Skip to main content
Log in

SSR and STS markers for wheat stripe rust resistance gene Yr26

  • Published:
Euphytica Aims and scope Submit manuscript

Abstract

Stripe (yellow) rust, caused by Puccinia striiformis f. sp. tritici (Pst), is one of the most devastating wheat diseases worldwide. Triticum aestivum-Haynaldia villosa 6VS/6AL translocation lines carrying the Yr26 gene on chromosome 1B, are resistant to most races of Pst used in virulence tests. In order to better utilize Yr26 for wheat improvement, we attempted to screen SSR and EST-based STS markers closely linked with Yr26. A total of 500 F2 plants and the F2:3 progenies derived from a cross between 92R137 and susceptible cultivar Yangmai 5 were inoculated with race CYR32. The analysis confirmed that stripe rust resistance was controlled by a single dominant gene, Yr26. Among 35 pairs of genomic SSR markers and 81 pairs of STS markers derived from EST sequences located on chromosome 1B, Yr26 was flanked by 5 SSR and 7 STS markers. The markers were mapped in deletion bins using CS aneuploid and deletion lines. The closest flanking marker loci, Xwe173 and Xbarc181, mapped in 1BL and the genetic distances from Yr26 were 1.4 cM and 6.7 cM, respectively. Some of these markers were previously reported on 1BS. Eight common wheat cultivars and lines developed from the T. aestivum-H. villosa 6VS/6AL translocation lines by different research groups were tested for presence of the markers. Five lines with Yr26 carried the flanking markers whereas three lines without Yr26 did not. The results indicated that the flanking markers should be useful in marker-assisted selection for incorporating Yr26 into wheat cultivars.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3

Similar content being viewed by others

Reference

  • Bariana HS, McIntosh RA (1993) Cytogenetic studies in wheat. XV. Location of rust resistance genes in VPM1 and their genetic linkage with other disease resitance genes in chromosome 2A. Genome 36:476–482

    Article  CAS  PubMed  Google Scholar 

  • Bryan GJ, Collins AJ, Stephenson P, Orry A et al (1997) Isolation and characterization of microsatellites from hexaploid bread wheat. Theor Appl Genet 94:557–563

    Article  CAS  Google Scholar 

  • Cao ZJ, Wang MN, Jing JX (2001) Progress in the inheritance of resistance to stripe rust in wheat. Triticeae Crops 21:80–83

    Google Scholar 

  • Chen PD, Qi LL, Zhou B (1995) Development and molecular cytogenetic analysis of wheat-Haynaldia villosa 6VS/6AL translocation lines specifying resistance to powdery mildew. Theor Appl Genet 91:1125–1128

    Article  Google Scholar 

  • Chen PD, Liu DJ, Qi LL, Zhou B et al (2001) A new resistance resource of wheat yellow rust and its spectrum preliminary test for resistance. Acta Phytopath Sin 31:31–36

    Google Scholar 

  • Chen PD, Zhang SZ, Wang XE, Wang SL et al (2002) New wheat variety Nannong9918 with high yield and powdery mildew resistance. Nanjing Agric Univ 25:105–106

    Google Scholar 

  • Chen XM (2005) Epidemiology and control of stripe rust [Puccinia striiformis f. sp. tritici] on wheat. Can J Plant Pathol 27:314–337

    Article  Google Scholar 

  • Chen XM, Line RF, Hayes PM, Toojinda T et al. (1999) Mapping barley genes for resistance to stripe rust, leaf rust, and scab using resistance gene analog polymorphism and restriction fragment length polymorphism. Phytopathology 89 (suppl.), s15

  • Francki M, Carter M, Ryan K, Hunter A et al (2004) Comparative organization of wheat homoeologous group 3S and 7L using wheat-rice synteny and identification of potential markers for genes controlling xanthophyll content in wheat. Funct Integr Genomics 4:118–130

    Article  PubMed  CAS  Google Scholar 

  • Gao SG (1999) Identification and analysis of resistance of NAU92R wheat lines. Acta Agron Sin 25:389–391

    Google Scholar 

  • Guyot R, Yahiaoui N, Feuillet C, Keller B et al (2004) In silico comparative analysis reveals a mosaic conservation of genes within a novel collinear region in wheat chromosome 1AS and rice chromosome 5S. Funct Integr Genomics 4:47–58

    Article  PubMed  CAS  Google Scholar 

  • Hitta L, Manni S, Foolad M (1995) Development of PCR-based markers to identify rice blast resistance gene Pi-2lt in a segregating population. Theor Appl Genet 91:9–14

    Google Scholar 

  • Huang GY, Pang QH, Zhou Q, Tao J et al (2000) Evaluation and utilization of a new stripe rust-resistant wheat germplasm 92R149. Triticeae Crops 20:91–93

    Google Scholar 

  • Kam-Morgan LNW, Gill BS, Muthukrishnan S (1989) DNA restriction fragment length polymorphisms: a strategy for genetic mapping of D genome of wheat. Genome 32:724–732

    CAS  Google Scholar 

  • Li ZQ (1980) The variation of wheat variety resistance to stripe rust in China and the way of its solution. Sci Agric Sin 3:72–77

    Google Scholar 

  • Li GQ, Li ZF, Yang WY, Zhang Y (2006) Molecular mapping of stripe rust resistance gene YrCH42 in Chinese wheat cultivar Chuanmai 42 and its allelism with Yr24 and Yr26. Theor Appl Genet 112:1434–1440

    Article  PubMed  CAS  Google Scholar 

  • Lincoln S, Daly M, Lander E (1992) Constructing genetic maps with mapmaker/EXP3.0. Whitehead Institute Techn Rep, 3rd edn. Whitehead Institute, Cambridge

    Google Scholar 

  • Liu RH, Meng JL (2003) MapDraw: a Microsoft Excel macro for drawing genetic linkage maps based on given genetic linkage data. Hereditas (Beijing) 25:317–321

    Google Scholar 

  • Ma JX, Zhou RH, Dong YS, Wang LF et al (2001) Molecular mapping and detection of the yellow rust resistance gene Yr26 in wheat transferred from Triticum turgidum L. using microsatellite markers. Euphytica 120:219–226

    Article  CAS  Google Scholar 

  • McIntosh RA, Silk J, The TT (1996) Cytogenetic studies in wheat XVII. Monosomic analysis and linkage relationships of gene Yr15 for resistance to stripe rust. Euphytica 89:395–399

    Google Scholar 

  • McIntosh RA, Yamazaki Y, Devos KM, Dubcovsky J et al (2003) Catalogue of gene symbols for wheat. In: Pogna NE, Romano N, Pogna EA, Galterio G (eds) Proc 10th int wheat genet symp, vol 5. Instituto Sperimentale per la Cerealcoltura, Rome

    Google Scholar 

  • McIntosh RA, Hart GE, Devos KM, Rogers WJ et al (2004) Catalogue of gene symbols for wheat: 2004 supplement. http://www.shigen.lab.nig.ac.jp/wheat/komugi/genes/macgene/supplement2004.html

  • McIntosh RA, Devos KM, Dubcovsky J, Rogers WJ et al (2005) Catalogue of gene symbols for wheat: 2005 supplement. http://www.shigen.lab.nig.ac.jp/wheat/komugi/genes/macgene/

  • Michelmore RW, Param I, Kesseli RV (1991) Identification of markers linked to disease resistance genes by bulked segregant analysis: a rapid method to detect markers in specific genomic regions using segragation population. Proc Natl Acid Sci USA 88:9828–9832

    Article  CAS  Google Scholar 

  • Niu YC, Wu LR (1997) The breakdown of resistance to stripe rust in Fan6-Mianyang wheat cultivars and statistics for its control. Acta Phytopath Sin 27:5–8

    Google Scholar 

  • Qi LL, Chen PD, Liu DJ, Zhou B et al (1995) The gene Pm21 a new source for resistance to wheat powdery mildew. Acta Agron Sin 21:257–262

    Google Scholar 

  • Qi LL, Echalier B, Friebe B, Gill BS (2003) Molecular characterization of a set of wheat deletion stocks for use in chromosome bin mapping of ESTs. Funct Integr Genomics 3:39–55

    PubMed  CAS  Google Scholar 

  • Peng JH, Fahima T, Röder MS, Li YC (1999) Microsatellite tagging of the stripe-rust resistance gene YrH52 derived from wild emmer wheat, Triticum dicoccoides, and suggestive negative crossover interference on chromosome 1B. Theor Appl Genet 98:862–872

    Article  CAS  Google Scholar 

  • Peng JH, Fahima T, Röder MS, Huang QY et al (2000) High-density molecular map of chromosome region harboring stripe-rust resistance genes YrH52 and Yr15 derived from wild emmer wheat, Triticum dicoccoides. Genetica 109:199–210

    Article  PubMed  CAS  Google Scholar 

  • Plaschke J, Ganal MW, Röder MS (1995) Detection of genetic diversity in closely related bread wheat using microsatellite markers. Theor Appl Genet 91:1001–1007

    Article  CAS  Google Scholar 

  • Röder MS, Plaschke J, Konig SU (1995) Abundance, variability and chromosomal location of microsatellites in wheat. Mol Gen Genet 246:327–333

    Article  PubMed  Google Scholar 

  • Sharp PJ, Kreis M, Shewry P (1988) Location of β-amylase sequence in wheat and its relatives. Theor Appl Genet 75:289–290

    Article  Google Scholar 

  • Somers DJ, Isaac P, Edwards K (2004) A high-density microsatellite consensus map for bread wheat. Theor Appl Genet 109:1105–1114

    Article  PubMed  CAS  Google Scholar 

  • Song QJ, Shi JR, Singh S, Fiekus EW et al (2005) Development and mapping of microsatellite (SSR) markers in wheat. Theor Appl Genet 110:550–560

    Article  PubMed  CAS  Google Scholar 

  • Sun Q, Wei Y, Ni Z (2002) Microsatellite marker for yellow rust resistance gene Yr5 in wheat introgressed from spelt wheat. Plant Breeding 121:539–541

    Article  CAS  Google Scholar 

  • Tixier MH, Sourdille PMS (1997) Detection of wheat microsallite using no-radioactive silver nitrate staining method. Genet Breed 51:175–177

    CAS  Google Scholar 

  • Wang FL, Wu LR, Xu SC, Yang JX, Liu SY (1996) Systematic investigations on the breakdown of resistance in wheat cultivar Mianyang derivatives to stripe rust. Acta Phytopath Sin 26:105–109

    Google Scholar 

  • Wang LF, Ma JX, Zhou RH, Wang XM et al (2002) Molecular tagging of the yellow rust resistance gene Yr10 in common wheat, P.I. 178383 (Triticum aestivum L.). Euphytica 124:71–73

    Article  CAS  Google Scholar 

  • Wu LR, Niu YC (2000) Strategies of sustainable control of wheat stripe rust in China. Sci Agric Sin 33:1–7

    Google Scholar 

  • Zakari A, McIntosh RA, Hovmoller MS, Wellings CR et al (2003) Recombination of Yr15 and Yr24 in chromosome 1BS. In: Pogna NE, Romano N, Pogna EA, Galterio G (eds) Proc 10th int wheat genet symp, vol 1. Instituto Sperimentale per la Cerealcoltura, Rome, pp 417–420

    Google Scholar 

Download references

Acknowledgements

We are grateful to Prof. R.A. McIntosh for his critical review of this manuscript and Xiue Wang, Shouzhong Zhang, Baotong Wang and Shoucheng Chai for help in the study. This research was supported by grants from the National High Technology Research and Development Program of China (2001AA222152, 2004AA222140), the Natural Science Foundation of China (30471080), and the Program for Changjiang Scholars and Establishing Innovative Research Teams in Universities.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Peidu Chen.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Wang, C., Zhang, Y., Han, D. et al. SSR and STS markers for wheat stripe rust resistance gene Yr26 . Euphytica 159, 359–366 (2008). https://doi.org/10.1007/s10681-007-9524-1

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10681-007-9524-1

Keywords

Navigation