Biomedical Ontologies

In this topical collection (16 articles)

1. Research

   The flora phenotype ontology (FLOPO): tool for integrating morphological traits and phenotypes of vascular plants

   Robert Hoehndorf, Mona Alshahrani, Georgios V. Gkoutos… Article:65

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2. Research

   The Ontology of Biological and Clinical Statistics (OBCS) for standardized and reproducible statistical analysis

   Jie Zheng, Marcelline R. Harris, Anna Maria Masci… Article:53

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3. Research

   The ontology of medically related social entities: recent developments

   Amanda Hicks, Josh Hanna, Daniel Welch… Article:47

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4. Research

   COMODI: an ontology to characterise differences in versions of computational models in biology

   Martin Scharm, Dagmar Waltemath, Pedro Mendes… Article:46

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5. Database

   The Cell Ontology 2016: enhanced content, modularization, and ontology interoperability

   Alexander D. Diehl, Terrence F. Meehan… Article:44

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6. Research

   OntoStudyEdit: a new approach for ontology-based representation and management of metadata in clinical and epidemiological research

   Alexandr Uciteli, Heinrich Herre Article:41

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7. Research

   DermO; an ontology for the description of dermatologic disease

   Hannah M. Fisher, Robert Hoehndorf, Bruno S. Bazelato… Article:38

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8. Software

   owlcpp: a C++ library for working with OWL ontologies

   Mikhail K. Levin, Lindsay G. Cowell Article:35

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9. Database

   The cellular microscopy phenotype ontology

   Simon Jupp, James Malone, Tony Burdett… Article:28

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10. Research

    OmniSearch: a semantic search system based on the Ontology for MIcroRNA Target (OMIT) for microRNA-target gene interaction data

    Jingshan Huang, Fernando Gutierrez, Harrison J. Strachan… Article:25

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11. Research

    The Non-Coding RNA Ontology (NCRO): a comprehensive resource for the unification of non-coding RNA biology

    Jingshan Huang, Karen Eilbeck, Barry Smith… Article:24

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12. Research

    Disease Compass– a navigation system for disease knowledge based on ontology and linked data techniques

    Kouji Kozaki, Yuki Yamagata, Riichiro Mizoguchi… Article:22

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13. Research

    MicrO: an ontology of phenotypic and metabolic characters, assays, and culture media found in prokaryotic taxonomic descriptions

    Carrine E. Blank, Hong Cui, Lisa R. Moore… Article:18

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14. Research

    Ontological representation, classification and data-driven computing of phenotypes

    Alexandr Uciteli, Christoph Beger, Toralf Kirsten… Article:15

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15. Research

    Ontology-based specification and generation of search queries for post-market surveillance

    Alexandr Uciteli, Stefan Kropf, Timo Weiland… Article:9

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16. Research

    An ontological analysis of medical Bayesian indicators of performance

    Adrien Barton, Jean-François Ethier, Régis Duvauferrier… Article:1

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