimura N, Jensen DR, Fujii H, Zhao Y, Lumba S, Santiago J, Rodrigues A, Chow TF, Alfred SE, Bonetta D, Finkelstein R, Provart NJ, Desveaux D, Rodriguez PL, McCourt P, Zhu JK, Schroeder JI, Volkman BF, Cutler SR (2009) Abscisic acid inhibits type 2C protein phosphatases via the PYR/PYL family of START proteins. Science 324:1068–1071

    PubMed Central  CAS  PubMed  Google Scholar 

  118. Rubio S, Rodrigues A, Saez A, Dizon MB, Galle A, Kim TH, Santiago J, Flexas J, Schroeder JI, Rodriguez PL (2009) Triple loss of function of protein phosphatases type 2C leads to partial constitutive response to endogenous abscisic acid. Plant Physiol 150:1345–1355

    PubMed Central  CAS  PubMed  Google Scholar 

  119. Vlad F, Rubio S, Rodrigues A, Sirichandra C, Belin C, Robert N, Leung J, Rodriguez PL, Lauriere C, Merlot S (2009) Protein phosphatases 2C regulate the activation of the Snf1-related kinase OST1 by abscisic acid in Arabidopsis. Plant Cell 21:3170–3184

    PubMed Central  CAS  PubMed  Google Scholar 

  120. Yoshida R, Umezawa T, Mizoguchi T, Takahashi S, Takahashi F, Shinozaki K (2006) The regulatory domain of SRK2E/OST1/SnRK2.6 interacts with ABI1 and integrates abscisic acid (ABA) and osmotic stress signals controlling stomatal closure in Arabidopsis. J Biol Chem 281:5310–5318

    CAS  PubMed  Google Scholar 

  121. Fujii H, Zhu JK (2009) Arabidopsis mutant deficient in 3 abscisic acid-activated protein kinases reveals critical roles in growth, reproduction, and stress. Proc Natl Acad Sci U S A 106:8380–8385

    PubMed Central  CAS  PubMed  Google Scholar 

  122. Sirichandra C, Davanture M, Turk BE, Zivy M, Valot B, Leung J, Merlot S (2010) The Arabidopsis ABA-activated kinase OST1 phosphorylates the bZIP transcription factor ABF3 and creates a 14-3-3 binding site involved in its turnover. PLoS One 5:e13935

    PubMed Central  PubMed  Google Scholar 

  123. Brandt B, Brodsky DE, Xue S, Negi J, Iba K, Kangasjarvi J, Ghassemian M, Stephan AB, Hu H, Schroeder JI (2012) Reconstitution of abscisic acid activation of SLAC1 anion channel by CPK6 and OST1 kinases and branched ABI1 PP2C phosphatase action. Proc Natl Acad Sci U S A 109:10593–10598

    PubMed Central  CAS  PubMed  Google Scholar 

  124. Rodrigues A, Adamo M, Crozet P, Margalha L, Confraria A, Martinho C, Elias A, Rabissi A, Lumbreras V, Gonzalez-Guzman M, Antoni R, Rodriguez PL, Baena-Gonzalez E (2013) ABI1 and PP2CA phosphatases are negative regulators of Snf1-related protein kinase1 signaling in Arabidopsis. Plant Cell 25:3871–3884

    PubMed Central  CAS  PubMed  Google Scholar 

  125. Geiger D, Scherzer S, Mumm P, Stange A, Marten I, Bauer H, Ache P, Matschi S, Liese A, Al-Rasheid KA, Romeis T, Hedrich R (2009) Activity of guard cell anion channel SLAC1 is controlled by drought-stress signaling kinase-phosphatase pair. Proc Natl Acad Sci U S A 106:21425–21430

    PubMed Central  CAS  PubMed  Google Scholar 

  126. Lee SC, Lan W, Buchanan BB, Luan S (2009) A protein kinase-phosphatase pair interacts with an ion channel to regulate ABA signaling in plant guard cells. Proc Natl Acad Sci U S A 106:21419–21424

    PubMed Central  CAS  PubMed  Google Scholar 

  127. Geiger D, Scherzer S, Mumm P, Marten I, Ache P, Matschi S, Liese A, Wellmann C, Al-Rasheid KA, Grill E, Romeis T, Hedrich R (2010) Guard cell anion channel SLAC1 is regulated by CDPK protein kinases with distinct Ca2+ affinities. Proc Natl Acad Sci U S A 107:8023–8028

    PubMed Central  CAS  PubMed  Google Scholar 

  128. Nakashima K, Fujita Y, Kanamori N, Katagiri T, Umezawa T, Kidokoro S, Maruyama K, Yoshida T, Ishiyama K, Kobayashi M, Shinozaki K, Yamaguchi-Shinozaki K (2009) Three Arabidopsis SnRK2 protein kinases, SRK2D/SnRK2.2, SRK2E/SnRK2.6/OST1 and SRK2I/SnRK2.3, involved in ABA signaling are essential for the control of seed development and dormancy. Plant Cell Physiol 50:1345–1363

    CAS  PubMed  Google Scholar 

  129. Sato A, Sato Y, Fukao Y, Fujiwara M, Umezawa T, Shinozaki K, Hibi T, Taniguchi M, Miyake H, Goto DB, Uozumi N (2009) Threonine at position 306 of the KAT1 potassium channel is essential for channel activity and is a target site for ABA-activated SnRK2/OST1/SnRK2.6 protein kinase. Biochem J 424:439–448

    CAS  PubMed  Google Scholar 

  130. Geiger D, Maierhofer T, Al-Rasheid KA, Scherzer S, Mumm P, Liese A, Ache P, Wellmann C, Marten I, Grill E, Romeis T, Hedrich R (2011) Stomatal closure by fast abscisic acid signaling is mediated by the guard cell anion channel SLAH3 and the receptor RCAR1. Sci Signal 4:ra32

    PubMed  Google Scholar 

  131. Fuchs S, Tischer SV, Wunschel C, Christmann A, Grill E (2014) Abscisic acid sensor RCAR7/PYL13, specific regulator of protein phosphatase coreceptors. Proc Natl Acad Sci U S A 111:5741

    PubMed Central  CAS  PubMed  Google Scholar 

  132. Miyakawa T, Fujita Y, Yamaguchi-Shinozaki K, Tanokura M (2013) Structure and function of abscisic acid receptors. Trends Plant Sci 18:259–266

    CAS  PubMed  Google Scholar 

  133. Meskiene I, Baudouin E, Schweighofer A, Liwosz A, Jonak C, Rodriguez PL, Jelinek H, Hirt H (2003) Stress-induced protein phosphatase 2C is a negative regulator of a mitogen-activated protein kinase. J Biol Chem 278:18945–18952

    CAS  PubMed  Google Scholar 

  134. Meskiene I, Bogre L, Glaser W, Balog J, Brandstotter M, Zwerger K, Ammerer G, Hirt H (1998) MP2C, a plant protein phosphatase 2C, functions as a negative regulator of mitogen-activated protein kinase pathways in yeast and plants. Proc Natl Acad Sci U S A 95:1938–1943

    PubMed Central  CAS  PubMed  Google Scholar 

  135. Schweighofer A, Kazanaviciute V, Scheikl E, Teige M, Doczi R, Hirt H, Schwanninger M, Kant M, Schuurink R, Mauch F, Buchala A, Cardinale F, Meskiene I (2007) The PP2C-type phosphatase AP2C1, which negatively regulates MPK4 and MPK6, modulates innate immunity, jasmonic acid, and ethylene levels in Arabidopsis. Plant Cell 19:2213–2224

    PubMed Central  CAS  PubMed  Google Scholar 

  136. Brock AK, Willmann R, Kolb D, Grefen L, Lajunen HM, Bethke G, Lee J, Nurnberger T, Gust AA (2010) The Arabidopsis mitogen-activated protein kinase phosphatase PP2C5 affects seed germination, stomatal aperture, and abscisic acid-inducible gene expression. Plant Physiol 153:1098–1111

    PubMed Central  CAS  PubMed  Google Scholar 

  137. Umbrasaite J, Schweighofer A, Kazanaviciute V, Magyar Z, Ayatollahi Z, Unterwurzacher V, Choopayak C, Boniecka J, Murray JA, Bogre L, Meskiene I (2010) MAPK phosphatase AP2C3 induces ectopic proliferation of epidermal cells leading to stomata development in Arabidopsis. PLoS One 5:e15357

    PubMed Central  CAS  PubMed  Google Scholar 

  138. Galletti R, Ferrari S, De Lorenzo G (2011) Arabidopsis MPK3 and MPK6 Play Different Roles in Basal and Oligogalacturonide- or Flagellin-Induced Resistance against Botrytis cinerea. Plant Physiol 157:804–814

    PubMed Central  CAS  PubMed  Google Scholar 

  139. Song SK, Lee MM, Clark SE (2006) POL and PLL1 phosphatases are CLAVATA1 signaling intermediates required for Arabidopsis shoot and floral stem cells. Development 133:4691–4698

    CAS  PubMed  Google Scholar 

  140. Song SK, Hofhuis H, Lee MM, Clark SE (2008) Key divisions in the early Arabidopsis embryo require POL and PLL1 phosphatases to establish the root stem cell organizer and vascular axis. Dev Cell 15:98–109

    PubMed Central  CAS  PubMed  Google Scholar 

  141. Tovar-Mendez A, Miernyk JA, Hoyos E, Randall DD (2014) A functional genomic analysis of Arabidopsis thaliana PP2C clade D. Protoplasma 251:265–271

    CAS  PubMed  Google Scholar 

  142. Servet C, Benhamed M, Latrasse D, Kim W, Delarue M, Zhou DX (2008) Characterization of a phosphatase 2C protein as an interacting partner of the histone acetyltransferase GCN5 in Arabidopsis. Biochim Biophys Acta 1779:376–382

    CAS  PubMed  Google Scholar 

  143. Lee MW, Jelenska J, Greenberg JT (2008) Arabidopsis proteins important for modulating defense responses to Pseudomonas syringae that secrete HopW1-1. Plant J 54:452–465

    CAS  PubMed  Google Scholar 

  144. Widjaja I, Lassowskat I, Bethke G, Eschen-Lippold L, Long HH, Naumann K, Dangl JL, Scheel D, Lee J (2010) A protein phosphatase 2C, responsive to the bacterial effector AvrRpm1 but not to the AvrB effector, regulates defense responses in Arabidopsis. Plant J 61:249–258

    CAS  PubMed  Google Scholar 

  145. Castello MJ, Carrasco JL, Vera P (2010) DNA-binding protein phosphatase AtDBP1 mediates susceptibility to two potyviruses in Arabidopsis. Plant Physiol 153:1521–1525

    PubMed Central  CAS  PubMed  Google Scholar 

  146. Carrasco JL, Castello MJ, Naumann K, Lassowskat I, Navarrete-Gomez M, Scheel D, Vera P (2014) Arabidopsis protein phosphatase DBP1 nucleates a protein network with a role in regulating plant defense. PLoS One 9:e90734

    PubMed Central  PubMed  Google Scholar 

  147. Pribil M, Pesaresi P, Hertle A, Barbato R, Leister D (2010) Role of plastid protein phosphatase TAP38 in LHCII dephosphorylation and thylakoid electron flow. PLoS Biol 8:e1000288

    PubMed Central  PubMed  Google Scholar 

  148. Samol I, Shapiguzov A, Ingelsson B, Fucile G, Crevecoeur M, Vener AV, Rochaix JD, Goldschmidt-Clermont M (2012) Identification of a photosystem II phosphatase involved in light acclimation in Arabidopsis. Plant Cell 24:2596–2609

    PubMed Central  CAS  PubMed  Google Scholar 

  149. Shapiguzov A, Ingelsson B, Samol I, Andres C, Kessler F, Rochaix JD, Vener AV, Goldschmidt-Clermont M (2010) The PPH1 phosphatase is specifically involved in LHCII dephosphorylation and state transitions in Arabidopsis. Proc Natl Acad Sci U S A 107:4782–4787

    PubMed Central  CAS  PubMed  Google Scholar 

  150. Archambault J, Pan G, Dahmus GK, Cartier M, Marshall N, Zhang S, Dahmus ME, Greenblatt J (1998) FCP1, the RAP74-interacting subunit of a human protein phosphatase that dephosphorylates the carboxyl-terminal domain of RNA polymerase IIO. J Biol Chem 273:27593–27601

    CAS  PubMed  Google Scholar 

  151. Gohla A, Birkenfeld J, Bokoch GM (2005) Chronophin, a novel HAD-type serine protein phosphatase, regulates cofilin-dependent actin dynamics. Nat Cell Biol 7:21–29

    CAS  PubMed  Google Scholar 

  152. Tadjuidje E, Hegde RS (2013) The Eyes Absent proteins in development and disease. Cell Mol Life Sci 70:1897–1913

    PubMed Central  CAS  PubMed  Google Scholar 

  153. Koiwa H, Barb AW, Xiong L, Li F, McCully MG, Lee BH, Sokolchik I, Zhu J, Gong Z, Reddy M, Sharkhuu A, Manabe Y, Yokoi S, Zhu JK, Bressan RA, Hasegawa PM (2002) C-terminal domain phosphatase-like family members (AtCPLs) differentially regulate Arabidopsis thaliana abiotic stress signaling, growth, and development. Proc Natl Acad Sci U S A 99:10893–10898

    PubMed Central  CAS  PubMed  Google Scholar 

  154. Koiwa H, Hausmann S, Bang WY, Ueda A, Kondo N, Hiraguri A, Fukuhara T, Bahk JD, Yun DJ, Bressan RA, Hasegawa PM, Shuman S (2004) Arabidopsis C-terminal domain phosphatase-like 1 and 2 are essential Ser-5-specific C-terminal domain phosphatases. Proc Natl Acad Sci U S A 101:14539–14544

    PubMed Central  CAS  PubMed  Google Scholar 

  155. Matsuda O, Sakamoto H, Nakao Y, Oda K, Iba K (2009) CTD phosphatases in the attenuation of wound-induced transcription of jasmonic acid biosynthetic genes in Arabidopsis. Plant J 57:96–108

    CAS  PubMed  Google Scholar 

  156. Ueda A, Li P, Feng Y, Vikram M, Kim S, Kang CH, Kang JS, Bahk JD, Lee SY, Fukuhara T, Staswick PE, Pepper AE, Koiwa H (2008) The Arabidopsis thaliana carboxyl-terminal domain phosphatase-like 2 regulates plant growth, stress and auxin responses. Plant Mol Biol 67:683–697

    CAS  PubMed  Google Scholar 

  157. Xiong L, Lee H, Ishitani M, Tanaka Y, Stevenson B, Koiwa H, Bressan RA, Hasegawa PM, Zhu JK (2002) Repression of stress-responsive genes by FIERY2, a novel transcriptional regulator in Arabidopsis. Proc Natl Acad Sci U S A 99:10899–10904

    PubMed Central  CAS  PubMed  Google Scholar 

  158. Jin YM, Jung J, Jeon H, Won SY, Feng Y, Kang JS, Lee SY, Cheong JJ, Koiwa H, Kim M (2011) AtCPL5, a novel Ser-2-specific RNA polymerase II C-terminal domain phosphatase, positively regulates ABA and drought responses in Arabidopsis. New Phytol 190:57–74

    CAS  PubMed  Google Scholar 

  159. Jeong IS, Aksoy E, Fukudome A, Akhter S, Hiraguri A, Fukuhara T, Bahk JD, Koiwa H (2013) Arabidopsis C-terminal domain phosphatase-like 1 functions in miRNA accumulation and DNA methylation. PLoS One 8:e74739

    PubMed Central  CAS  PubMed  Google Scholar 

  160. Manavella PA, Hagmann J, Ott F, Laubinger S, Franz M, Macek B, Weigel D (2012) Fast-forward genetics identifies plant CPL phosphatases as regulators of miRNA processing factor HYL1. Cell 151:859–870

    CAS  PubMed  Google Scholar 

  161. Rayapureddi JP, Kattamuri C, Chan FH, Hegde RS (2005) Characterization of a plant, tyrosine-specific phosphatase of the aspartyl class. Biochemistry 44:751–758

    CAS  PubMed  Google Scholar 

  162. Tonks NK (2013) Special issue: protein phosphatases: from molecules to networks: introduction. FEBS J 280:323

    CAS  PubMed  Google Scholar 

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Acknowledgements

We apologize to the readers for not covering numerous important studies and to authors, whose studies could not be mentioned in this minireview due to space limitations.

This work has received funding from the Lithuanian-Swiss cooperation program to reduce economic and social disparities within the enlarged European Union under project agreement No. CH-3-ŠMM-01/10, from the Lithuanian Research Council MIP-003/2014 and from the Austrian Science Fund (FWF) I255.

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Schweighofer, A., Meskiene, I. (2015). Phosphatases in Plants. In: Schulze, W. (eds) Plant Phosphoproteomics. Methods in Molecular Biology, vol 1306. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-2648-0_2

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