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Assignment of chromosome rearrangements between X chromosomes of human and cattle by laser microdissection and Zoo-FISH

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Abstract

Cross-species fluorescence in-situ hybridization (Zoo-FISH) was performed on cattle metaphase spreads using Homo sapiens X chromosome (HSAX) painting probes specific for the p- and q-arms to identify the cytogenetic location of a chromosome breakpoint between HSAX and the Bos taurus X chromosome (BTAX). The existence of a breakpoint is strongly suggested by recent radiation hybrid and FISH mapping results. Hybridization probes were generated by microdissection of HSAX p- and q-arms using the contact-free technology of Laser Microdissection and Pressure Catapulting (LMPC), amplification of the isolated chromosome material by DOP-PCR, and labelling of the PCR products with digoxigenin in a secondary PCR. Independent Zoo-FISH of the two painting probes on bovine metaphase chromosomes (detected by antidigoxigenin-fluorescein) resulted in clear hybridization signals on BTAX. A breakpoint was identified between HSAXp and HSAXq on BTAX, and narrowed down between the G-bands BTAXq25 and BTAXq26. The assumed centromere transposition between HSAX and BTAX associated with the rearranged chromosome segments is supported by cytogenetic assignments of the genes BGN and G6PD to BTAX.

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References

  • Amaral ME, Kata SR, Womack JE (2002) A radiation hybrid map of bovine X chromosome (BTAX). Mamm Genome 13: 268–271.

    Article  PubMed  Google Scholar 

  • Band MR, Larson JH, Rebeiz M et al. (2000) An ordered comparative map of the cattle and human genomes. Genome Res 10: 1359–1368.

    Article  PubMed  Google Scholar 

  • Chowdhary BP, Fronicke L, Gustavsson L, Scherthan H (1996) Comparative analysis of the cattle and human genomes: detection of ZOOFISH and gene mapping-based chromosomal homologies. Mamm Genome 7: 297–302.

    Article  PubMed  Google Scholar 

  • Di Berardino D, Vozdova M, Kubickova S et al. (2004) Sexing river buffalo (Bubalus bubalis L.), sheep (Ovis aries L.), goat (Capra hircus L.), and cattle spermatozoa by double color FISH using bovine (Bos taurus L.) X- and Y-painting probes. Mol Reprod Dev 67: 108–115.

    Article  PubMed  Google Scholar 

  • Everts-van der Wind A, Kata SR, Band MR et al. (2004) A 1463 gene cattle–human comparative map with anchor points defined by human genome sequence coordinates. Genome Res 14: 1424–1437.

    Article  PubMed  Google Scholar 

  • Goldammer T, Brunner RM, Schwerin M (1997) Comparative analysis of Y chromosome structure in Bos taurus and B. indicus by FISH using region-specific, microdissected, and locus-specific DNA probes. Cytogenet Cell Genet 77: 238–241.

    PubMed  Google Scholar 

  • Goldammer T, Amaral MEJ, Brunner RM et al. (2003) Clarifications on breakpoints in HSAX and BTAX by comparative mapping of F9, HPRT, and XIST in cattle. Cytogenet Genome Res 101: 39–42.

    Article  PubMed  Google Scholar 

  • Guan XY, Meltzer PS, Trent JM (1994) Rapid generation of whole chromosome painting probes (WCPs) by chromosome microdissection. Genomics 22: 101–107.

    Article  PubMed  Google Scholar 

  • Hayes H (1995) Chromosome painting with human chromosome-specific DNA libraries reveals the extent and distribution of conserved segments in bovine chromosomes. Cytogenet Cell Genet 71: 168–174.

    PubMed  Google Scholar 

  • Iannuzzi L, Di Meo GP, Perucatti A et al. (2000) Comparative FISH mapping of bovid X chromosomes reveals homologies and divergences between the subfamilies bovinae and caprinae. Cytogenet Cell Genet 89: 171–176.

    Article  PubMed  Google Scholar 

  • ISCNDB 2000 (2001) International System for Chromosome Nomenclature of Domestic Bovids. Cytogenet Cell Genet 92: 283–299.

    Google Scholar 

  • Kubickova S, Cernohorska H, Musilova P, Rubes J (2002) The use of laser microdissection for the preparation of chromosome-specific painting probes in farm animals. Chromosom Res 10: 571–577.

    Article  Google Scholar 

  • Liang BC, Meltzer PS, Guan XY, Trent JM (1995) Gene amplification elucidated by combined chromosomal microdissection and comparative genomic hybridization. Cancer Genet Cytogenet 80: 55–59.

    Article  PubMed  Google Scholar 

  • Lyons LA, Laughlin TF, Copeland NG, Jenkins NA, Womack JE, O’Brien SJ (1997) Comparative anchor tagged sequences (CATS) for integrative mapping of mammalian genomes. Nat Genet 15: 47–56.

    Article  PubMed  Google Scholar 

  • Pinkel D, Straume T, Gray JW (1986) Cytogenetic analysis using quantitative, high-sensitivity, fluorescence hybridization. Proc Natl Acad Sci U S A 83: 2934–2938.

    PubMed  Google Scholar 

  • Piumi F, Schibler L, Vaiman D et al. (1998) Comparative cytogenetic mapping reveals chromosome rearrangements between the X chromosomes of two closely related mammalian species (cattle and goats). Cytogenet Cell Genet 81: 36–41.

    Article  PubMed  Google Scholar 

  • Ponce de Leon FA, Ambady S, Hawkins GA et al. (1996) Development of a bovine X chromosome linkage group and painting probes to assess cattle, sheep, and goat X chromosome segment homologies. Proc Natl Acad Sci U S A 93: 3450–3454.

    Article  PubMed  Google Scholar 

  • Raudsepp T, Lee EJ, Kata SR et al. (2004) Exceptional conservation of horse–human gene order on X chromosome revealed by high-resolution radiation hybrid mapping. Proc Natl Acad Sci U S A 101: 2386–2391.

    Article  PubMed  Google Scholar 

  • Solinas-Toldo S, Lengauer C, Fries R (1995) Comparative genome map of human and cattle. Genomics 27: 489–496.

    Article  PubMed  Google Scholar 

  • Watson JM, Spencer JA, Riggs AD, Graves JA (1990) The X chromosome of monotremes shares a highly conserved region with the eutherian and marsupial X chromosomes despite the absence of X chromosome inactivation. Proc Natl Acad Sci USA 87: 7125–7129.

    PubMed  Google Scholar 

  • Womack JE, Johnson JS, Owens EK et al. (1997) A whole-genome radiation hybrid panel for bovine gene mapping. Mamm Genome 8: 854–856.

    Article  PubMed  Google Scholar 

  • Zhu B, Smith JA, Tracey SM et al. (1999) A 5× genome coverage bovine BAC library: production, characterization, and distribution. Mamm Genome 10: 706–709.

    Article  PubMed  Google Scholar 

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Correspondence to Tom Goldammer.

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Rubes, J., Kubickova, S., Musilova, P. et al. Assignment of chromosome rearrangements between X chromosomes of human and cattle by laser microdissection and Zoo-FISH. Chromosome Res 13, 569–574 (2005). https://doi.org/10.1007/s10577-005-0982-9

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  • DOI: https://doi.org/10.1007/s10577-005-0982-9

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