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Novel genic microsatellite markers from Cajanus scarabaeoides and their comparative efficiency in revealing genetic diversity in pigeonpea

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References

  • Abdelnoor R. V., Barros E. G. and Moreira M. A. 1995 Determination of genetic diversity within Brazilian soybean germplasm using random amplified DNA amplification techniques and comparative analysis with pedigree data. Braz. J. Genet. 18, 265–273.

    CAS  Google Scholar 

  • Burns M. J., Edwards K. J., Newburg H. J., Ford Loyd B. V. and Baggott C. D. 2001 Development of simple sequence repeat (SSR) markers for the assessment of gene flow and genetic diversity in pigeonpea (Cajanus cajan). Mol. Ecol. Notes 4, 283–285.

    Article  Google Scholar 

  • Chen X., Salamini F. and Gebhardt C. 2001 A potato molecular function map for charbohydrate metabolism and transport. Theor. Appl. Genet. 102, 284–295.

    Article  CAS  Google Scholar 

  • Cordeiro G. M., Casu R., McIntyre C. L., Manners J. M. and Henry R. J. 2001 Microsatellite markers from sugarcane (Saccharum spp.) ESTs cross transferable to erianthus and sorghum. Plant Sci. 160, 1115–1123.

    Article  CAS  PubMed  Google Scholar 

  • Decroocq V., Fave M. G., Hagen L., Bordenave L. and Decroocq S. 2003 Development and transferability of apricot and grape EST microsatellite markers across taxa. Theor. Appl. Genet. 106, 912–922.

    Article  CAS  PubMed  Google Scholar 

  • Dutta S., Kumawat G., Singh B. P., Gupta D. K., Singh S., Dogra V. et al. 2011 Development of genic-SSR markers by deep transcriptome sequencing in pigeonpea (Cajanus cajan (L.) Millspaugh]. BMC Plant Biol. 11, 17.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Holton T. A., Christopher J. T., McClure L., Harker N. and Henry R. J. 2002 Identification and mapping of polymorphic SSR markers from expressed sequences of barley and wheat. Mol. Breeding 9, 63–71.

    Article  CAS  Google Scholar 

  • Jaccard P. 1908 Nouvelle recherches sur La distribution florale. Bulletin de la Société Vaudoise des Sciences Naturelles 44, 223–270.

    Google Scholar 

  • Mantel N. 1967 Detection of disease clustering and a generalized regression approach. Cancer Res. 27, 209–220.

    CAS  PubMed  Google Scholar 

  • Odeny D. A., Jayashree B., Ferguson M., Hoisington D., Crouch J. and Gebhardt C. 2007 Development, characterization and utilization of microsatellite markers in pigeonpea. Plant Breeding 126, 130–136.

    Article  CAS  Google Scholar 

  • Odeny D. A., Jayashree B., Gebhardt C. and Crouch J. 2009 New microsatellite markers for pigeonpea (Cajanus cajan (L) Millsp.). BMC Res. Notes.

  • Rohlf F. 1998 NTSYSpc: Numerical Taxonomy System, Version 2.2 (2). Exeter Publishing Ltd: Setauket, New York, USA.

    Google Scholar 

  • Scott K. D., Eggler P., Seaton G., Rossetto M., Ablett E. M., Lee L. S. and Henry R. J. 2000 Analysis of SSRs derived from grape ESTs. Theor. Appl. Genet. 100, 723–726.

    Article  CAS  Google Scholar 

  • Singh N. K., Gupta D. K., Jayaswal P. K., Mahato A. K., Dutta S., Singh S. et al. 2012 The first draft of the pigeonpea genome sequence. J. Pl. Biochem. Biotech. 21, 98–112.

    Article  Google Scholar 

  • Thiel T., Michalek W., Varshney R. K. and Graver A. 2003 Exploiting EST databases for the development and characterization of gene-derived SSR-markers in barley (Hordeum vulgare L.). Theor. Appl. Genet. 106, 411–422.

    Article  CAS  PubMed  Google Scholar 

  • Varshney R. K., Graner A. and Sorrells E. 2005 Genic microsatellite markers in plants: features and applications. Trends Biotechnol. 23, 48–55.

    Article  CAS  PubMed  Google Scholar 

  • Varshney R. K., Chen W., Li Y., Bharti A. K., Saxena R. K., Schlueter J. A. et al. 2012 Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers. Nat. Biotech. 30, 83–89.

    Article  CAS  Google Scholar 

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Correspondence to SUBHOJIT DATTA.

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[Datta S., Singh P., Mahfooz S., Patil G. P. , Chaudhary A. K., Agbagwa I. O. and Nadarajan N. 2013 Novel genic microsatellite markers from Cajanus scarabaeoides and their comparative efficiency in revealing genetic diversity in pigeonpea. J. Genet. 92, e24–e30. Online only: http://www.ias.ac.in/jgenet/OnlineResources/92/e24.pdf]

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DATTA, S., SINGH, P., MAHFOOZ, S. et al. Novel genic microsatellite markers from Cajanus scarabaeoides and their comparative efficiency in revealing genetic diversity in pigeonpea . J Genet 93 (Suppl 2), 24–30 (2016). https://doi.org/10.1007/s12041-013-0230-6

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