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Expression of an NADP-malic enzyme gene in rice (Oryza sativa. L) is induced by environmental stresses; over-expression of the gene in Arabidopsis confers salt and osmotic stress tolerance

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Abstract

NADP-malic enzyme (NADP-ME, EC 1.1.1.40) functions in many different pathways in plants, and has recently been implicated in plant defense such as in responses to wounding and UV-B radiation. In this study, we isolated a complementary DNA (cDNA) clone by using the differential display method and screening of a root cDNA library of rice (Oryza sativa. L) under carbonate (NaHCO3) stress, and identified it as one of the rice NADP-ME genes (we named it NADP-ME 2 , GenBank accession no. AB053295). The 5′ end of NADP-ME 2 was obtained by the 5′-RACE method, and the full-length cDNA had a length of 2217 bp encoding 593 amino acids. Expression of NADP-ME 2 mRNA in roots was induced by stress from carbonates (NaHCO3 and Na2CO3), NaCl, and environmental pH changes. NADP-ME 2 transcripts increased during 72-h exposures to NaHCO3, NaCl, and PEG stresses. Furthermore, NADP-ME activities in leaves and roots of rice seedlings increased by more than 50% in the presence of carbonates (NaHCO3 and Na2CO3), NaCl, and PEG. These results indicate that rice NADP-ME 2 responds to salts and osmotic stresses. Transgenic Arabidopsis plants over-expressing NADP-ME 2 were obtained through transformation, screening, Northern analysis and in situ NADP-ME activity assay. Transgenic Arabidopsis plants over-expressing NADP-ME 2 grew well in 1/2 × MS medium with 100 mM NaCl or 4% mannitol, whereas growth of wild-type (WT) Arabidopsis seedlings was strongly inhibited. In addition, under 125 mM NaCl stress, the root lengths of transgenic lines were about twice as long as those of the WT. These results suggest that NADP-ME 2 has a role in enhancing tolerance of plants to salt and osmotic stress.

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Abbreviations

CAM:

Crassulacean acid metabolism

CaMV35S:

Cauliflower mosaic virus 35S

cDNA:

Complementary DNA

DIG:

Digoxigenin

E. coli :

Escherichia coli

ME:

Malic enzyme

NADP-ME:

NADP-malic enzyme

NBT/BCIP:

5-bromo-4-chloro-3-indoxyl phosphate/nitroblue tetrazolium chloride

ORF:

Open reading frame

PEG6000:

Polyethylene glycol 6000

PEPCase:

Phosphoenolpyruvate carboxylase

PMSF:

Phenylmethylsulfonyl fluoride

ROS:

Reactive oxygen species

RT-PCR:

Reverse transcription polymerase chain reaction

WT:

Wild-type

References

  • Alhendaw RA, Romheld V, Kirkby E, Marschner H (1997) Influence of increasing bicarbonate concentration on plant growth, organic acid accumulation in roots and iron uptake by barley, sorghum, and maize. J Plant Nutr 20:1731–1753

    Google Scholar 

  • Bechtold N, Pelletier G (1998) In planta Agrobacterium-mediated transformation of adult Arabidopsis thaliana plants by vacuum infiltration. Methods Mol Biol 82:259–266

    PubMed  CAS  Google Scholar 

  • Boo YC, Jung J (1999) Water deficit-induced oxidative stress and antioxidative defenses in rice plants. J Plant Physiol 155:255–261

    CAS  Google Scholar 

  • Casati P, Andreo CS (2001) UV-B and UV-C induction of NADP-malic enzyme in tissues of different cultivars of Phaseolus vulgaris (bean). Plant Cell Environ 24:621–630

    Article  CAS  Google Scholar 

  • Casati P, Drincovich MF, Andreo CS, Donahue R, Edwards G (1998) UV-B, red and far-red light regulate induction of the C4 isoform of NADP-malic enzyme in etiolated maize seedlings. Aust J Plant Physiol 25:701–708

    Article  CAS  Google Scholar 

  • Casati P, Drincovich MF, Edwards GE, Andreo CS (1999) Malate metabolism by NADP-malic enzyme in plant defense. Photosynth Res 61:99–105

    Article  CAS  Google Scholar 

  • Casati P, Lara MV, Andreo CS (2002) Regulation of enzymes involved in C4 photosynthesis and the antioxidant metabolism by UV-B radiation in Egeria densa, a submersed aquatic species. Photosynth Res 71:251–264

    Article  PubMed  CAS  Google Scholar 

  • Chang GG, Tong L (2003) Structure and function of malic enzymes, a new class of oxidative decarboxylases. Biochemistry 42:12721–12733

    Article  PubMed  CAS  Google Scholar 

  • Cheng Y, Takano T, Zhang X, Yu S, Liu D, Liu S (2006) Expression, purification, and characterization of two NADP-malic enzymes of rice (Oryza sativa L.) in Escherichia coli. Protein Expr Purif 45:200–205

    Article  PubMed  CAS  Google Scholar 

  • Chi W, Yang JH, Wu NH, Zhang F (2004) Four rice genes encoding NADP-ME exhibit distinct expression profiles. Biosci Biotechnol Biochem 68:1865–1874

    Article  PubMed  CAS  Google Scholar 

  • Cushman JC (1992) Characterization and expression of a NADP-malic enzyme cDNA induced by salt stress from the facultative crassulacean acid metabolism plant, Mesembryanthemum crystallium. Eur J Biochem 208:259–266

    Article  PubMed  CAS  Google Scholar 

  • Davies DD (1986) The fine control of cytosolic pH. Physiol Plant 67:702–706

    Article  CAS  Google Scholar 

  • Dat J, Vandenabeele S, Vranova E, Van Montagu M, Inze D, Van Breusegem F (2000) Dual action of the active oxygen species during plant stress responses. Cell Mol Life Sci 57:779–795

    Article  PubMed  CAS  Google Scholar 

  • Drincovich MF, Casati P, Andreo CS (2001) NADP-malic enzyme from plants: a ubiquitous enzyme involved in different metabolic pathways. FEBS Lett 490:1–6

    Article  PubMed  CAS  Google Scholar 

  • Drincovich MF, Casati P, Andreo CS, Donahue R, Edwards G (1998) UV-B induction of NADP-malic enzyme in etiolated and green maize seedlings. Plant Cell Environ 21:63–70

    Article  CAS  Google Scholar 

  • Eastmond PL, Dennis DT, Rawsthorne S (1997) Evidence that a malate/inorganic phosphate exchange translocator imports carbon across the leucoplast envelope for fatty acid synthesis in developing castor seed endosperm. Plant Physiol 114:851–856

    PubMed  CAS  Google Scholar 

  • Edwards GE, Andreo CS (1992) NADP-malic enzyme from plants. Phytochemistry 31:1845–1857

    Article  PubMed  CAS  Google Scholar 

  • Felle HH (2001) pH: signal and messenger in plant cells. Plant Biol 3:577–591

    Article  CAS  Google Scholar 

  • Franke KE, Adams DO (1995) Cloning of a full-Length cDNA for malic enzyme (EC 1.1.1.40) from Grape Berries. Plant Physiol 107:1009–1010

    Article  PubMed  CAS  Google Scholar 

  • Fushimi T, Umeda M, Shimazaki T, Kato A, Toriyama K, Uchimiya H (1994) Nucleotide sequence of a rice cDNA similar to a maize NADP-dependent malic enzyme. Plant Mol Biol 24:965–967

    Article  PubMed  CAS  Google Scholar 

  • Hasegawa PM, Bressan RA, Zhu JK, Bohnert HJ (2000) Plant cellular and molecular responses to high salinity. Annu Rev Plant Mol Plant Physiol 51:463–499

    Article  CAS  Google Scholar 

  • Honda H, Akagi H, Shimada H (2000) An isozyme of the NADP-malic enzyme of a CAM plant, Aloe arborescens, with variation on conservative amino acid residues. Gene 243:85–92

    Article  PubMed  CAS  Google Scholar 

  • Kurkdjian A, Guern G (1989) Intracellular pH: measurement and importance in cell activity. Annu Rev Plant Physiol Plant Mol Biol 40:271–303

    Article  CAS  Google Scholar 

  • Lai LB, Wang L, Nelson TM (2002a) Distinct but conserved functions for two chloroplastic NADP-malic enzyme isoforms in C3 and C4 Flaveria species. Plant Physiol 128:125–139

    Article  CAS  Google Scholar 

  • Lai LB, Tausta SL, Nelson TM (2002b) Differential regulation of transcripts encoding cytosolic NADP-malic enzyme in C3 and C4 Flaveria species. Plant Physiol 128:140–149

    Article  CAS  Google Scholar 

  • Laporte MM, Shen B, Tarczynski MC (2002) Engineering for drought avoidance: expression of maize NADP-malic enzyme in tobacco results in altered stomatal function. J Exp Bot 53:699–705

    Article  PubMed  CAS  Google Scholar 

  • Lin CC, Kao CH (2000) Effect of NaCl stress on H2O2 metabolism in rice leaves. Plant Growth Regul 30:151–155

    Article  CAS  Google Scholar 

  • Liu D, Zhang X, Cheng Y, Takano T, Liu S (2006) rHsp90 gene is in response to several environmental stresses in rice (Oryza sativa L.). Plant Physiol Biochem 44:380–386

    Article  PubMed  CAS  Google Scholar 

  • Loggini B, Scartazza A, Brugnoli E, Navari-Izzo F (1999) Antioxidative defense system, pigment composition, and photosynthetic efficiency in two wheat cultivars subjected to drought. Plant Physiol 119:1091–1099

    Article  PubMed  CAS  Google Scholar 

  • Martinoia E, Rentsch D (1994) Malate compartmentation: responses to a complex metabolism. Annu Rev Plant Physiol Plant Mol Biol 45:447–467

    CAS  Google Scholar 

  • Maurino VG, Drincovich MF, Casati P, Andreo CS, Ku MSB, Gupta SK, Edwards GE, Franceschi VR (1997) NADP-malic enzyme: immunolocalization in different tissues of the C4 plant maize and the C3 plant wheat. J Exp Bot 48:799–811

    Article  CAS  Google Scholar 

  • Minard KI, McAlister-Henn L (2001) Antioxidant function of cytosolic sources of NADPH in yeast. Free Radic Biol Med 31:832–843

    Article  PubMed  CAS  Google Scholar 

  • Mittler R (2002) Oxidative stress, antioxidants and stress tolerance. Trends Plant Sci 7:405–410

    Article  PubMed  CAS  Google Scholar 

  • Møller IM (2001) Plant mitochondria and oxidative stress: electron transport, NADPH turnover, and metabolism of reactive oxygen species. Annu Rev Plant Physiol Plant Mol Biol 52:561–591

    Article  PubMed  Google Scholar 

  • Møller IM, Rasmusson AG (1998) The role of NADP in the mitochondrial matrix. Trends Plant Sci 3:21–27

    Article  Google Scholar 

  • Murashige T, Skoog F (1962) A revised medium for rapid growth and bioassay with tobacco tissue cultures. Physiol Plant 15:473–497

    Article  CAS  Google Scholar 

  • Pinto ME, Casati P, Hsu TP, Ku MSB, Edwards GE (1999) Effects of UV-B radiation on growth, photosynthesis, UV-B-absorbing compounds and NADP-malic enzyme in bean (Phaseolus vulgaris. L) grown under different nitrogen conditions. J Photochem Photobiol B Biol 48:200–209

    Article  CAS  Google Scholar 

  • Rothemel BA, Nelson T (1989) Primary structure of maize NADP-dependent malic enzyme. J Biol Chem 264:19587–19592

    Google Scholar 

  • Sakano K (1998) Revision of biochemical pH-stat: involvement of alternative pathway metabolisms. Plant Cell Physiol 39:467–473

    CAS  Google Scholar 

  • Schaaf J, Walter MH, Hess D (1995) Primary metabolism in plant defense: regulation of a bean malic enzyme gene promoter in transgenic tobacco by developmental and environmental cues. Plant Physiol 108:949–960

    PubMed  CAS  Google Scholar 

  • Shearer HL, Turpin DH, Dennis DT (2004) Characterization of NADP-dependent malic enzyme from developing castor oil seed endosperm. Arch Biochem Biophys 429:134–144

    Article  PubMed  CAS  Google Scholar 

  • Smirnoff N (1998) Plant resistance to environmental stress. Curr Opin Biotechnol 9:214–219

    Article  PubMed  CAS  Google Scholar 

  • Smith RG, Gauthier DA, Dennis DT, Turpin DH (1992) Malate and pyruvate-dependent fatty acid synthesis in leucoplasts from developing castor endosperm. Plant Physiol 98:1233–1238

    Article  PubMed  CAS  Google Scholar 

  • Song C-P, Guo Y, Qiu QS, Lambert G, Galbraith DW, Jagendorf A, Zhu J-K (2004) A probable Na+ (K+)/H+ exchanger on the chloroplast envelope functions in pH homeostasis and chloroplast development in Arabidopsis thaliana. PNAS 101:10211–10216

    Article  PubMed  CAS  Google Scholar 

  • Sun SB, Shen QR, Wang JM, Liu ZP (2003) Induced expression of the gene for NADP-malic enzyme in leaves of Aloe vera L under salt stress. Acta Biochim Biophys Sin 35:423–429

    PubMed  CAS  Google Scholar 

  • Verkoczy LK (1998) Isolation of genes negatively or positively co-expressed with human recombination activating gene 1 (RAG1) by differential display PCR (DD RT-PCR). Nucleic Acids Res 26:4497–4507

    Article  PubMed  CAS  Google Scholar 

  • Wang ZQ, Zhu SQ, Yu RP, Li LQ, Shan GZ (1993) The Saline-alkali soil of China. The Science Press, Beijing, China

    Google Scholar 

  • Walter MH, Grima-Pettenati J, Feuillet C (1994) Characterization of a bean (Phaseolus vulgaris L.) malic-enzyme gene. Eur J Biochem 224:999–1009

    Article  PubMed  CAS  Google Scholar 

  • Wellburn FAM, Lau K-K, Milling PMK, Wellburn AR (1996) Drought and air pollution affect nitrogen cycling and free radical scavenging in Pinus halepensis (Mill.). J Exp Bot 47:1361–1367

    Article  CAS  Google Scholar 

  • Wheeler MC, Tronconi MA, Drincovich MF, Andreo CS, Flugge U-I, Maurino VG (2005) A comprehensive analysis of the NADP-malic enzyme gene family of Arabidopsis. Plant Physiol 139:39–51

    Article  PubMed  CAS  Google Scholar 

  • Xiong LM, Schumaker KS, Zhu J-K (2002) Cell signaling during cold, drought, and salt stress. Plant Cell 14:S165–S183

    Article  PubMed  CAS  Google Scholar 

  • Zhang X, Takano T, Liu S (2006) Identification of a mitochondrial ATP synthase small subunit gene (RMtATP6) expressed in response to salts and osmotic stresses in rice (Oryza sativa L.). J Exp Bot 57:193–200

    Article  PubMed  CAS  Google Scholar 

Download references

Acknowledgements

This work was supported by a Grant-in-aid for Scientific Research (18658001) and by a grant from Heiwa Nakajima Foundation to T.T. This work was also supported by the National High Technology Research and Development Program (863 Program, 2002AA241111) from the People’s Republic of China to S.K.L and Hei Long Jiang Province Natural Science Foundation Project (C200518) to Y.X.C.

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Correspondence to Tetsuo Takano.

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Liu, S., Cheng, Y., Zhang, X. et al. Expression of an NADP-malic enzyme gene in rice (Oryza sativa. L) is induced by environmental stresses; over-expression of the gene in Arabidopsis confers salt and osmotic stress tolerance. Plant Mol Biol 64, 49–58 (2007). https://doi.org/10.1007/s11103-007-9133-3

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