Abstract
Nematode-trapping fungi are ubiquitous in terrestrial habitats in dung, soils, litter and woody debris and they also occur in freshwater, but only one species has been found in marine habitats. The purpose of this study was therefore to investigate whether nematode-trapping fungi occurred in mangrove habitats. To achieve this we assessed the diversity of nematode-trapping fungi on decaying litter from mangroves, freshwater and terrestrial habitats (22 sites) in Hong Kong. Composite samples (n = 1,320) of decaying litter (wood and leaves) were examined and a total of 31 species of nematode-trapping fungi belonging to four genera, Arthrobotrys, Monacrosporium, and Dactylella were recorded. Twenty-nine species reported in this study are new records for Hong Kong and 16 species are new records from mangrove habitats worldwide. Nematode trapping fungi are therefore present in marine environments. Commonly encountered taxa were Arthrobotrys oligospora and Monacrosporium thaumasium which are abundant in all habitats. A. oligospora, M. thaumasium and Arthrobotrys musiformis were frequent (F > 10%). Twenty-six species were rare (0.16–9.32%). Species richness and diversity was higher in terrestrial than in freshwater and mangrove habitats (ANOVA, P < 0.001). A higher mean diversity was observed on decaying leaves as compared to decaying wood in all habitats (P < 0.001). Based on Shannon diversity index, it was also observed that taxa characterized by adhesive nets were more frequent in all habitats. This can be explained by the fact that these taxa may have a better competitive saprotrophic ability which would allow them to compete favourably in nutrient limited environments. Abiotic factors that could be linked to differences in species diversity between decaying wood and leaves are also discussed.
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References
Alias SA, Jones EBG (2000) Colonization of mangrove wood by marine fungi at Kuala Selangor mangrove stand, Malaysia. Fungal Divers 5:9–21
Ananda K, Sridhar KR (2004) Diversity of filamentous fungi on decomposing leaf and woody litter of mangrove forests in the southwest coast of India. Curr Sci 87:1431–1435
Anastasiou CJ (1964) Some aquatic fungi imperfecti from Hawaii. Pac Sci 18:202–206
Anderson IC, Cairney JWG (2004) Diversity and ecology of soil fungal communities: increased understanding through the application of molecular techniques. Environ Microbiol 6:769–779. doi:10.1111/j.1462-2920.2004.00675.x
Berg Å, Gärdenfors U, Hallingbäck T, Norén M (2002) Habitat preferences of red-listed fungi and bryophytes in woodland key habitats in southern Sweden—analyses of data from a national survey. Biodivers Conserv 11:1479–1503. doi:10.1023/A:1016271823892
Boddy L (2001) Fungal community ecology and wood decomposition processes in angiosperms, from standing tree to complete decay of course woody debris. Ecol Bull 49:43–56
Bongers T, Ferris H (1999) Nematode community structure as a bioindicator in environmental monitoring. Trends Ecol Evol 14:224–228. doi:10.1016/S0169-5347(98)01583-3
Byrne PJ, Jones EBG (1975) Effect of salinity on spore germination of terrestrial and marine fungi. Trans Br Mycol Soc 64:497–503
Cai L, Tsui CKM, Zhang K, Hyde KD (2002) Aquatic fungi from Lake Fuxian, Yunnan, China. Fungal Divers 9:57–70
Cai L, Zhang KQ, McKenzie EHC, Hyde KD (2003) Freshwater fungi from bamboo and wood submerged in the Liput River in the Philippines. Fungal Divers 13:1–12
Cai L, Ji KF, Hyde K (2006) Variation between freshwater and terrestrial fungal communities on decaying bamboo culms. Antonie Van Leeuwenhoek 89:293–301. doi:10.1007/s10482-005-9030-1
Chen J, Xu LL, Liu B, Liu XZ (2007) Taxonomy of Dactylella complex and Vermispora. I. Generic concepts based on morphology and ITS sequences data. Fungal Divers 26:73–83
Chinnadurai G, Fernando OJ (2007) Meiofauna of mangroves of the southeast coast of India with special reference to the free-living marine nematode assemblage. Estuar Coast Shelf Sci 72:329–336. doi:10.1016/j.ecss.2006.11.004
Cooke RC (1963) Ecological characteristics of nematode-trapping hyphomycetes I. Preliminary studies. Ann Appl Biol 52:431–437. doi:10.1111/j.1744-7348.1963.tb03767.x
Das M, Royer TV, Leff LG (2007) Diversity of fungi, bacteria, and actinomycetes on leaves decomposing in a stream. Appl Environ Microbiol 73:756–767. doi:10.1128/AEM.01170-06
Duong LM, Jeewon R, Lumyong S, Hyde KD (2006) DGGE coupled with ribosomal DNA gene phylogenies reveal uncharacterized fungal phylotypes. Fungal Divers 23:121–138
Duong LM, McKenzie EHC, Lumyong S, Hyde KD (2008) Fungal succession on senescent leaves of Castanopsis diversifolia in Doi Suthep-Pui National Park, Thailand. Fungal Divers 30:23–36
Elshafie AE, Al-Bahry SN, Ba-Omar T (2003) Nematophagous fungi isolated from soil in Oman. Sydowia 55:18–32
Esseen PA, Ehnstrom B, Ericson L, Sjoberg K (1997) Boreal forests. Ecol Bull 46:16–47
Fryar SC, Booth W, Davies J, Hodgkiss IJ, Hyde KD (2004) Distribution of fungi on wood in the Tutong River, Brunei. Fungal Divers 17:17–38
Gopal B, Chauhan M (2006) Biodiversity and its conservation in the Sundarban mangrove ecosystem. Aquat Sci 68:338–354
Gotelli NJ, Colwell RK (2001) Quantifying biodiversity: procedures and pitfalls in the measurement and comparison of species richness. Ecol Lett 4:379–391
Gray NF (1983) Ecology of nematophagous fungi: distribution and habitat. Ann Appl Biol 102:501–509. doi:10.1111/j.1744-7348.1983.tb02721.x
Gray NF (1987) Nematophagous fungi with particular reference to their ecology. Biol Rev Camb Philos Soc 62:245–304. doi:10.1111/j.1469-185X.1987.tb00665.x
Gray NF (1988) Ecology of nematophagous fungi: effect of the soil nutrients N, P and K, and seven major metals on distribution. Plant Soil 108:286–290. doi:10.1007/BF02375661
Gulis V, Suberkropp K, Rosemond AD (2008) Comparison of fungal activities on wood and leaf litter in unaltered and nutrient-enriched headwater streams. Appl Environ Microbiol 74:1094–1101. doi:10.1128/AEM.01903-07
Hao Y, Luo J, Zhang K (2004) A new aquatic nematode-trapping hyphomycete. Mycotaxon 89:235–239
Hao Y, Mo M, Su H, Zhang KQ (2005) Ecology of aquatic nematode-trapping hyphomycetes in southwestern China. Aquat Microb Ecol 40:175–181. doi:10.3354/ame040175
Harmon ME, Franklin JF, Swanson FJ, Sollins P, Gregory SV, Lattin JD et al (1986) Ecology of coarse woody debris in temperate ecosystems. Adv Ecol Res 15:133–276. doi:10.1016/S0065-2504(08)60121-X
Heilmann-Clausen J, Christensen M (2004) Does size matter? On the importance of various dead wood fractions for fungal diversity in Danish beech forests. For Ecol Manag 201:105–117
Ho WH, Yanna, Hyde KD, Hodgkiss IJ (2002) Seasonality and sequential occurrence of fungi on wood submerged in Tai Po Kau Forest Stream, Hong Kong. Fungal Divers 10:21–43
Hyde KD (1988) Observations on the vertical distribution of marine fungi on Rhizophora spp., at Kampong Danau mangrove Brunei. Brunei Asian Mar 5:77–81
Hyde KD (1989) Ecology of tropical marine fungi. Hydrobiologia 178:199–208. doi:10.1007/BF00006027
Hyde KD (1990) A study of vertical zonation of intertidal fungi on Rhizophora apiculata at Kampong Kapok mangrove, Brunei. Aquat Bot 36:255–262. doi:10.1016/0304-3770(90)90039-N
Hyde KD, Alias SA (2000) Biodiversity and distribution of fungi associated with decomposing Nypa fruticans. Biodivers Conserv 9:393–402. doi:10.1023/A:1008911121774
Hyde KD, Goh TK (1998) Fungi on submerge wood in the Riviere St Marie-Louis, The Seychelles. S Afr J Bot 64:330–336
Hyde KD, Lee SY (1995) Ecology of mangrove fungi and their role in nutrient cycling: what gaps occur in our knowledge? Hydrobiologia 295:107–118. doi:10.1007/BF00029117
Hyde KD, Jones EBG, Leano E, Pointing SB, Poonyth AD, Vrijmoed LLP (1998) Role of fungi in marine ecosystems. Biodivers Conserv 7:1147–1161. doi:10.1023/A:1008823515157
Ilieva-Makulec K, Olejniczak I, Szanser M (2006) Response of soil micro- and mesofauna to diversity and quality of plant litter. Eur J Soil Biol 42:S244–S249. doi:10.1016/j.ejsobi.2006.07.030
Ingold CT (1944) Some new aquatic hyphomycetes. Trans Br Mycol Soc 27:45–46
Jaffee BA, Strong DR, Muldoon AE (1996) Nematode-trapping fungi of a natural scrubland: tests for food chain involvement. Mycologia 88:554–564. doi:10.2307/3761149
Jansson HB, Lopez-Llorca LV (2001) Biology of nematophagous fungi. In: Misra JK, Horn BW (eds) Trichomycetes and other fungal groups, 1st edn. Science, Plymouth, pp 145–172
Johnson TW, Autery CL (1961) An Arthrobotrys from brackish water. Mycologia 53:432–433. doi:10.2307/3756586
Kataoka R, Taniguchi T, Ooshima H, Futai K (2008) Comparison of the bacterial communities established on the mycorrhizae formed on Pinus thunbergii root tips by eight species of fungi. Plant Soil 304:267–275. doi:10.1007/s11104-008-9548-x
Kerry BR (1987) Biological control. In: Brown RH, Kerry BR (eds) Principles and practice of nematode control in crops. Academic Press, New York, pp 233–263
Kerry BR (2000) Rhizosphere interactions and the exploitation of microbial agents for the biological control of plant-parasitic nematodes. Annu Rev Phytopathol 38:423–441. doi:10.1146/annurev.phyto.38.1.423
Kodsueb R, McKenzie EHC, Lumyong P, Hyde KD (2008) Fungal succession on leaf litter of Mangolia liliifera (Magnoliaceae). Fungal Divers 30:55–72
Lambshead PJD, Boucher G (2003) Marine nematode deep-sea biodiversity-hyperdiverse or hype? J Biogeogr 30:475–485
Larsen M, Nansen P, Gronvold J, Wolstrup J, Henriksen SA (1997) Biological control of gastro-intestinal nematodes; facts, future, or fiction? Vet Parasitol 72:479–492. doi:10.1016/S0304-4017(97)00112-X
Li TF, Zhang KQ, Liu XZ (2000) Taxonomy of nematophagous fungi, 1st edn. Science, Beijing
Li LF, Li T, Zhao ZW (2007) Differences of arbuscular mycorrhizal fungal diversity and community between a cultivated land, an old field, and a never-cultivated field in a hot and arid ecosystem of southwest China. Mycorrhiza 17:655–665. doi:10.1007/s00572-007-0143-4
Liu XF, Zhang KQ (2003) Dactylella shizishanna sp. nov., from Shizi Mountain, China. Fungal Divers 14:103–107
Liu B, Liu XZ, Zhuang WY (2005) Orbilia querci sp. nov. and its knob-forming nematophagous anamorph. FEMS Microbiol Lett 245:99–105. doi:10.1016/j.femsle.2005.02.027
Lonsdale D, Pautasso M, Holdenrieder O (2008) Wood-decaying fungi in the forest: conservation needs and management options. Eur J For Res 127:1–22. doi:10.1007/s10342-007-0182-6
Magurran AE (1988) Ecological diversity and its measurement. Croom Helm, London
Maser C, Trappe JM (1984) The seen and unseen world of the fallen tree. Gen. Tech. Rep. PNW-164. US Department of Agriculture, Forest Service, Pacific Northwest Forest and Range Experiment Station, 56 p
Mo MH, Huang X, Zhou W, Huang Y, Hao YE, Zhang KQ (2005) Arthrobotrys yunnanensis sp. nov., the fourth anamorph of Orbilia auricolor. Fungal Divers 18:107–115
Mo MH, Chen WM, Su HY, Zhang KQ, Duan CQ, He DM (2006) Heavy metal tolerance of nematode-trapping fungi in lead-polluted soils. Appl Soil Ecol 31:11–19
O’dor P, Standovar T (2002) Substrate specificity and community structure of bryophyte vegetation in a near-natural montane beech forest. Community Ecol 3:39–49. doi:10.1556/ComEc.3.2002.1.5
O’dor P, Heilmann-Clausen J, Christensen M, Aude E, van Dort KW, Piltaver A, Siller I, Veerkamp MT, Walleyn R, Standovar T, van Hees AFM, Kosec J, Matocec N, Kraigher H, Grebenc T (2006) Diversity of dead wood inhabiting fungi and bryophytes in semi-natural beech forests in Europe. Biol Conserv 131:58–71. doi:10.1016/j.biocon.2006.02.004
Peach M (1950) Aquatic predacious fungi I. Trans Br Mycol Soc 33:148–153
Peach M (1952) Aquatic predacious fungi. II. Trans Br Mycol Soc 35:19–23
Peach M (1954) Aquatic predaceous fungi III. Trans Br Mycol Soc 37:240
Persmark L, Jansson H-B (1997) Nematophagous fungi in the rhizosphere of agricultural crops. FEMS Microbiol Ecol 22:303–312. doi:10.1111/j.1574-6941.1997.tb00382.x
Peterson EA, Katznelson H (1964) Occurence of nematode-trapping fungi in the rhizosphere. Nature 204:111–112. doi:10.1038/2041111b0
Pfister DH (1994) Orbilia fimicola, a nematophagous discomycete and its Arthrobotrys anamorph. Mycologia 86:451–453. doi:10.2307/3760578
Pfister DH (1997) Castor, Pollux and life histories of fungi. Mycologia 89:1–23. doi:10.2307/3761168
Pfister DH, Liftik ME (1995) Two Arthrobotrys anamorphs from Orbilia auricolor. Mycologia 87:684–688. doi:10.2307/3760812
Poon MOK, Hyde KD (1998) Biodiversity of intertidal estuarine fungi on Phragmites at Mai Po marshes, Hong Kong. Bot Mar 41:141–155
Rohde CA (1976) Composite sampling. Biometrics 32:273–282. doi:10.2307/2529498
Seena S, Wynberg N, Barlocher F (2008) Fungal diversity during the leaf decomposition in a stream assessed through clone libraries. Fungal Divers 30:1–14
Shannon CE, Weaver W (1963) The mathematical theory of communications, 1st edn. University of Illionois Press, Urbana
Shearer CA, Descals E, Kohlmeyer B, Kohlmeyer J, Marvanová L, Padgett D et al (2007) Fungal biodiversity in aquatic habitats. Biodivers Conserv 16:49–67. doi:10.1007/s10531-006-9120-z
Simpson EH (1949) Measurement of diversity. Nature 163:688. doi:10.1038/163688a0
Sin KW, Hyde KD, Pointing SB (2002) Comparative enzyme production by fungi from diverse lignocellulosic substrates. J Microbiol Korea 40:241–244
Somerfield PJ, Yodnarasri S, Aryuthaka C (2002) Relationships between seagrass biodiversity and infaunal communities: implications for studies of biodiversity effects. Mar Ecol Prog Ser 237:97–109. doi:10.3354/meps237097
Thorn RG, Barron GL (1984) Carnivorous mushrooms. Science 224:76–78. doi:10.1126/science.224.4644.76
Tietjen JH, Alongi DM (1990) Population growth and effects of nematodes on nutrient regeneration and bacteria associated with mangrove detritus from northeastern Queensland (Australia). Mar Ecol Prog Ser 68:169–179. doi:10.3354/meps068169
Tsui CKM, Hyde KD, Hodgkiss IJ (2000) Biodiversity of fungi on submerged wood in Hong Kong streams. Aquat Microb Ecol 21:289–298. doi:10.3354/ame021289
Tsui CKM, Hyde KD, Fukushima K (2003) Fungi on submerged wood in the Koito River, Japan. Mycosci 44:55–59
Vijaykrishna D, Jeewon R, Hyde KD (2006) Molecular taxonomy, origins and evolution of freshwater ascomycetes. Fungal Divers 23:351–390
Wai HH, Hyde KD, Hodgkiss IJ, Yanna (2001) Fungal communities on submerged wood from streams in Brunei, Hong Kong, and Malaysia. Mycol Res 105:1492–1501. doi:10.1017/S095375620100507X
Wakelin SA, Macdonald LM, Rogers SL, Gregg AL, Bolger TP, Baldock JA (2008) Habitat selective factors influencing the structural composition and functional capacity of microbial communities in agricultural soils. Soil Biol Biochem 40:803–813. doi:10.1016/j.soilbio.2007.10.015
Webster J, Henrici A, Spooner B (1998) Orbilia fimicoloides sp. nov., the teleomorph of Dactylella cf. oxyspora. Mycol Res 102:99–102. doi:10.1017/S0953756297004747
Whitford WG (1996) The importance of the biodiversity of soil biota in arid ecosystems. Biodivers Conserv 5:185–195. doi:10.1007/BF00055829
Wong MKM, Goh TK, Hodgkiss IJ, Hyde KD, Ranghoo VM, Tsui CKM et al (1998) Role of fungi in freshwater ecosystems. Biodivers Conserv 7:1187–1206. doi:10.1023/A:1008883716975
Yu Z, Qiao M, Zhang Y, Baral HO, Zhang KQ (2007a) Orbilia vermiformis sp. nov. and its anamorph. Mycotaxon 99:271–278
Yu ZF, Zhang Y, Qiao M, Zhang KQ (2007b) Orbilia dorsalia sp nov., the teleomorph of Dactylella dorsalia sp nov. Cryptogam Mycol 28:55–63
Zhang ZN, Zhou H (2003) The systematics of free-living marine nematodes. J Ocean Univ Qingdao 33:891–900
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We would like to thank Dr. Lau Chun Pong for his generosity in sharing knowledge in statistics. Helen Leung is thanked for technical assistance. The University of Hong Kong is thanked for providing fund, a doctoral studentship.
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Swe, A., Jeewon, R., Pointing, S.B. et al. Diversity and abundance of nematode-trapping fungi from decaying litter in terrestrial, freshwater and mangrove habitats. Biodivers Conserv 18, 1695–1714 (2009). https://doi.org/10.1007/s10531-008-9553-7
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DOI: https://doi.org/10.1007/s10531-008-9553-7