Skip to main content
Log in

Synthesis, crystal structure of new linear trinuclear isovalence Co(II)([Co3(H–L)2(L)2]), and visualizing intermolecular interactions with Hirshfeld surface method

  • Original Research
  • Published:
Structural Chemistry Aims and scope Submit manuscript

Abstract

S-allyl-β-N-[(2-hydroxyphenyl)methylene]hyrazinecarbodithioate) (1, H2L), the Schiff base of dithiocarbazate with unsaturated allyl substitution, can act as a new tridentate SNO ligand H2–L and react with cobalt(II) nitrate hexahydrate to form the novel linear trinuclear isovalence Co(II) complex, [Co3(H–L)2(L)2] 2C2H5OH (2). The compounds were characterized by elemental analysis, infrared, and ultraviolet spectroscopy. Compound 2 was also characterized by single-crystal X-ray analysis and crystallizes in the orthorhombic space group, Pbcn, with a = 30.643(1) Å, b = 9.118(4) Å, c = 19.017(7) Å, α = β γ = 90°, V = 5312.95 Å3, Z = 4, and R 1 = 0.0790, (wR 2) = 0.1223. The six-coordinate central Co(II) atom is bonded to two deprotonated metal-containing ligands. The terminal Co(II) atoms are in a square planar SNON four-coordinate environment and connected to the central Co(II) by N-atoms from the ligand backbone. For quantifying the intermolecular interactions in crystal lattice, the new d norm surface and the breakdown of fingerprint plots have been used for visualizing and exploring the compound 2.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6
Fig. 7

Similar content being viewed by others

References

  1. Mandal D, Mikuriya M, Fun H-K, Ray D (2007) Inorg Chem Commun 10:657. doi:10.1016/j.inoche.2007.02.026

    Article  CAS  Google Scholar 

  2. Clérac R, Cotton FA, Dunbar KR, Lu T, Murillo CA, Wang X (2000) Inorg Chem 39:3065. doi:10.1021/ic000042o

    Article  Google Scholar 

  3. Pantazis DA, McGrady JE (2006) J Am Chem Soc 128:4128. doi:10.1021/ja0581402

    Article  CAS  Google Scholar 

  4. Ebihara M, Iiba M, Matsuoka H, Okuda C, Kawamura T (2004) J Organomet Chem 689:146. doi:10.1016/j.jorganchem.2003.09.042

    Article  CAS  Google Scholar 

  5. Yazdanbakhsh M, Alizadeh MH, Zare Khorramdel H, Frank W (2007) Z Anorg Allg Chem 633:1193. doi:10.1002/zaac.200700090

    Article  CAS  Google Scholar 

  6. Clérac R, Cotton FA, Jeffery SP, Murillo CA, Wang X (2001) Inorg Chem 40:1265. doi:10.1021/ic001069a

    Article  Google Scholar 

  7. Sharma R, Sharma RP, Bala R, Quirós M, Salas JM (2006) Inorg Chem Commun 9:782. doi:10.1016/j.inoche.2006.04.001

    Article  CAS  Google Scholar 

  8. Xu X, Lu Y, Wang E, Ma Y, Guo Y, Bai X et al (2005) Mol Struct 779:55. doi:10.1016/j.molstruc.2005.06.036

    Article  CAS  Google Scholar 

  9. Huang Y-Q, Ding B, Gao H-L, Cheng P, Liao D-Z, Yan S-P et al (2005) Mol Struct 743:201. doi:10.1016/j.molstruc.2005.03.010

    Article  CAS  Google Scholar 

  10. Yazdanbakhsh M, Hakimi M, Heravi MM, Boese R (2006) Z Anorg Allg Chem 632:2201

    Google Scholar 

  11. Yazdanbakhsh M, Hakimi M, Heravi MM, Ghassemzadeh M, Neumüller B (2005) Z Anorg Allg Chem 631:924

    Article  CAS  Google Scholar 

  12. Yazdanbakhsh M, Hakimi M, Heravi MM, Ghassemzadeh M, Neumüller B (2004) Z Anorg Allg Chem 630:627

    Article  CAS  Google Scholar 

  13. Yazdanbakhsh M, Hakimi M, Heravi MM, Ghassemzadeh M, Neumüller B (2002) Z Anorg Allg Chem 628:1899. doi:10.1002/1521-3749(200208)628:8<1899::AID-ZAAC1899>3.0.CO;2-F

    Google Scholar 

  14. Ali MA, Bose R (1977) J Inorg Nucl Chem 39:265. doi:10.1016/0022-1902(77)80011-0

    Article  CAS  Google Scholar 

  15. Rakha TH (2000) Synth React Inorg Met Org Chem 30:205

    CAS  Google Scholar 

  16. Chen X, Femia FJ, Babich JW, Zubieta J (2000) Inorg Chim Acta 307:154. doi:10.1016/S0020-1693(00)00193-6

    Article  CAS  Google Scholar 

  17. Nigam S, Patel MM, Ray A (2000) J Phys Chem Solids 61:1389. doi:10.1016/S0022-3697(00)00025-1

    Article  CAS  Google Scholar 

  18. John RP, Sreekanth A, Kurup MRP, Mobin MS (2002) Polyhedron 21:2515. doi:10.1016/S0277-5387(02)01227-5

    Article  CAS  Google Scholar 

  19. Sau DK, Butcher RJ, Chaudhuri S, Saha N (2004) Polyhedron 23:5. doi:10.1016/j.poly.2003.09.007

    Article  CAS  Google Scholar 

  20. Frausto da Silva JJR, Williams RJP (1991) The biological chemistry of the elements. Clarendon Press, Oxford

    Google Scholar 

  21. Kaim W, Schwederski B (1996) Bioinorganic chemistry: inorganic elements in the chemistry of life. Wiley, New York

    Google Scholar 

  22. Coughlin PK, Lippard SJ (1984) J Am Chem Soc 106:2328. doi:10.1021/ja00320a018

    Article  CAS  Google Scholar 

  23. Lindoy LY (1989) The chemistry of microcuelic liquids. Cambridge University Press, Cambridge

    Google Scholar 

  24. Rajabi F, Karimi B (2005) J Mol Catal A Chem 232:95

    Article  CAS  Google Scholar 

  25. Lv J, Liu T, Cai S, Wang X, Liu L, Wang Y (2006) J Inorg Biochem 100:1888. doi:10.1016/j.jinorgbio.2006.07.014

    Article  CAS  Google Scholar 

  26. Pui A, Mahy J-P (2007) Polyhedron 26:3143. doi:10.1016/j.poly.2007.02.030

    Article  CAS  Google Scholar 

  27. Moriguchi T, Matsuura H, Kodera Y, Itakura Y, Katsuki H, Saito H et al (1997) Neurochem Res 22:1449. doi:10.1023/A:1021946210399

    Article  CAS  Google Scholar 

  28. Ferrari MB, Capacchi S, Bisceglie F, Pelosi G, Tarasconi P (2001) Inorg Chim Acta 312:81. doi:10.1016/S0020-1693(00)00339-X

    Article  CAS  Google Scholar 

  29. Yazdanbakhsh M, Heravi MM, Takjoo R, Frank W (2008) Z Anorg Allg Chem 634:972

    Article  CAS  Google Scholar 

  30. Spackman MA, Byrom PG (1997) Chem Phys Lett 267:215. doi:10.1016/S0009-2614(97)00100-0

    Article  CAS  Google Scholar 

  31. McKinnon JJ, Mitchell AS, Spackman MA (1998) Chem Eur J 4:2136. doi:10.1002/(SICI)1521-3765(19981102)4:11<2136::AID-CHEM2136>3.0.CO;2-G

    Article  CAS  Google Scholar 

  32. http://www.theochem.uwa.edu.au/CrystalExplorer

  33. Bruker (2005) APEX2 software package. Bruker AXS Inc., 5465, East Cheryl Parkway, Madison, WI 5317

  34. Sheldrick GM (1998) SHELXTL v. 5.10, structure determination software suit. Bruker AXS, Madison

    Google Scholar 

  35. Ali MA, Mirza AH, Voo CW, Tan AL, Bernhardt PV (2003) Polyhedron 22:3433. doi:10.1016/j.poly.2003.08.004

    Article  Google Scholar 

  36. Ali MA, Mirza AH, Nazimuddin M, Rahman H, Butcher RJ (2001) Polyhedron 20:2431. doi:10.1016/S0277-5387(01)00764-1

    Article  Google Scholar 

  37. Dutta SK, Samanta S, Mukhopadhyay S, Burckel P, Pinkerton AA, Chaudhury M (2002) Inorg Chem 41:2946. doi:10.1021/ic011311t

    Article  CAS  Google Scholar 

  38. Pramanik NP, Ghosh S, Raychaudhuri TK, Ray S, Butcher RJ, Mandal SS (2004) Polyhedron 23:1595. doi:10.1016/j.poly.2004.03.010

    Article  CAS  Google Scholar 

  39. Ali MA, Mirza AH, Butcher RJ, Tarafder MTH, Ali AM (2001) Inorg Chim Acta 320:1. doi:10.1016/S0020-1693(01)00452-2

    Article  Google Scholar 

  40. Ketcham KA, Garcia I, Swearingen JK, El-Sawaf AK, Bermejo E, Castiñeiras A, West DX (2002) Polyhedron 21:859. doi:10.1016/S0277-5387(02)00853-7

  41. Chew K-B, Tarafder MTH, Crouse KA, Ali AM, Yamin BM, Fun H-K (2004) Polyhedron 23:1385. doi:10.1016/j.poly.2004.02.018

    Article  CAS  Google Scholar 

  42. McKinnon JJ, Jayatilaka D, Spackman MA (2007) Chem Commun 1

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Mohammad Yazdanbakhsh.

Electronic supplementary material

Below is the link to the electronic supplementary material.

[MOESM1] (PDF 58 kb)

Rights and permissions

Reprints and permissions

About this article

Cite this article

Yazdanbakhsh, M., Takjoo, R. Synthesis, crystal structure of new linear trinuclear isovalence Co(II)([Co3(H–L)2(L)2]), and visualizing intermolecular interactions with Hirshfeld surface method. Struct Chem 19, 895–903 (2008). https://doi.org/10.1007/s11224-008-9356-1

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s11224-008-9356-1

Keywords

Navigation