Systems Engineering Approaches for Bioinformatics, Genomics, and Computational Biology

In this topical collection (10 articles)

1. Research

   Modeling and systematic analysis of biomarker validation using selected reaction monitoring

   Esmaeil Atashpaz-Gargari… Article:17

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2. Research

   Unbiased bootstrap error estimation for linear discriminant analysis

   Thang Vu, Chao Sima, Ulisses M Braga-Neto… Article:15

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3. Research

   Inference of dynamic biological networks based on responses to drug perturbations

   Noah Berlow, Lara Davis, Charles Keller… Article:14

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4. Research

   Using the minimum description length principle to reduce the rate of false positives of best-fit algorithms

   Jie Fang, Hongjia Ouyang, Liangzhong Shen… Article:13

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5. Research

   Gene regulatory network inference and validation using relative change ratio analysis and time-delayed dynamic Bayesian network

   Peng Li, Ping Gong, Haoni Li… Article:12

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6. Research

   Template-based intervention in Boolean network models of biological systems

   Michael P Verdicchio… Article:11

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7. Research

   Learning restricted Boolean network model by time-series data

   Hongjia Ouyang, Jie Fang, Liangzhong Shen… Article:10

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8. Research

   A sequential Monte Carlo framework for haplotype inference in CNV/SNP genotype data

   Alexandros Iliadis, Dimitris Anastassiou… Article:7

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9. Research

   A comparison study of optimal and suboptimal intervention policies for gene regulatory networks in the presence of uncertainty

   Mohammadmahdi R Yousefi, Edward R Dougherty Article:6

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10. Research

    Regularized EM algorithm for sparse parameter estimation in nonlinear dynamic systems with application to gene regulatory network inference

    Bin Jia, Xiaodong Wang Article:5

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