Abstract
The environmental controls on modern peatland testate amoebae (Protozoa: Rhizopoda) in the North of Ireland were investigated to assess the potential for Holocene palaeoclimate research within this region. Canonical Correspondence Analysis (CCA) revealed that hydrological factors (water table depth and moisture content) are the most important abiotic controls on organism distribution. A series of partial CCAs showed that water table depth explains 15.8% and moisture content explains 5.5% of the total variance. Monte-Carlo permutation tests showed that the results are highly significant (p < 0.002; p < 0.040 respectively). Transfer functions were generated for water table depth using weighted averaging tolerance downweighted (WA-Tol) regression and for moisture content using weighted averaging partial least squares regression (WA-PLS). The performance of the models was assessed using leave-one-out cross-validation (jacknifing). After removal of outlier samples, the improved transfer functions were found to perform well with an r 2jack and root mean square error of predictionjack of 0.83, 4.99 cm for water table depth and 0.76, 4.60% for moisture content respectively. The water table transfer function was applied to a fossil peat sequence from this region and reconstruction errors were generated by 1,000 bootstrap cycles. The water table reconstruction was also carried out using an established pan-European transfer function and was found to be similar to that based on the North of Ireland dataset. This demonstrates the persistent and comparable control of hydrological variables on the distribution of testate amoebae taxa across Europe and implies that regional training sets can suffice as long as no-analogue situations are not encountered.
Similar content being viewed by others
Notes
The water table depths presented in this paper are expressed as positive values if they are below ground and negative values for standing water. This is to enable direct comparisons with the reconstructions from the ACCROTELM project (Charman et al. 2007; Sillasoo et al. 2007), and is opposite to what has been presented in previous work from the North of Ireland (Swindles 2006; Swindles et al. 2007a, b).
References
Barber KE, Maddy D, Rose N, Stevenson AC, Stoneman R, Thompson R (2000) Replicated proxy-climate signals over the last 2000 years from two distant UK peat bogs: new evidence for regional palaeoclimate teleconnections. Quat Sci Rev 19:481–487. doi:10.1016/S0277-3791(99)00102-X
Belyea LR (1999) A novel indicator of reducing conditions and water table depth in mires. Funct Ecol 13:431–434. doi:10.1046/j.1365-2435.1999.00333.x
Belyea LR (2007) Revealing the Emperor’s new clothes: niche-based palaeoenvironmental reconstruction in the light of recent ecological theory. Holocene 17:683–688
Betts NL (1997) Climate, soil and environment: Northern Ireland. Agricultural and Environmental Science Division, DANI and The Agricultural and Environmental Sciences Department. The Queen’s University of Belfast, Northern Ireland
Betts NL (2002) Climate change in Northern Ireland. In: Smyth A et al (eds) Implications of climate change for Northern Ireland: Informing Strategy Development. SNIFFER report, Belfast
Birks HJB (1995) Quantitative palaeoenvironmental reconstructions. In: Maddy D, Brew JS (eds) Statistical modelling of quaternary science data. Technical guide 5. Quaternary Research Association, Cambridge
Birks HJB, Line JM, Juggins S, Stevenson AC, ter Braak CJF (1990) Diatoms and pH reconstruction. Philos T R Soc B 27:263–278. doi:10.1098/rstb.1990.0062
Blundell A, Barber KE (2005) A 2800-year palaeoclimatic record from Tore Hill Moss, Strathspey, Scotland: the need for a multi-proxy approach to peat-based climate reconstructions. Quat Sci Rev 24:1261–1277. doi:10.1016/j.quascirev.2004.08.017
Blundell A, Charman DJ, Barber KE (2008) Multi-proxy late Holocene peat records from Ireland: towards a regional palaeoclimate curve. J Quat Sci 23:59–71. doi:10.1002/jqs.1115
Booth RK (2008) Testate amoebae as proxies for mean annual water-table depth in Sphagnum-dominated peatlands of North America. J Quat Sci 23:43–57. doi:10.1002/jqs.1114
Booth RK, Jackson ST (2003) A high-resolution record of late-Holocene moisture availability from a Michigan raised bog, USA. Holocene 13:863–876. doi:10.1191/0959683603hl669rp
Booth RK, Zygmunt JR (2005) Biogeography and comparative ecology of testate amoebae inhabiting Sphagnum-dominated peatlands in the Great Lakes and Rocky Mountain regions of North America. Divers Distrib 11:577–590. doi:10.1111/j.1366-9516.2005.00154.x
Booth RK, Hotchkiss SC, Wilcox DA (2005) Discoloration of polyvinyl chloride (PVC) tape as a proxy for water-table depth in peatlands: validation and assessment of seasonal variability. Funct Ecol 19:1040–1047. doi:10.1111/j.1365-2435.2005.01048.x
Borcard D, Legendre P, Drapeau P (1992) Partialling out the spatial component of ecological variation. Ecology 73:1045–1055. doi:10.2307/1940179
Charman DJ (1997) Modelling hydrological relationships of testate amoebae (Protozoa: Rhizopoda) on New Zealand peatlands. J R Soc N Z 24:465–483
Charman DJ (2001) Biostratigraphic and palaeoenvironmental applications of testate amoebae. Quat Sci Rev 20:1753–1764. doi:10.1016/S0277-3791(01)00036-1
Charman DJ (2002) Peatlands and environmental change. Wiley, Chichester
Charman DJ (2007) Summer water deficit variability controls on peatland water-table changes: implications for Holocene palaeoclimate reconstructions. Holocene 17:217–227. doi:10.1177/0959683607075836
Charman DJ, Warner BG (1992) Relationship between testate amoebae (Protozoa, Rhizopoda) and microenvironmental parameters on a forested peatland in northeastern Ontario. Can J Zool 70:2474–2482. doi:10.1139/z92-331
Charman DJ, Warner BG (1997) The ecology of testate amoebae (Protozoa: Rhizopoda) in oceanic peatlands in Newfoundland, Canada: modelling hydrological relationships for palaeoenvironmental reconstruction. Ecoscience 4:555–562
Charman DJ, Hendon D, Woodland WA (2000) The identification of testate amoebae (Protozoa: Rhizopoda) in peats. Technical guide no. 9. Quaternary Research Association, London
Charman DJ, Brown AD, Hendon D, Karofeld E (2004) Testing the relationship between Holocene peatland palaeoclimatic reconstructions and instrumental meteorological data. Quat Sci Rev 23:137–143. doi:10.1016/j.quascirev.2003.10.006
Charman DJ, Blundell A, Chiverrell RC, Hendon D, Langdon PG (2006) Compilation of non-annually resolved Holocene proxy climate records: stacked Holocene peatland palaeo-water table reconstructions from northern Britain. Quat Sci Rev 25:336–350. doi:10.1016/j.quascirev.2005.05.005
Charman DJ, Blundell A, ACCROTELM Members (2007) A new European testate amoebae transfer function for palaeohydrological reconstruction on ombrotrophic peatlands. J Quat Sci 22:209–221. doi:10.1002/jqs.1026
Clarke KR (1993) Non-parametric multivariate analyses of changes in community structure. Aust J Ecol 18:117–143. doi:10.1111/j.1442-9993.1993.tb00438.x
Dale B, Dale AL (2002) Application of ecologically based statistical treatments to micropalaeontology. In: Haslett SK (ed) Quaternary environmental micropalaeontology. Arnold, London
Double KWW (1954) A survey of the peat resources of Northern Ireland. M.Sc. Thesis, Queen’s University, Belfast, Northern Ireland
Fishbein E, Patterson RT (1993) Error-weighed maximum likelihood (EWML): a new statistically based method to cluster quantitative micropaleontological data. J Paleontol 67:475–485
Hall VA, Pilcher JR (2002) Late Quaternary Icelandic tephras in Ireland and Great Britain: detection, characterization and usefulness. Holocene 12:223–230
Hendon D, Charman DJ (1997) The preparation of testate amoebae (Protozoa: Rhizopoda) samples from peat. Holocene 7:199–205. doi:10.1177/095968369700700207
Jowsey PC (1966) An improved peat sampler. New Phytol 65:245–248. doi:10.1111/j.1469-8137.1966.tb06356.x
Juggins S (2003) C2 user guide. Software for ecological and palaeoecological data analysis and visualisation. University of Newcastle, Newcastle Upon Tyne
Kruskal JB (1964) Nonmetric multidimensional scaling: a numerical method. Psychometrika 29:115–129. doi:10.1007/BF02289694
Lamentowicz M, Mitchell EAD (2005) Testate amoebae (protists) as palaeoenvironmental indicators in peatlands. Pol Geol Inst Spec Pap 16:58–64
Line JM, ter Braak CJF, Birks HJB (1994) WACALIB version 3.3: a computer program to reconstruct environmental variables from fossil assemblages by weighted-averaging and to derive sample-specific errors of prediction. J Paleolimnol 10:147–152. doi:10.1007/BF00682511
Mauquoy D, Yeloff D, van Geel B, Charman DJ, Blundell A (2008) Two decadally-resolved records from northwest European peat bogs show rapid climate changes associated with solar variability during the mid-late Holocene. J Quat Sci. doi:10.1002/jqs.1158
McCune B, Grace JB (2002) Analysis of ecological communities. MjM Software, Gleneden Beach. OR 300
Mitchell EAD, Warner BG, Buttler AJ, Gobat JM (1999) Ecology of testate amoebae (Protozoa: Rhizopoda) in Sphagnum peatlands in the Jura mountains, Switzerland and France. Ecoscience 6:565–576
Mitchell EAD, Payne RJ, Lamentowicz M (2008) Potential implications of differential preservation of testate amoebae shells for paleoenvironmental reconstruction in peatlands. J Paleolimnol 40:603–618. doi:10.1007/s10933-007-9185-z
Payne RJ, Mitchell EAD (2007) Ecology of testate amoebae from mires in the Central Rhodope Mountains, Greece and development of a transfer function for palaeohydrological reconstruction. Protist 158:159–171. doi:10.1016/j.protis.2006.11.003
Payne RJ, Kishaba K, Blackford JJ, Mitchell EAD (2006) Ecology of testate amoebae (Protista) in south-central Alaska peatlands: building transfer-function models for palaeoenvironmental studies. Holocene 16:403–414. doi:10.1191/0959683606hl936rp
Payne RJ, Charman DJ, Matthews S, Eastwood WJ (2008) Testate amoebae as palaeohydrological proxies in SÜRMENE AG˘AÇBAS¸I YAYLASI peatland (Northeast turkey). Wetlands 28 (in press). doi:10.1672/07-42.1
Plunkett G (2006) Tephra-linked peat humification records from Irish ombrotrophic bogs questions nature of solar forcing at 850 cal.yr BC. J Quat Sci 21:9–16. doi:10.1002/jqs.951
Sageman BB, Bina CR (1997) Diversity and species abundance patterns in Late Cenomanian black shale biofacies, Western Interior, US. Palaios 12:449–466. doi:10.2307/3515383
Schulte EE, Hopkins BG (1996) Estimation of organic matter by weight loss-on-ignition. In: Magdoff FR, Tabatasbai MA, Hanlon EA Jr (eds) Soil Organic Matter: analysis and interpretation. SSSA Special Publication 46, SSSA, Madison, WI, pp 21–31
Scott DB, Medioli FS (1980) Living vs total foraminiferal populations: their relative usefulness in paleoecology. J Paleontol 54:814–831
Sillasoo Ü, Mauquoy D, Blundell A, Charman D, Blaauw M, Daniell JRG, Toms P, Newberry J, Chambers FM, Karofeld E (2007) Plant macrofossils and peat humification at Männikjärve bog as indicators of Late Holocene climate changes in Estonia. Boreas 36:20–37. doi:10.1080/03009480600923360
Šmilauer P (1992) Canodraw User’s Guide v.30. Microcomputer Power, Ithaca, New York
Smith AG, Goddard IC (1991) A 12500 year record of vegetational history at Sluggan Bog, Co Antrim, N. Ireland (incorporating a pollen zone scheme for the nonspecialist). New Phytol 118:167–187. doi:10.1111/j.1469-8137.1991.tb00576.x
Swindles GT (2006) Reconstruction of Holocene climate change from peatlands in the North of Ireland. Ph.D. thesis, Queen’s University, Belfast, Northern Ireland
Swindles GT, Roe HM (2006) Constraining the age of spheroidal carbonaceous particle (SCP) stratigraphies in peats using tephrochronology. Quat Newsl 110:2–9
Swindles GT, Roe HM (2007) Examining the dissolution characteristics of testate amoebae (Protozoa: Rhizopoda) in low pH conditions: implications for peatland palaeoclimate studies. Palaeogeogr Palaeocl 252:486–496. doi:10.1016/j.palaeo.2007.05.004
Swindles GT, Plunkett G, Roe HM (2007a) A delayed climatic response to solar forcing at 2800 cal.BP: multi-proxy evidence from three Irish peatlands. Holocene 17:177–182. doi:10.1177/0959683607075830
Swindles GT, Plunkett G, Roe HM (2007b) A multi-proxy climate record from a raised bog in County Fermanagh, Northern Ireland: a critical examination of the link between bog surface wetness and solar variability. J Quat Sci 22:667–679. doi:10.1002/jqs.1093
Telford RJ, Birks HJB (2005) The secret assumption of transfer functions: problems with spatial autocorrelation in evaluating model performance. Quat Sci Rev 24:2173–2179. doi:10.1016/j.quascirev.2005.05.001
ter Braak CJF (1987) CANOCO - a FORTRAN program for canonical community ordination by (partial) (detrended) (canonical) correspondence analysis, principal components analysis and redundancy analysis (version 2.1). Technical Report LWA-88-02, GLW, Wageningen, The Netherlands
ter Braak CJF (2002) CANOCO for Windows version 4.51. Biometris-Plant Research International, Wageningen
ter Braak CJF, Šmilauer P (2002) CANOCO reference manual and CanoDraw for Windows user’s guide: software for canonical community ordination (version 4.5). Microcomputer Power, Ithaca, p 500
Tolonen K (1986) Rhizopod analysis. In: Berglund BE (ed) Handbook of Holocene palaeoecology and palaeohydrology. Wiley, Chichester, pp 645–666
Tolonen K, Warner BG, Vasander H (1992) Ecology of testaceans (Protozoa: Rhizopoda) in mires in Southern Finland: Autoecology. Arch Protistenkd 142:119–138
Tolonen K, Warner BG, Vasander H (1994) Ecology of testaceans (Protozoa, Rhizopoda) in mires in southern Finland.II Multivariate analysis. Arch Protistenkd 144:97–112
Tomlinson RT, Grant M, Harvey J (1997–1978) Reports from the peatland survey and profiling project to EHS (various sites). School of Geosciences, The Queen’s University of Belfast
Warner BG, Charman DJ (1994) Holocene changes on a peatland in northwestern Ontario interpreted from testate amoebae (Protozoa) analysis. Boreas 23:270–279
Wilmshurst JM, Wiser SK, Charman DJ (2003) Reconstructing Holocene water tables in New Zealand using testate amoebae: differential preservation of tests and implications for the use of transfer functions. Holocene 13:61–72. doi:10.1191/0959683603hl595rp
Woodland WA (1996) Holocene palaeohydrology from testate amoebae analysis: developing a model for British peatlands. Ph.D. Thesis, University of Plymouth, Plymouth, UK
Woodland WA, Charman DJ, Sims PC (1998) Quantitative estimates of water tables and soil moisture in Holocene peatlands from testate amoebae. Holocene 8:261–273. doi:10.1191/095968398667004497
Acknowledgements
This research was undertaken while Graeme Swindles was funded by a Ph.D. studentship from the Department of Employment and Learning, Northern Ireland at Queen’s University, Belfast. We would like to thank Gill Alexander, Yoma Megarry, John Meneely and Maura Pringle for technical assistance. Special thanks go to Julia Simpson and John McAlister for carrying out the chemical analysis of the water samples. Many thanks to Jaime Escobar and one anonymous reviewer for their constructive comments.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Swindles, G.T., Charman, D.J., Roe, H.M. et al. Environmental controls on peatland testate amoebae (Protozoa: Rhizopoda) in the North of Ireland: Implications for Holocene palaeoclimate studies. J Paleolimnol 42, 123–140 (2009). https://doi.org/10.1007/s10933-008-9266-7
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s10933-008-9266-7