Skip to main content
Log in

Classification of hybrid and altered Vibrio cholerae strains by CTX prophage and RS1 element structure

  • Articles
  • Published:
The Journal of Microbiology Aims and scope Submit manuscript

Abstract

Analysis of the CTX prophage and RS1 element in hybrid and altered Vibrio cholera O1 strains showed two classifiable groups. Group I strains contain a tandem repeat of classical CTX prophage on the small chromosome. Strains in this group either contain no element(s) or an additional CTX prophage or RS1 element(s) on the large chromosome. Group II strains harbor RS1 and CTX prophage, which has an E1 Tor type rstR and classical ctxB on the large chromosome.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Chun, J., C.J. Grim, N.A. Hasan, J.H. Lee, S.Y. Choi, B.J. Haley, E. Taviani, Y.S. Jeon, D.W. Kim, T.S. Brettin, D.C. Bruce, J.F. Challacombe, J.C. Detter, CS. Han, A.C. Munk, O. Chertkov, L. Meincke, E. Saunders, R.A. Walters, A. Huq, G.B. Nair, and R.R. Colwell. 2009. Comparative genomics reveals mechanism for short-term and long-term clonal transitions in pandemic Vibrio cholerae. Proc. Natl. Acad. Sci. USA 106, 15442–15447.

    Article  CAS  PubMed  Google Scholar 

  • Davis, B.M., K.E. Moyer, E.F. Boyd, and M.K. Waldor. 2000. CTX prophages in classical biotype Vibrio cholerae: functional phage genes but dysfunctional phage genomes. J. Bacteriol. 182, 6992–6998.

    Article  CAS  PubMed  Google Scholar 

  • Faruque, S.M., V.C. Tam, N. Chowdhury, P. Diraphat, M. Dziejman, J.F. Heidelberg, J.D. Clemens, J.J. Mekalanos, and G.B. Nair. 2007. Genomic analysis of the Mozambique strain of Vibrio cholerae O1 reveals the origin of E1 Tor strains carrying classical CTX prophage. Proc. Natl. Acad. Sci. USA 104, 5151–5156.

    Article  CAS  PubMed  Google Scholar 

  • Goel, A.K., M. Jain, P. Kumar, S. Bhadauria, D.V. Kmboj, and L. Singh. 2008. A new variant of Vibrio cholerae O1 E1 Tor causing cholera in India. J. Infection 57, 280–281.

    Article  Google Scholar 

  • Kaper, J.B., J.G. Morris, Jr., and M.M. Levine. 1995. Cholera. Clin. Microbiol. Rev. 8, 48–86.

    CAS  PubMed  Google Scholar 

  • Lee, J.H., K.H. Han, S.Y. Choi, M.E. Lucas, C. Mondlane, M. Ansaruzzaman, G.B. Nair, D.A. Sack, L. von Seidlein, J.D. Clemens, M. Song, J. Chun, and D.W. Kim. 2006. Multilocus sequence typing (MLST) analysis of Vibrio cholerae O1 E1 Tor isolates from Mozambique that harbour the classical CTX prophage. J. Med. Microbiol. 55, 165–170.

    Article  CAS  PubMed  Google Scholar 

  • Mahalanabis, D., A.L. Lopez, D. Sur, J. Deen, B. Manna, S. Kanungo, L. von Seidlein, R. Carbis, S.H. Han, S.H. Shin, S. Attridge, R. Rao, J. Holmgren, J. Clemens, and S.K. Bhatta-charya. 2008. A randomized, placebo-controlled trial of the bivalent killed, whole-cell, oral cholera vaccine in adults and children in a cholera endemic area in Kolkata, India. PLoS One 3, e2323.

    Article  PubMed  Google Scholar 

  • Maiti, D., B. Das, A. Saha, R.K. Nandy, G.B. Nair, and R.K. Bhadra. 2006. Genetic organization of pre-CTX and CTX pro-phages in the genome of an environmental Vibrio cholerae non-O1, non-O139 strain. Microbiology 152, 3633–3641.

    Article  CAS  PubMed  Google Scholar 

  • Nair, G.B., S.M. Faruque, N.A. Bhuiyan, M. Kamruzzaman, A.K. Siddique, and D.A. Sack. 2002. New variants of Vibrio cholerae O1 biotype E1 Tor with attributes of the classical biotype from hospitalized patients with acute diarrhea in Bangladesh. J. Clin. Microbiol. 40, 3296–3299.

    Article  PubMed  Google Scholar 

  • Nair, G.B., F. Qadri, J. Holmgren, A.M. Svennerholm, A. Safa, N.A. Bhuiyan, Q.S. Ahmad, S.M. Faruque, A.S. Faruque, Y. Takeda, and D.A. Sack. 2006. Cholera due to altered E1 Tor strains of Vibrio cholerae O1 in Bangladesh. J. Clin. Microbiol. 44, 4211–4213.

    Article  CAS  PubMed  Google Scholar 

  • Nguyen, B.M., J.H. Lee, N.T. Cuong, S.Y. Choi, N.T. Hien, D.D. Anh, H.R. Lee, M. Ansaruzzaman, H.P. Endtz, J. Chun, A.L. Lopez, C. Czerkinsky, J.D. Clemens, and D.W. Kim. 2009. Cholera outbreaks caused by an altered Vibrio cholerae O1 E1 Tor biotype strain producing classical cholera toxin B in Vietnam in 2007 to 2008. J. Clin. Microbiol. 47, 1568–1571.

    Article  CAS  PubMed  Google Scholar 

  • Roychowdhury, A., A. Pan, D. Dutta, A.K. Mukhopadhyay, T. Ramamurthy, R.K. Nandy, S.K. Bhattacharya, and M.K. Bhatta-charya. 2008. Emergence of tetracycline-resistant Vibrio cholerae O1 serotype Inaba, in Kolkata, India. Jpn. J. Infec. Dis. 61, 128–129.

    Google Scholar 

  • Sack, D.A., R.B. Sack, G.B. Nair, and A.K. Siddique. 2004. Cholera. Lancet 363, 223–233.

    Article  CAS  PubMed  Google Scholar 

  • Safa, A., N.A. Bhuyian, S. Nusrin, M. Ansaruzzaman, M. Alam, T. Hamabata, Y. Takeda, D.A. Sack, and G.B. Nair. 2006. Genetic characteristics of Matlab variants of Vibrio cholerae O1 that are hybrids between classical and E1 Tor biotypes. J. Med. Microbiol. 55, 1563–1569.

    Article  CAS  PubMed  Google Scholar 

  • Udden, S.M., M.S. Zahid, K. Biswas, Q.S. Ahmad, A. Cravioto, G.B. Nair, J.J. Mekalanos, and S.M. Faruque. 2008. Acquisition of classical CTX prophage from Vibrio cholerae O141 by E1 Tor strains aided by lytic phages and chitin-induced competence. Proc. Natl. Acad. Sci. USA 105, 11951–11956.

    Article  CAS  PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Dong Wook Kim.

Additional information

These authors contributed equally to this work.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Lee, J.H., Choi, S.Y., Jeon, YS. et al. Classification of hybrid and altered Vibrio cholerae strains by CTX prophage and RS1 element structure. J Microbiol. 47, 783–788 (2009). https://doi.org/10.1007/s12275-009-0292-6

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s12275-009-0292-6

Keywords

Navigation