Skip to main content
Log in

TD-DFT accuracy in determining excited-state structures and fluorescence spectra of firefly emitter

  • Published:
Chemical Research in Chinese Universities Aims and scope

Abstract

We analyzed the excited-state structures and emission spectra of firefly emitter, the anionic keto form of firefly oxyluciferin(keto-1), determined by the time dependent-density functional theory(TD-DFT) approach. The analysis is based on a direct comparison with the highly correlated CASSCF(MS-CASPT2) ab initio approach. 49 DFT functionals were considered and applied to the study. Among the tested functionals, mPW3PBE, B3PW91 and B3P86 give the best performance for ground-state geometry, absorption spectrum, excite-state geometry and emission spectrum.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. Fraga H., Photochem. Photobiol. Sci., 2008, 7, 146

    Article  CAS  Google Scholar 

  2. Roda A., Pasini P., Mirasoli, M., Michelini E., Guardigli M., Trends Biotechnol., 2004, 22, 295

    Article  CAS  Google Scholar 

  3. Branchini B. R., Murtiashaw M. H., Magyar R. A., Portier N. C., Ruggiero M. C., Stroh J. G., J. Am. Chem. Soc., 2002, 124, 2112

    Article  CAS  Google Scholar 

  4. Branchini B. R., Southworth T. L., Murtiashaw M. H., Magyar R. A., Gonzalez S. A., Ruggiero M. C., Stroh J. G., Biochemistry, 2004, 43, 7255

    Article  CAS  Google Scholar 

  5. Wood K. V., Photochem. Photobiol., 1995, 62, 662

    Article  CAS  Google Scholar 

  6. Hastings J. W., Gene, 1996, 173, 5

    Article  CAS  Google Scholar 

  7. Liu Y. J., de Vico L., Lindh R., J. Photochem. Photobiol. A, 2008, 194, 261

    Article  CAS  Google Scholar 

  8. Navizet I., Liu Y. J., Ferré N., Xiao H. Y., Fang W. H., Lindh R., J. Am. Chem. Soc., 2010, 132, 706

    Article  CAS  Google Scholar 

  9. Yang T., Goddard J. D., J. Phys. Chem. A, 2007, 111, 4489

    Article  CAS  Google Scholar 

  10. Nakatani N., Hasegawa J. Y., Nakatsuji H., Chem. Phys. Lett., 2009, 469, 191

    Article  CAS  Google Scholar 

  11. Nakatani N., Hasegawa J. Y., Nakatsuji H., J. Am. Chem. Soc., 2007, 129, 8756

    Article  CAS  Google Scholar 

  12. Li Z. W., Min C. G., Ren A. M., Guo J. F., Goddard J. D., Feng J. K., Zuo L., Bull. Korean Chem. Soc., 2010, 31, 895

    Article  Google Scholar 

  13. Li Z. W., Ren A. M., Guo J. F., Yang T., Goddard J. D., Feng J. K., J. Phys. Chem. A, 2008, 112, 9796

    Article  CAS  Google Scholar 

  14. da Silva L. P., Esteves da Silva J. C. G., J. Comput. Chem., 2011, 32, 2654

    Article  Google Scholar 

  15. Min C. G., Ren A. M., Guo J. F., Zou L. Y., Goddard J. D., Sun C. C., ChemPhysChem, 2010, 11, 2199

    Article  CAS  Google Scholar 

  16. Jin J., Xu L., Guo S. J., Sun S. Y., Zhang S., Zhu C. L., Kong W., Jiang C. L., Chem. Res. Chinese Universities, 2012, 28(1), 91

    CAS  Google Scholar 

  17. Li Z. S., Zou L. Y., Ren A. M., Feng J. K., Chem. J. Chinese Universities, 2012, 33(12), 2757

    CAS  Google Scholar 

  18. Sun Y., Ren A. M., Li Z. S., Min C. G., Ren X. F., Feng J. K., Chem. J. Chinese Universities, 2011, 32(11), 2586

    CAS  Google Scholar 

  19. Serrano-Andrés L., Merchàn M., J. Mol. Struct.(Theochem.), 2005, 729, 99

    Article  Google Scholar 

  20. Wada N., Sakai H., J. Biol. Phys., 2005, 31, 403

    Article  CAS  Google Scholar 

  21. Sundholm D., Chem. Phys. Lett., 1999, 302, 480

    Article  CAS  Google Scholar 

  22. Furche F., Ahlrichs R., Wachsmann C., Weber E., Sobanski A., Vogtle F., Grimme S., J. Am. Chem. Soc., 2000, 122, 1717

    Article  CAS  Google Scholar 

  23. Dreuw A., Dunietz B. D., Head-Gordon M., J. Am. Chem. Soc., 2002, 124, 12070

    Article  CAS  Google Scholar 

  24. Dreuw A., Fleming G. R., Head-Gordon M., J. Phys. Chem. B, 2003, 107, 6500

    Article  CAS  Google Scholar 

  25. Frisch M. J., Trucks G. W., Schlegel H. B., et al., Gaussian 09, Revision A.02, Gaussian Inc., Wallingford CT, 2009

    Google Scholar 

  26. Grimme S., J. Comp. Chem., 2006, 27, 1787

    Article  CAS  Google Scholar 

  27. Becke A. D., Phys. Rev. A, 1988, 38, 3098

    Article  CAS  Google Scholar 

  28. Perdew J. P., Burke K., Ernzerhof M., Phys. Rev. Lett., 1996, 77, 3865

    Article  CAS  Google Scholar 

  29. Perdew J. P., Eds.; Ziesche P., Eschig H., Electronic Structure of Solids’ 91, Akademie Verlag, Berlin, 1991, 11

  30. Hamprecht F. A., Cohen A., Tozer D. J., Handy N. C., J. Chem. Phys., 1998, 109, 6264

    Article  CAS  Google Scholar 

  31. Boese A. D., Doltsinis N. L., Handy N. C., Sprik M., J. Chem. Phys., 2000, 112, 1670

    Article  CAS  Google Scholar 

  32. Boese A. D., Handy N. C., J. Chem. Phys., 2001, 114, 5497

    Article  CAS  Google Scholar 

  33. Lee C., Yang W., Parr R. G., Phys. Rev. B, 1988, 37, 785

    Article  CAS  Google Scholar 

  34. Adamo C., Barone V., J. Chem. Phys., 1998, 108, 664

    Article  CAS  Google Scholar 

  35. Handy N. C., Cohen A., J. Mol. Phys., 2001, 99, 403

    Article  CAS  Google Scholar 

  36. Hoe W. M., Cohen A. J., Handy N. C., Chem. Phys. Lett., 2001, 341, 319

    Article  CAS  Google Scholar 

  37. Becke A. D., J. Chem. Phys., 1996, 104, 1040

    Article  CAS  Google Scholar 

  38. Zhao Y., Truhlar D. G., J. Chem. Phys., 2006, 125, 194101

    Article  Google Scholar 

  39. Boese A. D., Handy N. C., J. Chem. Phys., 2002, 116, 9559

    Article  CAS  Google Scholar 

  40. van Voorhis T., Scuseria G. E., J. Chem. Phys., 1998, 109, 400

    Article  Google Scholar 

  41. Perdew J. P., Phys. Rev. B, 1986, 33, 8822

    Article  Google Scholar 

  42. Schmider H. L., Becke A. D., J. Chem. Phys., 1998, 108, 9624

    Article  CAS  Google Scholar 

  43. Wilson P. J., Bradley T. J., Tozer D. J., J. Chem. Phys., 2001, 115, 9233

    Article  CAS  Google Scholar 

  44. Becke A. D., J. Chem. Phys., 1993, 98, 1372

    Article  CAS  Google Scholar 

  45. Henderson T. M., Izmaylov A. F., Scalmani G., Scuseria G. E., J. Chem. Phys., 2009, 131, 044108

    Article  Google Scholar 

  46. Becke A. D., J. Chem. Phys., 1997, 107, 8554

    Article  CAS  Google Scholar 

  47. Zhao Y., Truhlar D. G., J. Phys. Chem. A, 2004, 108, 6908

    Article  CAS  Google Scholar 

  48. Xu X., Goddard III W. A., Proc. Natl. Acad. Sci. USA, 2004, 101, 2673

    Article  CAS  Google Scholar 

  49. Zhao Y., Lynch B. J., Truhlar D. G., J. Phys. Chem. A, 2004, 108, 2715

    Article  CAS  Google Scholar 

  50. Boese A. D., Martin J. M. L., J. Chem. Phys., 2004, 121, 3405

    Article  CAS  Google Scholar 

  51. Zhao Y., Truhlar D. G., Theor. Chem. Acc., 2008, 120, 215

    Article  CAS  Google Scholar 

  52. Zhao Y., Truhlar D. G., J. Phys. Chem. A, 2006, 110, 5121

    Article  CAS  Google Scholar 

  53. Yanai T., Tew D. P., Handy N. C., Chem. Phys. Lett., 2004, 393, 51

    Article  CAS  Google Scholar 

  54. Chai J. D., Head-Gordon M., J. Chem. Phys., 2008, 128, 084106

    Article  Google Scholar 

  55. Chai J. D., Head-Gordon M., Phys. Chem. Chem. Phys., 2008, 10, 6615

    Article  CAS  Google Scholar 

  56. Ugarova N. N., J. Biolumin. Chemilumin., 1989, 4, 406

    Article  CAS  Google Scholar 

  57. Viviani V. R., Bechara E. J. H., Photochem. Photobiol., 1995, 62, 490

    Article  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding authors

Correspondence to Chun-gang Min or Ai-min Ren.

Additional information

Supported by the National Natural Science Foundation of China(Nos.21173099, 20973078, 51164017), the Applied Basic Research Plans Program of Yunnan Province, China(No.2011FZ040), the Scientific Research Fund of Yunnan Provincial Education Department, China(No.2012Y545), the Training Foundation for Talents of Kunming University of Science and Technology(No.KKSY201232040) and the Foundation of State Key Laboratory of Theoretical and Computational Chemistry, China.

Electronic supplementary material

Rights and permissions

Reprints and permissions

About this article

Cite this article

Min, Cg., Leng, Y., Yang, Xk. et al. TD-DFT accuracy in determining excited-state structures and fluorescence spectra of firefly emitter. Chem. Res. Chin. Univ. 29, 982–985 (2013). https://doi.org/10.1007/s40242-013-3050-6

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s40242-013-3050-6

Keywords

Navigation