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Aptamer-Based Technology for Food Analysis

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Abstract

Aptamers are short and functional single-stranded oligonucleotide sequences selected from systematic evolution of ligands by exponential enrichment (SELEX) process, which have the capacity to recognize various classes of target molecules with high affinity and specificity. Various analytical aptamers acquired by SELEX are widely used in many research fields, such as medicine, biology, and chemistry. However, the application of this innovative and emerging technology to food safety is just in infant stage. Food safety plays a very important role in our daily lives because varieties of poisonous and harmful substances in food affect human health. Aptamer technique is promising, which can overcome many disadvantages of existing detection methods in food safety, such as long detection time, low sensitivity, difficult, and expensive antibody preparation. This review provides an overview of various aptamer screening technologies and summarizes the recent applications of aptamers in food safety, and future prospects are also discussed.

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References

  1. Ellington, A. D., & Szostak, W. I. (1990). Nature, 346(6287), 818–822.

    CAS  Google Scholar 

  2. Marimuthu, C., Tang, T. H., Tominaga, J., et al. (2012). Analyst, 137(6), 1307–1315.

    CAS  Google Scholar 

  3. Hyeon, J. Y., Chon, J. W., Choi, I. S., et al. (2012). Journal of Microbiological Methods, 89(1), 79–82.

    CAS  Google Scholar 

  4. Yang, Y., Yang, D. L., Schluesener, H. J., et al. (2007). Biomolecular Engineering, 24, 583–592.

    CAS  Google Scholar 

  5. Omidinia, E., Shadjou, N., & Hasanzadeh, M. (2014). Applied Biochemistry and Biotechnology, 172(4), 2070–2080.

    CAS  Google Scholar 

  6. Mie, M., Kai, T., Le, T., et al. (2013). Applied Biochemistry and Biotechnology, 169(1), 250–255.

    CAS  Google Scholar 

  7. He, C., Xu, Z., Sun, T., et al. (2014). Applied Biochemistry and Biotechnology, 172(2), 1018–1026.

    CAS  Google Scholar 

  8. Sun, W., Du, L., & Li, M. (2010). Current Pharmaceutical Design, 16(20), 2269–2278.

    CAS  Google Scholar 

  9. Dastjerdi, K., Tabar, G. H., Dehghani, H., et al. (2011). Biotechnology and Applied Biochemistry, 58(4), 226–230.

    CAS  Google Scholar 

  10. Pestourie, C., Tavitian, B., & Duconge, F. (2005). Biochimie, 87, 921–930.

    CAS  Google Scholar 

  11. Xu, D. M., Wu, M., Zou, Y., et al. (2011). Chinese Journal of Analytical Chemistry, 39(6), 925–933.

    CAS  Google Scholar 

  12. Hamula, C. L. A., Guthrie, J. W., Hongquan, Z., et al. (2006). TrAC, Trends in Analytical Chemistry, 25(7), 681–691.

    CAS  Google Scholar 

  13. He, J., Liu, Y., Fan, M., et al. (2011). Journal of Agricultural and Food Chemistry, 59(5), 1582–1586.

    CAS  Google Scholar 

  14. Liang, A. H., Zhou, L. P., Qin, H. M., et al. (2011). Journal of Fluorescence, 21(5), 1907–1912.

    CAS  Google Scholar 

  15. Tanaka, Y., Akagi, K., Nakamura, Y., et al. (2007). Oligonucleotides, 17(1), 12–21.

    CAS  Google Scholar 

  16. Xu, S. M., Yuan, H., Chen, S. P., et al. (2012). Analytical Biochemistry, 423(2), 195–201.

    CAS  Google Scholar 

  17. Zeng, X. D., Zhang, X. L., Yang, W., et al. (2012). Analytical Biochemistry, 424(1), 8–11.

    CAS  Google Scholar 

  18. Deisingh, A. K. (2006). Handbook of Experimental Pharmacology, 173, 341–357.

    CAS  Google Scholar 

  19. Phillips, J. A., Lopez-Colon, D., Zhu, Z. Y., et al. (2008). Analytica Chimica Acta, 621(2), 101–108.

    CAS  Google Scholar 

  20. Tombelli, S., & Mascini, M. (2010). Combinatorial Chemistry and High Throughput Screening, 13(7), 641–649.

    CAS  Google Scholar 

  21. Huang, C. C., & Chang, H. T. (2008). Chemical Communications, 12, 1461–1463.

    Google Scholar 

  22. Zuo, X. L., Song, S. P., Zhang, J., et al. (2007). Journal of the American Chemical Society, 129(5), 1042–1043.

    CAS  Google Scholar 

  23. Liang, M., Liu, R., Su, R. X., et al. (2012). Progress in the Chemistry, 24(7), 1378–1387.

    CAS  Google Scholar 

  24. Havelaar, A. H., Brul, S., de Jong, A., et al. (2010). International Journal of Food Microbiology, 139(Suppl1), 79–94.

    Google Scholar 

  25. Yadav, R., Dwivedi, S., Kumar, S., et al. (2010). Food and Environmental Virology, 2(2), 53–63.

    Google Scholar 

  26. Wang, L., Ma, W., Chen, W., et al. (2011). Biosensors and Bioelectronics, 26(6), 3059–3062.

    CAS  Google Scholar 

  27. Zhang, J., Wang, L. H., Pan, D., et al. (2008). Small, 4(8), 1196–1200.

    CAS  Google Scholar 

  28. Golub, E., Pelossof, G., Freeman, R., et al. (2009). Analytical Chemistry, 81(22), 9291–9298.

    CAS  Google Scholar 

  29. Mayer, K. M., & Hagner, J. H. (2011). Chemical Reviews, 111(6), 3828–3857.

    CAS  Google Scholar 

  30. Yakes, B. J., Deeds, J., White, K., et al. (2011). Journal of Agricultural and Food Chemistry, 59(3), 839–846.

    CAS  Google Scholar 

  31. Yang, X. H., Huang, J. H., Wang, Q., et al. (2011). Analytical Methods, 3, 59–61.

    CAS  Google Scholar 

  32. Lin, Y. W., Liu, C. W., & Chang, H. T. (2011). Talanta, 84(2), 324–329.

    CAS  Google Scholar 

  33. Liu, C. W., Huang, C. C., & Chang, H. T. (2009). Analytical Chemistry, 81(6), 2383–2387.

    CAS  Google Scholar 

  34. Stead, S. L., Helen, A., Brian, H. J., et al. (2010). Analytical Chemistry, 82(7), 2652–2660.

    CAS  Google Scholar 

  35. Kuang, H., Chen, W., Xu, D., et al. (2010). Biosensors and Bioelectronics, 26(2), 710–716.

    CAS  Google Scholar 

  36. Lee, J., Jo, M., Kim, T. H., et al. (2011). Lab on a Chip, 11(1), 52–56.

    CAS  Google Scholar 

  37. De Girolamo, A., McKeague, M., Miller, J. D., et al. (2011). Food Chemistry, 127, 1378–1384.

    Google Scholar 

  38. McKeague, M., Bradley, C. R., Girolamo, A. D., et al. (2010). International Journal of Molecular Sciences, 11(12), 4864–4881.

    CAS  Google Scholar 

  39. Stoltenburg, R., Reinemann, C., & Strehlitz, B. (2007). Biomolecular Engineering, 24, 381–403.

    CAS  Google Scholar 

  40. Alocilja, E. C., & Radke, S. M. (2003). Biosensors and Bioelectronics, 18(5–6), 841–846.

    CAS  Google Scholar 

  41. Vassioukovitch, O., Orsini, M., Paparini, A., et al. (2005). Biotechnology Annual Review, 11, 335–354.

    CAS  Google Scholar 

  42. Nugen, S. R., & Baeumner, A. J. (2008). Analytical and Bioanalytical Chemistry, 391(2), 451–454.

    CAS  Google Scholar 

  43. Bruno, J. G., Phillips, T., Carrillo, M. P., et al. (2009). Journal of Fluorescence, 19(3), 427–435.

    CAS  Google Scholar 

  44. Cao, X. X., Li, S. H., Chen, L. C., et al. (2009). Nucleic Acids Research, 37(14), 4621–4628.

    CAS  Google Scholar 

  45. Joshi, R., Janagama, H., Dwivedi, H. P., et al. (2009). Molecular and Cellular Probes, 23, 20–28.

    CAS  Google Scholar 

  46. Pan, Q., Zhang, X. L., Wu, H. Y., et al. (2005). Antimicrobial Agents and Chemotherapy, 49(10), 4052–4060.

    CAS  Google Scholar 

  47. Ikanovic, M., Rudzinski, W. E., Bruno, J. G., et al. (2007). Journal of Fluorescence, 17, 193–199.

    CAS  Google Scholar 

  48. Li, F., Zhang, J., Cao, X. N., et al. (2009). Analyst, 134(7), 1355–1360.

    CAS  Google Scholar 

  49. Seo, H. K., Holt, P. S., Stone, H. D., et al. (2003). Journal of Food Microbiology, 87(1–2), 139–144.

    Google Scholar 

  50. Seo, H. K., Holt, P. S., Valentin-Bon, I. E., Brackett, R. E., et al. (2004). Journal of Food Protection, 67(5), 864–869.

    CAS  Google Scholar 

  51. Ma, X., Jiang, Y., Jia, F., et al. (2014). Journal of Microbiological Methods, 98, 94–98.

    CAS  Google Scholar 

  52. Park, H.C., Baig, I.A., Lee, S.C., et al. (2014). Appl Biochem Biotechnol. [Epub ahead of print].

  53. Ohk, S. H., Koo, O. K., Sen, T., et al. (2010). TrAC, Trends in Analytical Chemistry, 109(3), 808–817.

    CAS  Google Scholar 

  54. Suh, S. H., & LA Jaykus, J. (2013). Biotechnology, 167(4), 454–461.

    CAS  Google Scholar 

  55. Suh, S. H., Dwivedi, H. P., Choi, S. J., et al. (2014). Analytical Biochemistry, 459, 39–45.

    CAS  Google Scholar 

  56. Lee, H. J., Kim, B. C., Kim, K. W., et al. (2009). Biosensors and Bioelectronics, 24(12), 3550–3555.

    CAS  Google Scholar 

  57. Wu, W. H., Chen, Y., & Jiang, L. Q. (2010). Chinese Journal of Laboratory and Medicine, 33(7), 587–593.

    CAS  Google Scholar 

  58. He, L., Deen, B. D., Pagel, A. H., et al. (2013). Analyst, 138(6), 1657–1659.

    CAS  Google Scholar 

  59. He, X., Li, Y., He, D., et al. (2014). Journal of Biomedical Nanotechnology, 10(7), 1359–1368.

    CAS  Google Scholar 

  60. Wu, S., Duan, N., Shi, Z., et al. (2014). Analytical Chemistry, 86(6), 3100–3107.

    CAS  Google Scholar 

  61. Edith, T. C., & Alocilja, E. C. (2009). Biosensors and Bioelectronics, 24(11), 3175–3182.

    Google Scholar 

  62. Lin, P. H., Chen, R. H., Lee, C. H., et al. (2011). Colloids and Surfaces B: Biointerfaces, 88(2), 552–558.

    CAS  Google Scholar 

  63. Ye, B. F., Zhao, Y. J., Cheng, Y., et al. (2012). Nanoscale, 4(19), 5998–6003.

    CAS  Google Scholar 

  64. Shen, T., Yue, Q., Jiang, X., et al. (2013). Talanta, 117, 81–86.

    CAS  Google Scholar 

  65. Chu, F. S. (1991). Mutation Research, 259(3–4), 291–306.

    CAS  Google Scholar 

  66. Bryden, W. L. (2007). Asia Pacific Journal of Clinical Nutrition, 16(Suppl1), 95–101.

    CAS  Google Scholar 

  67. Tombelli, S., Minunni, M., & Mascini, M. (2007). Biomolecular Engineering, 24, 191–200.

    CAS  Google Scholar 

  68. Kirby, R., Cho, E. J., Gehrke, B., et al. (2004). Analytical Chemistry, 76(14), 4066–4075.

    CAS  Google Scholar 

  69. Haes, A. J., Giordano, B. C., & Collins, G. E. (2006). Analytical Chemistry, 78(11), 3758–3764.

    CAS  Google Scholar 

  70. Bruno, J.G., Kiel, J.L (2002). Biotechniques 32(1):178–80,182-3.

  71. Lamont, E. A., He, L., Warriner, K., et al. (2011). Analyst, 136(19), 3884–3895.

    CAS  Google Scholar 

  72. He, L. L., Lamont, E., & Veeregowda, B. (2011). Chemical Science, 2, 1579–1582.

    CAS  Google Scholar 

  73. Tang, J. J., Yu, T., Guo, L., et al. (2007). Biosensors and Bioelectronics, 22(11), 2456–2463.

    CAS  Google Scholar 

  74. Chen, J. H., Fang, Z. Y., Liu, J., et al. (2012). Food Control, 25(2), 555–560.

    CAS  Google Scholar 

  75. Cruz-Aguado, J. A., & Penner, G. (2008). Journal of Agricultural and Food Chemistry, 56(22), 10456–10461.

    CAS  Google Scholar 

  76. De Girolamo, A., Le, L., Penner, G., et al. (2012). Analytical and Bioanalytical Chemistry, 403, 2627–2634.

    Google Scholar 

  77. Barthelmebs, L., Jonca, J., Hayat, A., et al. (2011). Food Control, 22(5), 737–743.

    CAS  Google Scholar 

  78. Barthelmebs, L., Hayat, A., Limiadi, A. W., et al. (2011). Sensors and Actuators B, 156(2), 7932–7937.

    Google Scholar 

  79. Duan, N., Wu, S. J., & Wang, Z. P. (2011). Chinese Journal of Analytical Chemistry, 39(3), 300–304.

    CAS  Google Scholar 

  80. Lv, Z., Chen, A., Liu, J., et al. (2014). PLoS One, 9(1), e85968.

    Google Scholar 

  81. Wei, F., & Ho, C. M. (2009). Analytical and Bioanalytical Chemistry, 393(8), 1943–1948.

    CAS  Google Scholar 

  82. Janardhanan, P., Mello, C. M., Singh, B. R., et al. (2013). Talanta, 117, 273–280.

    CAS  Google Scholar 

  83. Sun, X. L., Zhao, X. L., Tang, J., et al. (2006). Food Control, 17(4), 256–262.

    CAS  Google Scholar 

  84. Mehle, N., Nikolić, P., Gruden, K., et al. (2013). Methods in Molecular Biology, 938, 269–281.

    CAS  Google Scholar 

  85. Nguyen, B. H., Tran, L. D., Do, Q. P., et al. (2013). Materials Science and Engineering C: Materials for Biological Applications, 33(4), 2229–2234.

    CAS  Google Scholar 

  86. Guo, X., Wen, F., Zheng, N., et al. (2014). Biosensors and Bioelectronics, 56, 340–344.

    CAS  Google Scholar 

  87. Chen, X., Huang, Y., Duan, N., et al. (2013). Analytical and Bioanalytical Chemistry, 405(20), 6573–6581.

    CAS  Google Scholar 

  88. Argudin, M. A., Mendoza, M. C., & Rodicio, M. R. (2010). Toxins, 2, 1751–1773.

    CAS  Google Scholar 

  89. DeGrasse, J. A. (2012). PLoS One, 7(3), e33410.

    CAS  Google Scholar 

  90. Huang, Y., Chen, X., Duan, N., et al. (2015). Food Chemistry, 166, 623–629.

    CAS  Google Scholar 

  91. Lalumera, G. M., Calamari, D., Galli, P., et al. (2004). Chemosphere, 54(5), 661–668.

    CAS  Google Scholar 

  92. Zhou, L., Li, D. J., Gai, L., et al. (2012). Sensors and Actuators B, 162(1), 201–208.

    CAS  Google Scholar 

  93. Fan, T., Zhang, J. K., Li, M., et al. (2011). Chinese Journal of Bioprocess Engineering, 9(3), 41–46.

    CAS  Google Scholar 

  94. Kim, Y. S., Niazi, J. H., & Gu, M. B. (2009). Analytica Chimica Acta, 634, 250–254.

    CAS  Google Scholar 

  95. Lato, S. M., Boles, A. R., & Ellington, A. D. (1995). Chemical Biology, 2(5), 291–303.

    CAS  Google Scholar 

  96. Niazi, J. H., Lee, S. J., Kim, Y. S., et al. (2008). Bioorganic and Medicinal Chemistry, 16(3), 1254–1261.

    CAS  Google Scholar 

  97. Niazi, J. H., Lee, S. J., Gu, M. B., et al. (2008). Bioorganic and Medicinal Chemistry, 16(15), 7245–7253.

    CAS  Google Scholar 

  98. Kim, Y. J., Kim, Y. S., Niazi, J. H., et al. (2010). Bioprocess and Biosystems Engineering, 33(1), 31–37.

    CAS  Google Scholar 

  99. Kim, Y. S., Kim, J. H., & Kim, I. N. (2010). Biosensors and Bioelectronics, 26(4), 1644–1649.

    CAS  Google Scholar 

  100. Kim, C. H., Lee, L. P., Min, J. R., et al. (2014). Biosensors and Bioelectronics, 51, 426–430.

    CAS  Google Scholar 

  101. Han, S. R., Yu, J., & Lee, S. W. (2014). Biochemical and Biophysical Research Communications, 448(4), 397–402.

    CAS  Google Scholar 

  102. Wang, S., Yong, W., Liu, J., et al. (2014). Biosensors and Bioelectronics, 57, 192–198.

    CAS  Google Scholar 

  103. Wochner, A., Menger, M., Orgel, D., et al. (2008). Analytical Biochemistry, 373(1), 34–42.

    CAS  Google Scholar 

  104. de-los-Santos-Álvarez, N., Lobo-Castañón, M. J., Miranda-Ordieres, A. J., et al. (2007). Journal of the American Chemical Society, 129(3), 3808–3809.

    Google Scholar 

  105. De-los-Santos-Álvarez, N., Lobo-Castañón, M. J., Miranda-Ordieres, A. J., et al. (2009). Biosensors and Bioelectronics, 24(8), 2547–2553.

    Google Scholar 

  106. Sun, X., Li, F., Shen, G., et al. (2014). Analyst, 139(1), 299–308.

    CAS  Google Scholar 

  107. Zhang, J. K., Zhang, B. B., Wu, Y., et al. (2010). Analyst, 135, 2706–2710.

    CAS  Google Scholar 

  108. Srivastava, S., Sinha, R., & Roy, D. (2004). Toxicology, 66(3), 319–329.

    CAS  Google Scholar 

  109. Wang, L., Liu, X. J., Zhang, Q., et al. (2012). Biotechnology Letters, 34(5), 869–874.

    CAS  Google Scholar 

  110. Wang, Y., He, J., Wang, L., et al. (2011). Journal of Nanjing Agricultural University, 34(3), 131–134.

    Google Scholar 

  111. Pang, S., Labuza, T. P., & He, L. (2014). Analyst, 139(8), 1895–1901.

    CAS  Google Scholar 

  112. Van Hengel, A. J. (2007). Analytical and Bioanalytical Chemistry, 389, 111–118.

    Google Scholar 

  113. Tran, D. T., Knez, K., Janssen, K. P., et al. (2013). Biosensors and Bioelectronics, 43, 245–251.

    CAS  Google Scholar 

  114. Nadal, P., Pinto, A., Svobodova, M., et al. (2012). PLoS One, 7(4), e35253.

    CAS  Google Scholar 

  115. Nadal, P., Svobodova, M., Mairal, T., et al. (2013). Analytical and Bioanalytical Chemistry, 405(29), 9343–9349.

    CAS  Google Scholar 

  116. Mairal, T., Nadal, P., Svobodova, M., et al. (2014). Biosensors and Bioelectronics, 54, 207–210.

    CAS  Google Scholar 

  117. Amaya-González, S., De-Los-Santos-Álvarez, N., Miranda-Ordieres, A. J., et al. (2014). Analytical Chemistry, 86(5), 2733–2739.

    Google Scholar 

  118. Yildirim, N., Long, F., Gao, C., et al. (2012). Environmental Science and Technology, 46(6), 3288–3294.

    CAS  Google Scholar 

  119. Fan, L., Zhao, G., Shi, H., et al. (2014). Environmental Science and Technology, 48(10), 5754–5761.

    CAS  Google Scholar 

  120. Rai, N., Banerjee, D., & Bhattacharyya, R. (2014). Nutrition, 30(4), 380–385.

    CAS  Google Scholar 

  121. Jiang, Z., Zhou, L., & Liang, A. (2011). Chemical communications (Cambridge), 47(11), 3162–3164.

    CAS  Google Scholar 

  122. Liang, A., Zhou, L., Qin, H., et al. (2011). Journal of Fluorescence, 21(5), 1907–1912.

    CAS  Google Scholar 

  123. Mei, Z., Chu, H., Chen, W., et al. (2013). Biosensors and Bioelectronics, 39(1), 26–30.

    CAS  Google Scholar 

  124. Kuang, H., Yin, H., Liu, L., et al. (2014). ACS Applied Materials & Interfaces, 6(1), 364–369.

    CAS  Google Scholar 

  125. Yildirim, N., Long, F., He, M., et al. (2014). Environmental Science Processes and Impacts, 16(6), 1379–1386.

    CAS  Google Scholar 

  126. Zhou, L., Wang, J., Li, D., et al. (2014). Food Chemistry, 162, 34–40.

    CAS  Google Scholar 

  127. Ulrich, H., Martins, A. H. B., & Pesquero, J. B. (2004). Cytometry. Part A, 59(2), 220–231.

    Google Scholar 

  128. Osborne, S. E., & Ellington, A. D. (1997). Chemical Reviews, 97(2), 349–370.

    CAS  Google Scholar 

  129. Neves, M. A. D., Reinstein, O., Saad, M., et al. (2010). Biophysical Chemistry, 153(1), 9–16.

    CAS  Google Scholar 

  130. Palchetti, I., & Mascini, M. (2012). Analytical and Bioanalytical Chemistry, 402(10), 3103–3114.

    CAS  Google Scholar 

  131. Shao, K., Ding, W., Wang, F., et al. (2011). PLoS One, 6(9), e24910.

    CAS  Google Scholar 

  132. He, C. Z., Zhang, K. H., Wang, T., et al. (2013). Analytical Biochemistry, 440(1), 63–70.

    CAS  Google Scholar 

  133. Berezovski, M. V., Musheev, M. U., Drabovich, A. P., et al. (2006). Nature Protocols, 1(3), 1359–1369.

    CAS  Google Scholar 

  134. Yu, X., & Yu, Y. (2014). Applied Biochemistry and Biotechnology, 173(8), 2019–2027.

    CAS  Google Scholar 

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Liu XF drafted the manuscript, and Zhang XW revised the manuscript.

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Liu, X., Zhang, X. Aptamer-Based Technology for Food Analysis. Appl Biochem Biotechnol 175, 603–624 (2015). https://doi.org/10.1007/s12010-014-1289-0

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