Skip to main content
Log in

Chromosomal localization of rDNA genes and genomic organization of 5S rDNA in Oreochromis mossambicus, O. urolepis hornorum and their hybrid

  • Research Article
  • Published:
Journal of Genetics Aims and scope Submit manuscript

Abstract

In this study, classical and molecular cytogenetic analyses were performed in tilapia fishes, Oreochromis mossambicus (XX/XY sex determination system), O. urolepis hornorum (WZ/ZZ sex determination system) and their hybrid by crossing O. mossambicus female × O. u. hornorum male. An identical karyotype ((2n = 44, NF (total number of chromosomal arms) = 50) was obtained from three examined tilapia samples. Genomic organization analysis of 5S rDNA revealed two different types of 5S rDNA sequences, 5S type I and 5S type II. Moreover, fluorescence in situ hybridization (FISH) with 5S rDNA probes showed six positive fluorescence signals on six chromosomes of all the analysed metaphases from the three tilapia samples. Subsequently, 45S rDNA probes were also prepared, and six positive fluorescence signals were observed on three chromosome pairs in all analysed metaphases of the three tilapia samples. The correlation between 45 rDNA localization and nucleolar organizer regions (NORs) was confirmed by silver nitrate staining in tilapia fishes. Further, different chromosomal localizations of 5S rDNA and 45S rDNA were verified by two different colour FISH probes. Briefly, the current data provide an insights for hybridization projects and breeding improvement of tilapias.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Affonso P. R. and Pedro M. G. 2005 Chromosomal diversification of reef fishes from genus Centropyge (Perciformes, Pomacanthidae). Genetica 123, 227–233.

    Article  CAS  PubMed  Google Scholar 

  • Alves-Costa F. A., Wasko A. P., Oliveira C., Foresti F. and Martins C. 2006 Genomic organization and evolution of the 5S ribosomal DNA in Tilapiine fishes. Genetica 127, 243–252.

    Article  CAS  PubMed  Google Scholar 

  • Brinn A. M., Porto J. R. and Feldberg E. 2004 Karyological evidence for interspecific hybridization between Cichla monoculus and C. temensis (Perciformes, Cichlidae) in the Amazon. Hereditas 141, 252–257.

    Article  PubMed  Google Scholar 

  • Chen M. R. and Chen H. X. 1983 A comparative study of karyotypes in three Tilapia fishes. Acta. Genet. Sinica 10, 56–62. (in Chinese).

    Google Scholar 

  • Feldberg E. and Bertollo L. A. 1985 Nucleolar Organizing regions in some species of Neotropical cichlid fish (Pisces, Perciformes). Caryologia 38, 319–324.

    Google Scholar 

  • Feldberg E., Porto J. I. and Bertollo L. A. 2003 Chromosomal changes and adaptation of cichlid fishes during evolution. In Fish adaptation (ed. A. L. Val and B. G. Kapoor), pp. 285–308. Science Publishers, New York, USA.

    Google Scholar 

  • Ferro D. A., Néo D. M., Moreira-Filho O. and Bertollo L. A. 2001 Nucleolar organizing regions, 18S and 5S rDNA in Astyanax scabripinnis (Pisces, Characidae), populations distribution and functional diversity. Genetica 110, 55–62.

    Article  Google Scholar 

  • Fishelson L. 1966 Cichlidae of the genus of Tilapia in Israel. Bamidgeh 18, 67–89.

    Google Scholar 

  • Foresti F., Oliveira C., Galetti Jr P. M. and Almeida-Toledo L. F. 1993 Synaptonemal complex analysis in spermatocytes of Tilapia, Oreochromis niloticus (Pisces, Cichlidae). Genome 36, 1124–1128.

    Article  CAS  PubMed  Google Scholar 

  • Fujiwara A., Fujiwara M., Nishida-Umehara C., Abe S. and Masaoka T. 2007 Characterization of Japanese flounder karyotype by chromosome bandings and fluorescence in situ hybridization with DNA markers. Genetica 131, 267–274.

    Article  PubMed  Google Scholar 

  • Fukuoka H. and Muramoto J. I. 1975 Somatic and meiotic chromosomes of Tilapia mossambica Peters. Chromosome Inf. Serv. 18, 4–6.

    Google Scholar 

  • Gao J. M. 1986 A description of in vivo technique for chromosome preparation in fish (Oreochromis andersonis) and its karyotype. Hereditas 8, 42–44 (in Chinese).

    Google Scholar 

  • Gui J. F. 1999 Fish developmental genetics and artificial propagation, In Fish genetics and breeding engineering (ed. C. Wu and J. F. Gui), pp. 41–62. Shanghai Scientific and Technical Publishers, Shanghai, P. R. China.

    Google Scholar 

  • Hickling C. F. 1960 The Malacca Tilapia hybrids. J. Genet. 57, 1–10.

    Article  Google Scholar 

  • Hinegardner R. and Rosen D. E. 1972 Cellular DNA content and the evolution of teleostean fishes. Am. Nat. 106, 621–644.

    Article  CAS  Google Scholar 

  • Kakagawa S. M., Portela-Castro M. A. and Martins-Santos I. C. 2007 A Study of nucleolus organizing regions by Ag-staining, in situ hybridization and chromomycin A3 techniques in Tilapia rendalli (Cichlidae, Perciformes) of the river Iguaçu basin, Paraná, Brazil. Cytologia 72, 373–378.

    Article  Google Scholar 

  • Kevin F. 2008 Tilapia farming integrated with field crops: a new model for global farming. In Proceedings of the fifth international tilapia industry development forum (ed. H. Cui), pp. 2–12. HaiNan, Haikou, P. R. China.

    Google Scholar 

  • Kocher T. D. 2004 Adaptive evolution and explosive speciation, the cichlid fish model. Nat. Rev. Genet. 5, 288–298.

    Article  CAS  PubMed  Google Scholar 

  • Komiya H., Hasegawa M. and Takemura S. 1986 Differentiation of oocyte- and somatic-type 5S rRNAs in animals. J. Biochem. 100, 369–374.

    CAS  PubMed  Google Scholar 

  • Kornfield I. L., Ritte U., Richler C. and Wahrman J. 1979 Biochemical and cytological differentiation among Cichlid fishes of the Sea of Galilee. Evolution 33, 1–14.

    Article  CAS  Google Scholar 

  • Kwon J. K. and Kim B. D. 2009 Localization of 5S and 25S rRNA Genes on somatic and meiotic chromosomes in Capsicum species of chili pepper. Mol. Cell 27, 205–209.

    Article  CAS  Google Scholar 

  • Laura M., Mary D. and Delany E. 2003 Molecular and cytogenetic organization of the 5S ribosomal DNA array in chicken (Gallus gallus). Chromosome Res. 11, 305–317.

    Article  Google Scholar 

  • Liu Y. J. and Yu Q. X. 1991 Electron microscopic observation of synaptonemal complexes in spermatocytes of six species of fishes. Acta Genet. Sinica 18, 407–414 (in Chinese).

    Google Scholar 

  • Lomholt B., Christensen K., Hallenberg C. and Frederiksen S. 1995 Porcine 5S rRNA genes map to 14q23 revealing syntenic relation to human HSPA-6 and -7. Mamm. Genome 6, 439–441.

    Article  CAS  PubMed  Google Scholar 

  • Long E. O. and David I. D. 1980 Repeated genes in eukaryotes. Annu. Rev. Biochem. 49, 727–764.

    Article  CAS  PubMed  Google Scholar 

  • Martins C., Oliveira C., Wasko A. P. and Wright J. M. 2004 Physical mapping of the Nile tilapia (Oreochromis niloticus) genome by fluorescent in situ hybridization of repetitive DNAs to metaphase chromosomes-a review. Aquaculture 231, 37–49.

    Article  CAS  Google Scholar 

  • Martins C., Ferreira I. A., Oliveira C., Foresti F. and Galetti Jr P.M. 2006 A tandemly repetitive centromeric DNA sequence of the fish Hoplias malabaricus (Characiformes: Erythrinidae) is derived from 5S rDNA. Genetica 127, 133–141.

    Article  CAS  PubMed  Google Scholar 

  • Martins C., Wasko A. P., Oliveira C., Porto-Foresti F., Parise-Maltempi P. P., Wright J. M. and Foresti F. 2002 Dynamics of 5S rDNA in the tilapia (Oreochromis niloticus) genome: repeat units, inverted sequences, pseudogenes and chromosome loci. Cytogenet. Genome Res. 98, 78–85.

    Article  CAS  PubMed  Google Scholar 

  • Martins C. P. and Galetti P. M. 2001 Organization of 5S rDNA in species of the fish Leporinus: two different genomic locations are characterized by distinct nontranscribed spacers. Genome 44, 903–910.

    Article  CAS  PubMed  Google Scholar 

  • Martins I. C., Portella-Castro A. L. and Julio Jr H. F. 1995 Chromosome analysis of five species of the Cichlidae family (Pisces-Perciformes) from the Paran river. Cytologia 60, 223–231.

    Google Scholar 

  • Mazzuchelli J. and Martins C. 2009 Genomic organization of repetitive DNAs in the cichlid fish Astronotus ocellatus. Genetica 136, 461–469.

    Article  CAS  PubMed  Google Scholar 

  • Morescalchi M. A., Liguori I., Rocco L., Archimandritis A. and Stingo V. 2008 Karyotypic characterization and genomic organization of the 5S rDNA in Polypterus senegalus (Osteichthyes, Polypteridae). Genetica 132, 179–186.

    Article  CAS  PubMed  Google Scholar 

  • Nirchio M., Oliveira C., Ferreira I. A., Martins C., Rossi A. R. and Sola L. 2009 Classical and molecular cytogenetic characterization of Agonostomus monticola, a primitive species of Mugilidae (Mugiliformes). Genetica 135, 1–5.

    Article  PubMed  Google Scholar 

  • Pendás A. M., Morán P., Freije J. P. and García-Vázquez E. 1994 Chromosomal mapping and nucleotide sequence of two tandem repeats of Atlantic salmon 5S rDNA. Cytogenet. Cell Genet. 67, 31–36.

    Article  PubMed  Google Scholar 

  • Puerma E., Acosta M. J., Barragán M. J., Martínez S., Marchal J. A., Bullejos M. and Sánchez A. 2008 The karyotype and 5S rRNA genes from Spanish individuals of the bat species Rhinolophus hipposideros (Rhinolophidae; Chiroptera). Genetica 134, 287–295.

    Article  PubMed  Google Scholar 

  • Sambrook J. and Russell D. W. 2001 Molecular cloning: A laboratory manual, 3rd edition. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, USA.

    Google Scholar 

  • Suzuki H., Sakurai S. and Matsuda, Y. 1996 Rat rDNA spacer sequences and chromosomal assignment of the genes to the extreme terminal region of chromosome 19. Cytogenet. Cell Genet. 72, 1–4.

    Article  CAS  PubMed  Google Scholar 

  • Tave D. 1995 Production of all-male Tilapia aurea by sex-reversed broodstock. Aquaculture 96, 78–81.

    Google Scholar 

  • Thompson K.W. 1981 Karyotypes of six species of African Cichlidae (Pisces: Perciformes). Experientia 37, 351–352.

    Article  CAS  PubMed  Google Scholar 

  • Vervoort A. 1980 The karyotypes of seven species of Tilapia (Teleostei: Cichlidae). Cytologia 45, 651–656.

    Google Scholar 

  • Wang R. F., Ma K., Shi L. M. and He W. S. 1990 Studies on C-,Ag-banding chromosomes and meiotic synaptonemal compiex of tilapia nilotica. Zoological Res. 11, 349–354 (in Chinese).

    Google Scholar 

  • Yang S., Wang K. Y., Huang Z. H. and Lu M. X. 2008 Studies on the principal biological characteristics of Oreochromis hornorumï Oreochromis mossambicus and the growth performance of hybrid F1. J. Sichuan Agri. Univ. 23, 93–98 (in Chinese).

    Google Scholar 

  • Yi M. S., Li Y. Q., Liu J. D., Zhou L., Yu Q. X. and Gui J. F. 2003 Molecular cytogenetic detection of paternal chromosome fragments in allogynogenetic gibel carp, Carassius auratus gibelio Bloch. Chromosome Res. 11, 665–671.

    Article  CAS  PubMed  Google Scholar 

  • Yogeeswaran K., Frary A., York T. L., Amenta A., Lesser A. H., Nasrallah J. B. et al. 2005 Comparative genome analyses of Arabidopsis spp.: inferring chromosomal rearrangement events in the evolutionary history of A. thaliana. Genome Res. 15, 505–515.

    Article  CAS  PubMed  Google Scholar 

  • Yu X. J., Zhou T., Li Y. C., Li K. and Zhou M. 1989 Chromosomes of Chinese fresh-water fishes, pp. 146–147. Science Press, Beijing, P. R. China.

    Google Scholar 

  • Zhu H. P. and Gui J. F. 2007 Identification of genome organization in the unusual allotetraploid form of Carassius auratus gibelio. Aquaculture 265, 109–117.

    Article  CAS  Google Scholar 

  • Zhu H. P., Ma D. M. and Gui J. F. 2006 Triploid origin of the gibel carp as revealed by 5S rDNA localization and chromosome painting. Chromosome Res. 14, 767–776.

    Article  CAS  PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Mai Xin Lu.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Zhu, H.P., Lu, M.X., Gao, F.Y. et al. Chromosomal localization of rDNA genes and genomic organization of 5S rDNA in Oreochromis mossambicus, O. urolepis hornorum and their hybrid. J Genet 89, 163–171 (2010). https://doi.org/10.1007/s12041-010-0022-1

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s12041-010-0022-1

Keywords

Navigation