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Progression of molecular and phenotypic diversification in resynthesized Brassica juncea (L) gene pool with determinate inflorescence

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Abstract

Indian mustard (Brassica juncea (L) Czern & Coss) is naturally indeterminate. Plants with determinate inflorescence were first discovered in the self progenies of B. juncea (AABB; 2n = 36), resynthesized by combining A-genome from B. napus (AACC; 2n = 38) and B-genome from B. carinata (BBCC; 2n = 34). In the determinate plants, apical meristems were transformed into pods. In contrast, the inflorescence in the indeterminate plants continues to grow indefinitely while producing peripheral flowers. Genotyping and morphological characterization of newly developed determinate gene pool (A8) showed a rapid emergence and progression of genetic and phenotypic alterations which continued even after seven generations of selfing. A large number of determinate genotypes (125) were evaluated to establish agronomic potential of determinate B. juncea. A high proportion of determinate genotypes outperformed the best indeterminate checks, suggesting that critical productivity related traits like pod number, seed size and oil content were not a function of indeterminacy. As the gene for determinacy has also been introgressed in B. napus and B. carinata, the stage is now set for future breeding to aim at crop architectural modifications through determinacy in all three types of oilseed Brassicas grown in the world. Our studies emphasized the role of polyploidy as a major force of differentiation at both genotypic and phenotypic level. Although, there was no direct correlation between evolution of genetic and phenotypic diversities following polyploidization. We suggest the use of polyploidy as a plant breeding tool to benefit from de novo variation rather than restricting its use as a method to overcome sterility following wide hybridization alone.

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References

  • Abbott R, Albach D, Ansell S et al (2013) Hybridization and speciation. J Evol Biol 26:229–246

    Article  CAS  PubMed  Google Scholar 

  • Banga SS (2007) Genetic manipulations for oilseeds improvement—conventional. In: Hedge DM (ed) Changing global vegetable oils scenario: issues and challenges before India. ISOR, Hyderabad, pp 17–34

    Google Scholar 

  • Banga SS, Kaur N (2009) An alternate procedure for resynthesis of Brassica juncea. Proceedings of 16th Australian research assembly on Brassicas, Ballarat, VIC, pp 1–4

  • Bansal P, Kaur P, Banga SK, Banga SS (2009) Augmenting genetic diversity in Brassica juncea through its resynthesis using purposely selected diploid progenitors. Intl J Plant Breed 3:41–45

    Google Scholar 

  • Bansal P, Banga S, Banga SS (2012) Heterosis as investigated in terms of polyploidy and genetic diversity using designed Brassica juncea amphiploid and its progenitor diploid species. PLoS One 7(2):e29607. doi:10.1371/journal.pone.0029607

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Chauhan JS, Singh KH, Singh VV, Kumar S (2011) Hundred years of rapeseed-mustard breeding in India: accomplishments and future strategies. Indian J Agric Sci 81(12):1093–1109

    Google Scholar 

  • Crow JF, Kimura M (1970) An introduction to population genetics theory. Harper & Row, New York

    Google Scholar 

  • Doyle JJ, Doyle JL (1990) Isolation of plant DNA from fresh tissue. Focus 12:13–15

    Google Scholar 

  • Excoffier L, Lischer HEL (2010) Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows. Mol Ecol Resour 10(3):564–567

    Article  PubMed  Google Scholar 

  • Gao H, Williamson S, Bustamante CD (2007) A Markov chain Monte Carlo approach for joint inference of population Structure and inbreeding rates from multilocus genotype data. Genetics 176:1635–1651

    Article  PubMed Central  PubMed  Google Scholar 

  • Goudet J (2002) Fstat 2.9.3.2. http://www2.unil.ch/popgen/softwares/fstat.htm

  • Griffiths AJF, Miller JH, Suzuki DT, Lewontin RC, Gelbart WM (2000) An introduction to genetic analysis, 7th edn. WH Freeman, New York

    Google Scholar 

  • Grover CE, Gallagher JP, Szadkowski EP, Yoo MJ, Flagel LE, Wendel JF (2012) Homoeolog expression bias and expression level dominance in allopolyploids. Plant J 196:966–971

    CAS  Google Scholar 

  • Hanano S, Goto K (2011) Arabidopsis TERMINAL FLOWER 1 is involved in the regulation of flowering time and inflorescence development through transcriptional repression. Plant Cell 23:3172–3184

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Jain A, Bhatia S, Banga SS, Prakash S, Lakshmikumaran M (1994) Potential use of random amplified polymorphic DNA (RAPD) to study the genetic diversity in Indian mustard (Brassica juncea (L) Czern and Coss) and its relationship with heterosis. Theor Appl Genet 88:116–122

    Article  CAS  PubMed  Google Scholar 

  • Jakobsson M, Rosenberg NA (2007) CLUMPP: a cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure. Bioinformatics 23(14):1801–1806

    Article  CAS  PubMed  Google Scholar 

  • Kimura M (1983) The neutral theory of molecular evolution. Cambridge University Press, Cambridge

    Book  Google Scholar 

  • Kimura M, Crow J (1964) The number of alleles that can be maintained in a finite population. Genetics 49:725–738

  • Lee B, Nachmanson L, Robertson G, Carlson JM, Heckerman D (2009) PhyloDet: a scalable visualization tool for mapping multiple traits to large evolutionary trees. Bioinformatics 25:2611–2612

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Levene H (1949) On a matching problem in genetics. Ann Math Stat 20:91–94

  • Li X, Ramachiary N, Choi SR, Nguyen DV, Hossaon JM, Yang HKLY (2010) Development of a high density integrated reference genetic linkage map for the multinational Brassica rapa genome sequencing project. Genome 53:1–9

    Article  Google Scholar 

  • Lodhi MA, Ye GN, Weeden NF, Reisch BI (1994) A simple and efficient method for DNA extraction from grapevine cultivars and Vitis species. Plant Mol Biol Rep 12:6–13

    Article  CAS  Google Scholar 

  • Madlung A, Wendel JF (2013) Genetic and epigenetic aspects polyploid evolution in plants. Cytogenet Genome Res 140(2–4):270–285

    Article  CAS  PubMed  Google Scholar 

  • Maliyakal EJ (1992) An efficient method for isolation of RNA and DNA from plants containing polyphenolics. Nucleic Acid Res 20:23–81

    Google Scholar 

  • Nei M (1972) Genetic distance between populations. Am Nat 106:283–292

    Article  Google Scholar 

  • Nei M (1973) Analysis of gene diversity in subdivided populations. Proc Natl Acad Sci USA 70:3321–3323

  • Nei M (1978) Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89:583–590

    CAS  PubMed Central  PubMed  Google Scholar 

  • Nevo E (1988) Natural selection in action: the interface of ecology and genetics in adaptation and speciation at the molecular and organismal levels. In: Tchernov E, Yom-Tov Y (eds) Zoogeography of Israel. Dr. Junk Pub, Holland, pp 411–438

    Google Scholar 

  • Nevo E (1998) Evolution of a visual system for life without light: optimization via tinkering in blind mole rats. In: Weibel ER, Taylor CR, Bolis C (eds) Principles of animal design: the optimization and symmorphosis debate. Cambridge University Press, Cambridge, pp 288–298

    Google Scholar 

  • Ohta T, Taschida N (1990) Theoretical study of near neutrality. I. Heterozygosity and rate of mutant substitution. Genetics 126:219–229

    CAS  PubMed Central  PubMed  Google Scholar 

  • Prakash S, Wu XM, Bhat SR (2011) History, evolution, and domestication of Brassica crops. Plant Breed Rev 35:19–84

    Google Scholar 

  • Pritchard JK, Stephens M, Donnelly P (2000) Inference of population structure using multilocus genotype data. Genetics 155:945–959

    CAS  PubMed Central  PubMed  Google Scholar 

  • Pritchard JK, Pickrell JK, Coop G (2010) The genetics of human adaptation: hard sweeps, soft sweeps, and polygenic adaptation. Curr Biol 20:208–215

    Article  Google Scholar 

  • Rickett HW (1944) The classification of inflorescences. Bot Rev 10:187

    Article  Google Scholar 

  • Shannon CE, Weaver W (1949) The mathematical theory of communication. University of Illinois Press, Urbana

  • Spiegelhalter DJ, Best NG, Carlin BP, Linde AVD (2002) Bayesian measures of model complexity and fit. J R Stat Soc 64(4):583–639

    Article  Google Scholar 

  • Srivastava A, Mukhopadhyay A, Arumugam M, Gupta V, Verma JK, Pental D, Pradhan AK (2004) Resynthesis of Brassica juncea through interspecific crosses between B. rapa and B. nigra. Plant Breed 123:204–206

    Article  CAS  Google Scholar 

  • Weberling F (1989) Morphology of flowers and inflorescences. Cambridge University Press, Cambridge

    Google Scholar 

  • Wendel JF (2000) Genome evolution in polyploids. Plant Mol Biol 42:225–249

    Article  CAS  PubMed  Google Scholar 

  • Wright S (1931) Evolution in Mendelian populations. Genetics 16:97–169

    CAS  PubMed Central  PubMed  Google Scholar 

Download references

Acknowledgments

This work was supported by Indian Council of Agricultural Research under ICAR National Professor Project “Broadening the genetic base of Indian mustard (B. juncea) through alien introgressions and germplasm enhancement” awarded to S. S. B.

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Correspondence to S. S. Banga.

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Kaur, H., Gupta, S., Kumar, N. et al. Progression of molecular and phenotypic diversification in resynthesized Brassica juncea (L) gene pool with determinate inflorescence. Euphytica 199, 325–338 (2014). https://doi.org/10.1007/s10681-014-1133-1

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