Abstract
The utility of transgenic plants for both experimental and practical agronomic purposes is highly dependent on stable, predictable, and heritable expression of the introduced genes. This requirement is frequently unfulfilled, and transgenes often are completely silenced. Studies of transgenic loci have shown that rearrangements of transgenes occur during the integration process, some of which are potent cues that induce silencing. Conversely, intact, single-copy transgenes produced via transposon-mediated gene delivery have shown relatively stable expression, at least in early-generation progeny. To examine the long-term expression stability of a bar expression cassette delivered via Dissociation (Ds)-mediated transposition, we examined qualitative and quantitative expression in barley (Hordeum vulgare L.) populations developed for transposon tagging. Qualitative assessments of herbicide resistance among 106 lines showed bar expression to be stable for at least five generations of advance via self-pollination. Similarly, qualitatively stable expression was observed among 31 near-isogenic lines derived from at least seven backcrosses to the cultivar Garnet. Quantitative RT-PCR measurements of bar expression were conducted for eight near-isogenic lines and their donor parents. The expression of bar was highly correlated in parent and progeny near-isogenic lines, showing high heritability of bar expression. These data demonstrate stable, predictable transgene expression following Ds-mediated delivery.
Similar content being viewed by others
References
Bregitzer P, Cooper LD, Hayes PM, Lemaux PG, Singh J, Sturbaum AK (2007) Viability and bar expression are negatively correlated in Oregon Wolfe barley dominant hybrids. Plant Biotech J 5:381–388
Bregitzer P, Tonks D (2003) Inheritance and expression of transgenes in barley, Hordeum vulgare L. Crop Sci 43:4–12
Brown RH, Dahleen LS, Bregitzer P (2012) An efficient method for flanking sequence isolation in barley. Crop Sci 52:1229–1234
Brown RH, Raboy V, Bregitzer P (2013) Unintended consequences: high phosphinothricin acetyltransferase activity related to reduced fitness in barley. In Vitro Cell Dev Biol—Plant (in press)
Choi HW, Lemaux PG, Cho MJ (2003) Long-term stability of transgene expression driven by barley endosperm-specific hordein promoters in transgenic barley. Plant Cell Rep 21:1108–1120
Choi HW, Yu XH, Lemaux PG, Cho MJ (2009) Stability and inheritance of endosperm-specific expression of two transgenes in progeny from crossing independently transformed barley plants. Plant Cell Rep 28:1265–1272
Cooper LD, Marquez-Cedillo L, Singh J, Sturbaum AK, Zhang S, Edwards V, Johnson K, Kleinhofs A, Rangel S, Carollo V, Bregitzer P, Lemaux PG, Hayes PM (2004) Mapping Ds insertions in barley using a sequence-based approach. Mol Gen Genomics 272:181–193
Cotsaftis O, Sallaud C, Breitler JC, Meynard D, Greco R, Pereira A, Guiderdoni E (2002) Transposon-mediated generation of T-DNA- and marker-free rice plants expressing a Bt- endotoxin gene. Mol Breed 10:165–180
Dai S, Zheng P, Marmey P, Zhang S, Tian W, Chen S, Beachy RN, Fauquet C (2001) Comparative analysis of transgenic rice plants obtained by Agrobacterium-mediated transformation and particle bombardment. Mol Breed 7:25–33
Deng W, Nickle DC, Learn GH, Maust B, Mullins JI (2007) ViroBLAST: a stand-alone BLAST web server for flexible queries of multiple databases and user’s datasets. Bioinformatics 23:2334–2336
Giulietti A, Overbergh L, Valckz D, Decallonne B, Bouillion R, Mathieu C (2001) An overview of real-time quantitative PCR: applications to quantify cytokine gene expression. Methods 25:386–401
Goldsbrough AP, Lastrella CN, Yoder JI (1993) Transposition mediated re-positioning and subsequent elimination of marker genes from transgenic tomato. Biotechnology 11:1286–1292
International Barley Genome Sequencing Consortium (2012) A physical, genetic, and functional sequence assembly of the barley genome. Nature 491:711–716. doi:10.1038/nature11543
Islam AKMR, Shepherd KW, Sparrow DHB (1981) Isolation and characterization of euplasmic wheat–barley chromosome addition lines. Heredity 46:161–174
Ito T, Motohashi R, Kuromori T, Mizukado S, Sakurai T, Kanahara H, Seki M, Shinozaki K (2002) A new resource of locally transposed Dissociation elements for screening gene-knockout lines in silico on the Arabidopsis genome. Plant Physiol 129:1695–1699
Jones JDG, Gilbert DE, Grady KL, Jorgenson RA (1987) T-DNA structure and gene expression in petunia plants transformed by Agrobacterium C58 derivatives. Mol Gen Genet 207:478–485
Jorgensen R, Snyder C, Jones JDG (1987) T-DNA is organized predominantly in inverted repeat structures in plants transformed with Agrobacterium tumefaciens C58 derivatives. Mol Gen Genet 207:471–477
Kohli A, Twyman RM, Abranches R, Wegel E, Stoger E, Christou P (2003) Transgene integration, organization, and interaction in plants. Plant Mol Biol 52:247–258
Koprek T, McElroy D, Louwerse J, Williams-Carrier R, Lemaux PG (2000) An efficient method for dispersing Ds elements in the barley genome as a tool for determining gene function. Plant J 24:253–263
Koprek T, Rangel S, McElroy D, Louwerse JD, Williams-Carrier RE, Lemaux PG (2001) Transposon-mediated single-copy gene delivery leads to increased transgene expression stability in barley. Plant Physiol 125:1354–1362
Krens FA, Mans RMW, van Slogteren TMS, Hoge JHC, Wullems GJ, Shilperoort RA (1985) Structure and expression of DNA transferred to tobacco via transformation of protoplasts with Ti-plasmid DNA: co-transfer of T-DNA and non T-DNA sequences. Plant Mol Biol 5:223–234
Kumpatla SP, Hall TC (1998) Recurrent onset of epigenetic silencing in rice harboring a multi-copy transgene. Plant J 14:129–135
Lange M, Vincze E, Møller MG, Holm PB (2006) Molecular analysis of transgene and vector backbone integration into the barley genome following Agrobacterium-mediated transformation. Plant Cell Rep 25:815–820
Lebel EG, Masson H, Bogucki A, Paszkoski J (1995) Transposable elements as plant transformation vectors for long stretches of foreign DNA. Theor Appl Genet 91:899–906
Li C, Wei J, Lin Y, Chen H (2012) Gene silencing using the recessive rice bacterial blight resistance gene cxa13 as a new paradigm in plant breeding. Plant Cell Rep 31:851–862
Lu Y, Gan Q, Chi X, Qin S (2008) Roles of microRNA in plant defense and virus offense interaction. Plant Cell Rep 27:1571–1579
Makarevitch I, Svitashev SK, Somers DA (2003) Complete sequence analysis of transgene loci from plants transformed via microprojectile bombardment. Plant Mol Biol 52:421–432
Meissner R, Chague V, Zhu Q, Emmanuel E, Elkind Y, Levy AA (2000) A high throughput system for transposon tagging and promoter trapping in tomato. Plant J 22:265–274
Meng L, Bregitzer P, Zhang S, Lemaux PG (2003) Methylation of the exon/intron region in the Ubi1 promoter complex correlates with transgene silencing in barley. Plant Mol Biol 53:327–340
Meng L, Ziv M, Lemaux PG (2006) Nature of stress and transgene locus influences transgene expression stability in barley. Plant Mol Biol 62:15–28
Morino K, Olsen OA, Shimamoto K (1999) Silencing of an aleurone-specific gene in transgenic rice is caused by a rearranged transgene. Plant J 17:275–285
Müller E, Lörz H, Lütticke S (1996) Variability of transgene expression in clonal cell lines of wheat. Plant Sci 114:71–82
Niu JH, Jian H, Xu JM, Guo YD, Liu Q (2010) RNAi technology extends its reach: engineering plant resistance against harmful eukaryotes. Afr J Biotech 9:7573–7582
Paddison PJ, Caudy AA, Hannon GJ (2002) Stable suppression of gene expression by RNAi in mammalian cells. Proc Natl Acad Sci U S A 99:1443–1448
Schumann U, Ayliffe M, Kazan K, Wang M (2010) RNA silencing in fungi. Front Biol 5:478–494
Singh J, Zhang S, Chen C, Cooper L, Bregitzer P, Sturbaum A, Hayes P, Lemaux PG (2006) High-frequency Ds remobilization over multiple generations in barley facilitates gene tagging in large genome cereals. Plant Mol Biol 62:937–950
Somers DA, Makarevitch I (2004) Transgene integration in plants: poking or patching holes in promiscuous genomes. Curr Opin Biotechnol 15:126–131
Stoutjesdijk PA, Singh SP, Liu Q, Hurlstone CJ, Waterhouse PA, Green AG (2002) hpRNA-mediated targeting of the Arabidopsis FAD2 gene gives highly efficient and stable silencing. Plant Physiol 129:1723–1731
Takano M, Egawa H, Ikeda JE, Wakasa K (1997) The structures of integration sites in transgenic rice. Plant J 11:353–361
Travella S, Ross SM, Harden J, Everett C, Snape JW, Harwood WA (2005) A comparison of transgenic barley lines produced by particle bombardment and Agrobacterium-mediated techniques. Plant Cell Rep 23:780–789
Upadhyaya NM, Zhu Q-H, Zhou X-R, Eamens AL, Hoque MS, Ramm K, Shivakkumar R, Smith KF, Pan S-T, Li S, Peng K, Kim SJ, Dennis ES (2006) Dissociation (Ds) constructs, mapped Ds launch pads and a transiently-expressed transposase system suitable for localized insertional mutagenesis in rice. Theor Appl Genet 112:1326–1341
Wang M, Waterhouse PM (2000) High-efficiency silencing of a β-glucuronidase gene in rice is correlated with repetitive transgene structure but is independent of DNA methylation. Plant Mol Biol 43:67–82
Warthmann N, Chen H, Ossowski S, Weigel D, Hervé P (2008) Highly specific gene silencing by artificial miRNAs in rice. PLoS One 3:e1829. doi:10.1371/journal.pone.0001829
Waterhouse PM, Graham MW, Wang M (1998) Virus resistance and gene silencing in plants can be induced by simultaneous expression of sense and antisense RNA. Proc Natl Acad Sci U S A 95:13959–13964
Wesley SV, Helliwell CA, Smith NA, Wang M, Rouse DT, Liu Q, Gooding PS, Singh SP, Abbott D, Stoutjesdijk PA, Robinson SP, Gleave AP, Green AG, Waterhouse PM (2001) Construct design for efficient, effective, and high-throughput gene silencing in plants. Plant J 27:581–590
Zhang S, Warkentin D, Sun B, Zhong H, Sticklen M (1996) Variation in the inheritance of expression among subclones for unselected (uidA) and selected (bar) transgenes in maize (Zea mays L.). Theor Appl Genet 92:752–761
Zhao T, Palotta M, Langridge P, Prasad M, Graner A, Schulze-Lefert P, Koprek T (2006) Mapped Ds/T-DNA launch pads for functional genomics in barley. Plant J 47:811–826
Acknowledgments
This work was funded by the USDA-ARS CRIS project 5366-21000-028. The USDA-ARS is an equal opportunity employer.
Author information
Authors and Affiliations
Corresponding author
Additional information
Editor: Todd Jones
Rights and permissions
About this article
Cite this article
Bregitzer, P., Brown, R.H. Long-term assessment of transgene behavior in barley: Ds-mediated delivery of bar results in robust, stable, and heritable expression. In Vitro Cell.Dev.Biol.-Plant 49, 231–239 (2013). https://doi.org/10.1007/s11627-013-9507-y
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s11627-013-9507-y