Abstract
Cabbage Fusarium wilt (CFW) is a destructive disease causing great losses to cabbage (Brassica oleracea L. var. capitata L.) production worldwide. At present, there are few reports concerning molecular marker research on cabbage resistance to CFW. In this study, 160 double haploid (DH) lines were obtained from the F1 population of a 99–77 (highly resistant to CFW) × 99–91 (highly susceptible to CFW) cross. Insertion–deletion (InDel) markers were designed according to the reference genome sequence of cabbage and the whole-genome re-sequencing data of the two parents. A genetic map of chromosome C06 including seven InDel markers was constructed based on the DH population. Thus, FOC (resistance gene to Fusarium oxysporum f. sp. conglutinans) was located on chromosome C06 and two InDel markers out of the seven, M10 and A1, flanked the gene at 1.2 and 0.6 cM, respectively. Marker A1 revealed a significant consistency with the phenotype assay in the F2 population as well as in 40 inbred lines (96 and 82 %, respectively). This study lays the foundation for fine mapping and cloning of the FOC gene and for marker-assisted selection in cabbage resistance breeding.
Similar content being viewed by others
References
Arden S (1979) Fusarium yellows of cabbage and related crops. Vegetable Crops 730
Armstrong GM, Armstrong JK (1981) Formae speciales and races of Fusarium oxysporum causing wilt diseases. The Pennsylvania State University Press, University Park, PA, pp 391–399
Booth C (1971) The genus Fusarium. CABI Publishing, UK
Bosland PW, Willams PH (1987) Sources of resistance to Fusarium oxysporum f. sp. conglutinans, race 2. Hortscience 22(4):669–670
Diener AC, Ausubel FM (2005) Resistance to Fusarium Oxysporum 1, a dominant arabidopsis disease-resistance gene, is not race specific. Genetics 171:305–321
Farnham MW, Keinath AP, Smith JP (2001) Characterization of Fusarium yellows resistance in collard. Plant Dis 85(8):890–894
Jiang M, Zhao Y, Xie J, Tian R, Chen Y, Kang J (2011) Development of a SCAR marker for Fusarium wilt resistance in cabbage. Sci Agric Sinica 44(14):3053–3059 (in Chinese)
Keinath AP, Farnham MW, Smith P (1998) Reactions of 26 cultivars of Brassica oleracea to yellows in naturally infested soil. Biol Cult Tests 13:155
Kosambi DD (1944) The estimation of map distances from recombination values. Ann Eugen 12:172–175
Li M, Zhang T, Li X, Yan H (2003) Fusarium wilt disease on crucifer vegetable and its pathogenic identification. Plant Protect 29(6):44–45 (in Chinese)
Liu R, Meng J (2003) Map draw: a microsoft excel macro for drawing genetic linkage maps based on given genetic linkage data. Hereditas 25(3):317–321 (in Chinese)
Liu B, Wang Y, Zhai W, Deng J, Wang H, Cui Y, Cheng F, Wang X, Wu J (2013) Development of InDel markers for Brassica rapa based on whole-genome re-sequencing. Theor Appl Genet 126:231–239
Lv H, Fang Z, Yang L, Xie B, Liu Y, Zhuang M, Zhang Y, Yang Y (2011) Research on screening of resistant resources to Fusarium wilt and inheritance of the resistant gene in cabbage. Acta Horticult Sinica 38(5):875–885 (in Chinese)
Morrison RH, Mengistu A, Williams PH (1994) First report of race 2 of cabbage yellows caused by Fusarium oxysporum f. sp. conglutinans in Texas. Plant Dis 78(6):614
Murray HG, Thompson WF (1980) Rapid isolation of high molecular weight DNA. Nucleic Acids Res 8:4321–4325
Nomura Y, Kato K, Takeuchi S (1976) Studies on the method of early selection of the resistance of cabbage to the yellows disease. Jpn Center Agric Exp Rep 24:141–182 (in Japanese)
Ori N, Eshed Y, Paran I, Presting G, Aviv D, Tanksley S, Zamir D, Fluhr R (1997) The I2C family from the wilt disease resistance locus I2 belongs to the nucleotide binding, leucine-rich repeat superfamily of plant resistance genes. Plant Cell 9:521–532
Pu Z, Motoki S, Zhang Y, Tomohiko N, Takeshi H, Hidetaka H, Satoru M, Ryo F, Keiichi O (2012) Genetic mapping of a fusarium wilt resistance gene in Brassica oleracea. Mol Breeding 30:809–818
Ramirez-Villupadua J, Endo RM, Bosland P, Williams PH (1985) A new race of Fusarium oxysporum f. sp. conglutinans that attacks cabbage with type A resistance. Plant Dis 69(7):612–613
Smith EF (1899) The fungus infection of agricultural soils in the United States. Sci Am Suppl 48:19981–19982
Takahata Y, Keller WA (1991) High frequency embryogenesis and plantregeneration in isolated microspore culture of Brassica oleracea L. Plant Sci 74:235–242
Tarek J, Joseph JK, Shelly JN, Claude ET, Ralph AD (2004) The fusarium wilt resistance locus Fom-2 of melon contains a single resistance gene with complex features. Plant J 39:283–297
Väli U, Brandström M, Johansson M, Ellegren H (2008) Insertion-deletion polymorphisms (indels) as genetic markers in natural populations. BMC Genetic 9:8
Van Ooijen JW (2006) JoinMap 4, software for the calculation of genetic linkage maps in experimental populations. Kyazma BV, Wageningen
Walker JC (1930) Inheritance of Fusarium resistance in cabbage. J Agric Res 40:721–745
Walker JC, Hooker WJ (1945) Plant nutrition in relation to disease development. I. Cabbage yellows. Am J Bot 32:314–320
Zhang Y, Zheng J, Wu X, Shi Y, Gu P, Li J (2007) Investigation of occurrence and damage of cabbage wilt disease in Yanqing County of Beijing. Chin Agric Sci Bull 23(5):315–320 (in Chinese)
Zhang Y, Zheng J, Xie B, Li J, Wu X, Shi Y, Ma Y (2008) Identification on pathogen of cabbage wilt disease. Acta Phytopathol Sinaca 38(4):337–345(in Chinese)
Acknowledgments
This work has been financed as follows: Agro-scientific Research in the Public Interest (200903049-04), National ‘twelfth five’ Science and Technique Support Project (2012BAD19B00), the National Natural Science Foundation of China (31171958), the Program of Beijing Municipal Science and Technology Committee (D121100003412001), National High Technology Research and Development Program of China (863 Program, 2012AA100101; 2012AA100103), Key Projects in the National Science & Technology Pillar Program during the Twelfth Five-Year Plan Period (2012BAD02B01), and the earmarked fund for the Modern Agro-Industry Technology Research System, China (nycytx-35-gw01). This work was done in the Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (North China), Ministry of Agriculture, Beijing 100097, People’s Republic of China.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Lv, Hh., Yang, Lm., Kang, Jg. et al. Development of InDel markers linked to Fusarium wilt resistance in cabbage. Mol Breeding 32, 961–967 (2013). https://doi.org/10.1007/s11032-013-9925-x
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s11032-013-9925-x