Skip to main content
Log in

Identification of self-incompatibility (S-) genotypes of Chinese apricot cultivars

  • Published:
Euphytica Aims and scope Submit manuscript

Abstract

The S-genotypes of 16 apricot (Prunus armeniaca L.) cultivars native to China were determined by the S-allele PCR approach and the results were confirmed by cross-pollination tests among these cultivars. Primer combination EM-PC2consFD + EM-PC3consR, based on the conserved regions C2 and C3 of Rosaceous S-RNase genes, was the most useful primer combination for identifying Chinese apricot S-alleles. Twelve S-RNase alleles were identified using this primer combination, and they were defined as follows: S 9 was 657 bp, S 10 was 266 bp, S 11 was 464 bp, S 12 was 360 bp, S 13 was 401 bp, S 14 was 492 bp, S 15 was 469 bp, S 16 was 481 bp, S 17 was 487 bp, S 18 was 1337 bp, S 19 was 546 bp and S 20 was 1934 bp. S 11S 20 were new S-RNase genes deposited in GenBank under accession numbers DQ868316, DQ870628-DQ870634, EF133689 and EF160078, respectively. Our findings contribute to a more efficient breeding program of Chinese apricot and further studies on the S-RNase genes.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2

Similar content being viewed by others

References

  • Alburquerque N, Egea J, Pe´rez-Tornero O, Burgo L (2002) Genotyping apricot cultivars for self- (in) compatibility by means of RNases associated with S-alleles. Plant Breed 121:343–347

    Article  CAS  Google Scholar 

  • Batlle I, Ballester J, Boskovic R, Romero MA, Tobutt KR, Vargas FJ (1997) Use of stylar ribonucleases in almond breeding to design crosses and select self-compatible seedlings. FAOCIHEAM Netw Nuts Nucis Newslett 6:12–14

    Google Scholar 

  • Burgos L, Ledbetter CA, Pérez-Tornero O, Ortín-Párraga F, Egea J (1997) Inheritance of sexual incompatibility in apricot. Plant Breed 116:383–386

    Article  Google Scholar 

  • Certal AC, Ricardo BA, Boskovic R, Oliveira MM, Feijó JA (2002) Structural and molecular analysis of self-incompatibility almond (Prunus dulcis). Sex Plant Reprod 15:13–20

    Article  CAS  Google Scholar 

  • Chen XS, Wang ZG, Zhou RY (1989) Studies on the emasculation method for fruit cross. J Shandong Agricultural University 20:21–26

    Google Scholar 

  • Chen XS, Gao DS, Li XL, Zhang YM, Zhang LZ (2001a) ‘Xinshiji’—a new early ripening apricot variety obtained by embryo culture. Acta Horticulturae Sinica 28(5):475

    Google Scholar 

  • Chen XS, Gao DS, Li XL, Zhang YM, Zhang LZ (2001b) ‘Hongfeng’—a new early ripening apricot variety obtained by embryo culture. Acta Horticulturae Sinica 28(6):575

    Google Scholar 

  • Chen XS, Wu Y, Chen MX, He TM, Feng JR, Liang Q, Liu W, Yang HH, Zhang LJ (2006) Inheritance and correction of self-incompatibility and other yield components in the apricot hybrid F1 populations. Euphytica 150:69–74

    Article  Google Scholar 

  • Choil C, Tao R, Andersen RL (2002) Identification of self-incompatibility alleles and pollen incompatibility groups in sweet cherry by PCR based S-allele typing and controlled pollination. Euphytica 123:9–20

    Article  Google Scholar 

  • Entani T, Iwano M, Shiba H, Che F-S, Isogai A, Takyama S (2003) Comparative analysis of the self-incompatibility (S-) locus region of Prunus mume: identification of a pollen-expressed F-box gene with allelic diversity. Genes Cells 8:203–213

    Article  PubMed  CAS  Google Scholar 

  • Feng JR, Chen XS, Wu Y, Liu W, Liang Q, Zhang LJ (2006) Detection and transcript expression of S-RNase gene associated with self-incompatibility in apricot (Prunus armeniaca L.). Mol Biol Rep 33:215–221

    Article  PubMed  CAS  Google Scholar 

  • Hajilou J, Grigorian V, Mohammadi SA, Nazemmieh A, Romero C, Vilanova S, Burgos L (2006) Self- and cross-(in)compatibility between important apricot cultivars in northwest Iran. J Hortic Sci Biotechnol 81(3):513–517

    Google Scholar 

  • Halász J, Hegedûs A, Hermán R, Stefanovits-Bányai É, Pedryc A (2005) New self-incompatibility alleles in apricot (Prunus armeniaca L.) revealed by stylar ribonuclease assay and S-PCR analysis. Euphytica 145:57–66

    Article  Google Scholar 

  • He TM (2006) Study on genetic diversity of Chinese common apricot (Prunus armeniaca L.) germplasm and origin of purple apricot (Prunus dasycarpa). Ph. D. Dissertation, Shandong Agricultural University, Tai’an, 29 p

  • He TM, Chen XS, Xu Z, Gao JS, Lin PJ, Liu W, Liang Q, Wu Y (2007) Using SSR markers to determine the population genetic structure of wild apricot (Prunus armeniaca L.) in the Ily Valley of west China. Genet Resour Crop Evol 54:563–572

    Article  CAS  Google Scholar 

  • Janssens GA, Goderris IG, Broekaert WF, Broothaerts W (1995) A molecular method for S-allele identification in apple based on allele-specific PCR. Theor Appl Genet 91:691–698

    Article  CAS  Google Scholar 

  • Kostina KF (1970) Self-fertility studies in apricot (in Russian). Trud Gos Nikit Botan Sada XLV:7–17.30

    Google Scholar 

  • López M, Alonso JM, Martínez-Gómez P, Socías I, Company R, Gradziel TM, Batlle I (2001) Biological and molecular assessment of self-incompatibility in almond. FAOCIHEAM Netw Nuts Nucis Newslett 10:8–11

    Google Scholar 

  • de Nettancourt D (1977) Incompatibility in angiosperms. Springer-Verlag, Berlin

    Google Scholar 

  • Norioka N, Katayama H, Matsuki T, Ishimizu T, Takasaki T, Nakanishi T, Norioka S (2001) Sequence comparison of the 5′ flanking regions of Japanese pear (Pyrus pyrifolia) S-RNases associated with gametophytic self-incompatibility. Sex Plant Reprod 13:289–291

    Article  CAS  Google Scholar 

  • Ortega E, Sutherland BG, Dicenta F, Bošković R, Tobutt KR (2005) Determination of incompatibility genotypes in almond using first and second intron consensus primers: detection of new S-alleles and correction of reported S-genotypes. Plant Breed 124:188–196

    Article  CAS  Google Scholar 

  • Qi J (2003) Cloning and expression of genes associated with self-incompatibility in apricot (Prunus armeniaca L.). Ph.D. Dissertation, Shandong Agricultural University, Tai’an, 23 p

  • Sanzol J, Sutherlandand BG, Robbins TP (2006) Identification of genomic DNA sequences of the S-ribonuclease gene associated with self-incompatibility alleles S 1 to S 5 in European pear. Plant Breed 125:513–518

    Article  CAS  Google Scholar 

  • Sonneveld T, Robbins TP, Boskovic R, Tobutt KR (2001) Cloning of six cherry self-incompatibility alleles and development of allele-specific PCR detection. Theor Appl Genet 102:1046–1055

    Article  CAS  Google Scholar 

  • Sonneveld T, Tobutt KR, Robbins TP (2003) Allele-specific PCR detection of sweet cherry self-incompatibility (S) alleles S 1 to S 16 using consensus and allele-specific primers. Theor Appl Genet 107:1059–1070

    Article  PubMed  CAS  Google Scholar 

  • Sutherland BG, Robbins TP, Tobutt KR (2004) Primers amplifying a range of Prunus S-alleles. Plant Breed 123:582–584

    Article  CAS  Google Scholar 

  • Tamura M, Ushijima K, Sassa H, Hirano H, Tao R, Gradziel TM, Dankekar AM (2000) Identification of self-incompatibility genotypes of almond by allele-specific PCR analysis. Theor Appl Genet 101:344–349

    Article  CAS  Google Scholar 

  • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876–4882

    Article  PubMed  CAS  Google Scholar 

  • Tao R, Yamane H, Sugiura A, Murayama H, Sassa H, Mori H (1999) Molecular typing of S-alleles through identification, characterization and cDNA cloning for S-RNases in sweet cherry. J Am Soc Hort Sci 124:224–233

    CAS  Google Scholar 

  • Tao R, Habu T, Yamane H, Sugiura A, Iwamoto K (2000) Molecular markers for self-incompatibility in Japanese Apricot (Prunus mume). HortScience 35:1121–1123

    CAS  Google Scholar 

  • Vilanova S, Romero C, Llacer G, Badenes ML (2005) Identification of self-(in)compatibility alleles in apricot by PCR and sequence analysis. J Am Soc Hort Sci 130(6):893–898

    CAS  Google Scholar 

  • Wiersma PA, Wu Z, Zhou L, Hampson C, Kappel F (2001) Identification of new self-incompatibility alleles in sweet cherry (Prunus avium L.) and clarification of incompatibility groups by PCR and sequencing analysis. Theor Appl Genet 102:700–708

    Article  CAS  Google Scholar 

  • Wu SJ, Chen XS (2003) RAPD analysis of apricot cultivars. J Fruit Sci 20(2):108–111

    Google Scholar 

  • Wünsch A, Hormaza JI (2004) S-allele identification by PCR analysis in sweet cherry cultivars. Plant Breed 123:327–331

    Article  Google Scholar 

  • Yaegaki H, Shimada T, Moriguchi T, Hayama H, Haji T, Yamaguchi M (2001) Molecular characterization of S-RNase genes and S-genotypes in the Japanese apricot (Prunus mume Sieb. et Zucc.). Sex Plant Reprod 13:251–257

    Article  CAS  Google Scholar 

Download references

Acknowledgements

This research was financially supported by the National Natural Science Foundation of China (No. 30370992). Authors want to thank Dr. Adam J Lukaszewski (University of California) for his help in revision of this manuscript.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Xuesen Chen.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Zhang, L., Chen, X., Chen, X. et al. Identification of self-incompatibility (S-) genotypes of Chinese apricot cultivars. Euphytica 160, 241–248 (2008). https://doi.org/10.1007/s10681-007-9544-x

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10681-007-9544-x

Keywords

Navigation