Skip to main content

Advertisement

Log in

Molecular characterization, expression and chromosomal localization of porcine PNPLA3 and PNPLA4

  • Original Research Paper
  • Published:
Biotechnology Letters Aims and scope Submit manuscript

Abstract

Patatin-like phospholipases (PNPLAs) comprise a protein family whose members contain a conserved patatin-like domain with lipid acyl hydrolase activity. The cloning and characterization of full-length cDNAs of PNPLA3 and PNPLA4 in pigs is reported and, for the first time, an alternative splicing variant of porcine PNPLA4, which skips exon 5 of the normal transcript, was identified. Subsequently, tissue expression analysis by quantitative PCR indicated that porcine PNPLA3 was mainly expressed in both adipose and liver whereas porcine PNPLA4 was abundant in liver. Porcine PNPLA3 and PNPLA4 were assigned respectively to chromosome 5p11-p15 and Xp24.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5

Similar content being viewed by others

References

  • Baulande S, Lasnier F, Lucas M, Pairault J (2001) Adiponutrin, a transmembrane protein corresponding to a novel dietary- and obesity-linked mRNA specifically expressed in the adipose lineage. J Biol Chem 276:33336–33344

    Article  PubMed  CAS  Google Scholar 

  • Dai LH, Xiong YZ, Jiang SW, Chen JF (2010) Molecular characterization and association analysis of porcine adipose triglyceride lipase (PNPLA2) gene. Mol Biol Rep 37:1363–1371

    Google Scholar 

  • Gao J, Simon M (2005) Identification of a novel keratinocyte retinyl ester hydrolase as a transacylase and lipase. J Invest Dermatol 124:1259–1266

    Article  PubMed  CAS  Google Scholar 

  • Gao JG, Simon M (2007) A comparative study of human GS2, its paralogues, and its rat orthologue. Biochem Biophys Res Commun 360:501–506

    Article  PubMed  CAS  Google Scholar 

  • Gao JG, Shih A, Gruber R, Schmuth M, Simon M (2009) GS2 as a retinol transacylase and as a catalytic dyad independent regulator of retinylester accretion. Mol Genet Metab 96:253–260

    Article  PubMed  CAS  Google Scholar 

  • Gauguier D, Froguel P, Parent V, Bernard C, Bihoreau MT, Portha B, James MR, Penicaud L, Lathrop M, Ktorza A (1996) Chromosomal mapping of genetic loci associated with non-insulin dependent diabetes in the GK rat. Nat Genet 12:38–43

    Article  PubMed  CAS  Google Scholar 

  • Ghosh S, Watanabe RM, Valle TT, Hauser ER, Magnuson VL, Langefeld CD, Ally DS, Mohlke KL, Silander K, Kohtamaki K, Chines P, Balow J Jr, Birznieks G, Chang J, Eldridge W, Erdos MR, Karanjawala ZE, Knapp JI, Kudelko K, Martin C, Morales-Mena A, Musick A, Musick T, Pfahl C, Porter R, Rayman JB (2000) The Finland-United States investigation of non-insulin-dependent diabetes mellitus genetics (FUSION) study. I. An autosomal genome scan for genes that predispose to type 2 diabetes. Am J Hum Genet 67:1174–1185

    PubMed  CAS  Google Scholar 

  • Goureau A, Yerle M, Schmitz A, Riquet J, Milan D, Pinton P, Frelat G, Gellin J (1996) Human and porcine correspondence of chromosome segments using bidirectional chromosome painting. Genomics 36:252–262

    Article  PubMed  CAS  Google Scholar 

  • Jenkins CM, Mancuso DJ, Yan W, Sims HF, Gibson B, Gross RW (2004) Identification, cloning, expression, and purification of three novel human calcium-independent phospholipase A2 family members possessing triacylglycerol lipase and acylglycerol transacylase activities. J Biol Chem 279:48968–48975

    Article  PubMed  CAS  Google Scholar 

  • Johansson LE, Hoffstedt J, Parikh H, Carlsson E, Wabitsch M, Bondeson AG, Hedenbro J, Tornqvist H, Groop L, Ridderstrale M (2006) Variation in the adiponutrin gene influences its expression and associates with obesity. Diabetes 55:826–833

    Article  PubMed  CAS  Google Scholar 

  • Johansson LE, Lindblad U, Larsson CA, Rastam L, Ridderstrale M (2008) Polymorphisms in the adiponutrin gene are associated with increased insulin secretion and obesity. Eur J Endocrinol 159:577–583

    Article  PubMed  CAS  Google Scholar 

  • Kershaw EE, Hamm JK, Verhagen LA, Peroni O, Katic M, Flier JS (2006) Adipose triglyceride lipase: function, regulation by insulin, and comparison with adiponutrin. Diabetes 55:148–157

    Article  PubMed  CAS  Google Scholar 

  • Kienesberger PC, Oberer M, Lass A, Zechner R (2009) Mammalian patatin domain containing proteins: a family with diverse lipolytic activities involved in multiple biological functions. J Lipid Res 50 Suppl:S63–S68

    PubMed  Google Scholar 

  • Lake AC, Sun Y, Li JL, Kim JE, Johnson JW, Li D, Revett T, Shih HH, Liu W, Paulsen JE, Gimeno RE (2005) Expression, regulation, and triglyceride hydrolase activity of Adiponutrin family members. J Lipid Res 46:2477–2487

    Article  PubMed  CAS  Google Scholar 

  • Lee WC, Salido E, Yen PH (1994) Isolation of a new gene GS2 (DXS1283E) from a CpG island between STS and KAL1 on Xp22.3. Genomics 22:372–376

    Article  PubMed  CAS  Google Scholar 

  • Mignery GA, Pikaard CS, Hannapel DJ, Park WD (1984) Isolation and sequence analysis of cDNAs for the major potato tuber protein, patatin. Nucleic Acids Res 12:7987–8000

    Article  PubMed  CAS  Google Scholar 

  • Polson DA, Thompson MP (2003) Adiponutrin mRNA expression in white adipose tissue is rapidly induced by meal-feeding a high-sucrose diet. Biochem Biophys Res Commun 301:261–266

    Article  PubMed  CAS  Google Scholar 

  • Polson DA, Thompson MP (2004) Macronutrient composition of the diet differentially affects leptin and adiponutrin mRNA expression in response to meal feeding. J Nutr Biochem 15:242–246

    Article  PubMed  CAS  Google Scholar 

  • Romeo S, Kozlitina J, Xing C, Pertsemlidis A, Cox D, Pennacchio LA, Boerwinkle E, Cohen JC, Hobbs HH (2008) Genetic variation in PNPLA3 confers susceptibility to nonalcoholic fatty liver disease. Nat Genet 40:1461–1465

    Article  PubMed  CAS  Google Scholar 

  • Rydel TJ, Williams JM, Krieger E, Moshiri F, Stallings WC, Brown SM, Pershing JC, Purcell JP, Alibhai MF (2003) The crystal structure, mutagenesis, and activity studies reveal that patatin is a lipid acyl hydrolase with a Ser-Asp catalytic dyad. Biochemistry 42:6696–6708

    Article  PubMed  CAS  Google Scholar 

  • Saarela J, Jung G, Hermann M, Nimpf J, Schneider WJ (2008) The patatin-like lipase family in Gallus gallus. BMC Genomics 9:281

    Article  PubMed  Google Scholar 

  • Schrag JD, Cygler M (1997) Lipases and alpha/beta hydrolase fold. Methods Enzymol 284:85–107

    Article  PubMed  CAS  Google Scholar 

  • Shan T, Wang Y, Wu T, Guo J, Liu J, Feng J, Xu Z (2008) Porcine adipose triglyceride lipase complementary deoxyribonucleic acid clone, expression pattern, and regulation by resveratrol. J Anim Sci 86:1781–1788

    Article  PubMed  CAS  Google Scholar 

  • Steinberg GR, Kemp BE, Watt MJ (2007) Adipocyte triglyceride lipase expression in human obesity. Am J Physiol Endocrinol Metab 293:E958–E964

    Article  PubMed  CAS  Google Scholar 

  • Wilson PA, Gardner SD, Lambie NM, Commans SA, Crowther DJ (2006) Characterization of the human patatin-like phospholipase family. J Lipid Res 47:1940–1949

    Article  PubMed  CAS  Google Scholar 

  • Yerle M, Pinton P, Robic A, Alfonso A, Palvadeau Y, Delcros C, Hawken R, Alexander L, Beattie C, Schook L, Milan D, Gellin J (1998) Construction of a whole-genomeradiation hybrid panel for high-resolution gene mapping in pigs. Cytogenet Cell Genet 82:182–188

    Article  PubMed  CAS  Google Scholar 

Download references

Acknowledgments

We are grateful to Dr. Martine Yerle and Denis Milan (INRA, Castanet-Tolosan, France) for kindly providing the RH panel. This work was supported by the grants from Major Projects of National Science and Technology (2009ZX08009-151B), 973 Programme (2006CB102100), 863 Programme (2008AA10Z134, 2006AA10Z140), High Education Doctorial Subject Research Programme (20060504016), General Programme (30771585) and Key Programe of National Natural Science Foundation of China.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Zaiqing Yang.

Additional information

Zhilong Chen and Xin Gao contributed equally to this work.

Electronic supplementary material

Below is the link to the electronic supplementary material.

Supplementary material 1 (DOC 31 kb)

Rights and permissions

Reprints and permissions

About this article

Cite this article

Chen, Z., Gao, X., Lei, T. et al. Molecular characterization, expression and chromosomal localization of porcine PNPLA3 and PNPLA4 . Biotechnol Lett 33, 1327–1337 (2011). https://doi.org/10.1007/s10529-011-0591-y

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10529-011-0591-y

Keywords

Navigation