Skip to main content
Log in

Loop-mediated isothermal amplification for rapid detection of Bacillus anthracis spores

  • Original Research Paper
  • Published:
Biotechnology Letters Aims and scope Submit manuscript

Abstract

A loop-mediated isothermal amplification (LAMP) assay system was employed for detecting Bacillus anthracis spores in pure cultures as well as in various simulated powder samples. The specificity of the designed LAMP primer sets was validated by assaying 13 B. anthracis strains and 33 non-B. anthracis species. The detection limits of the LAMP assay were 10 spores/tube for pure cultures and 100 spores/2 mg powder for simulated powder samples. The results show that the LAMP protocol is a promising method for detecting B. anthracis.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4

Similar content being viewed by others

References

  • Baeumner AJ, Pretz J, Fang S (2004) A universal nucleic acid sequence biosensor with nanomolar detection limits. Anal Chem 76:888–894

    Article  PubMed  CAS  Google Scholar 

  • Belgrader P, Hansford D, Kovacs GT, Venkateswaran K, Mariella R Jr, Milanovich F, Nasarabadi S, Okuzumi M, Pourahmadi F, Northrup MA (1999) A minisonicator to rapidly disrupt bacterial spores for DNA analysis. Anal Chem 71:4232–4236

    Article  PubMed  CAS  Google Scholar 

  • Coker PR, Smith KL, Fellows PF, Rybachuck G, Kousoulas KG, Hugh-Jones ME (2003) Bacillus anthracis virulence in Guinea pigs vaccinated with anthrax vaccine adsorbed is linked to plasmid quantities and clonality. J Clin Microbiol 41:1212–1218

    Article  PubMed  CAS  Google Scholar 

  • Drago L, Lombardi A, Vecchi ED, Gismondo MR (2002) Real-time PCR assay for rapid detection of Bacillus anthracis spores in clinical samples. J Clin Microbiol 40:4399

    Article  PubMed  CAS  Google Scholar 

  • Edwards KA, Clancy HA, Baeumner AJ (2006) Bacillus anthracis: toxicology, epidemiology and current rapid-detection methods. Anal Bioanal Chem 384:73–84

    Article  PubMed  CAS  Google Scholar 

  • Endo S, Komori T, Ricci G, Sano A, Yokoyama K, Ohori A, Kamei K, Franco M, Miyaji M, Nishimura K (2004) Detection of gp43 of Paracoccidioides brasiliensis by the loop-mediated isothermal amplification (LAMP) method. FEMS Microbiol Lett 234:93–97

    Article  PubMed  CAS  Google Scholar 

  • Hoffmaster AR, Meyer RF, Bowen MD, Marston CK, Weyant RS, Thurman K, Messenger SL, Minor EE, Winchell JM, Rassmussen MV, Newton BR, Parker JT, Morrill WE, McKinney N, Barnett GA, Sejvar JJ, Jernigan JA, Perkins BA, Popovic T (2002) Evaluation and validation of a real-time polymerase chain reaction assay for rapid identification of Bacillus anthracis. Emerg Infect Dis 8:1178–1182

    PubMed  CAS  Google Scholar 

  • Iwamoto T, Sonobe T, Hayashi K (2003) Loop-mediated isothermal amplification for direct detection of Mycobacterium tuberculosis complex, M. avium, and M. intracellulare in sputum samples. J Clin Microbiol 41:2616–2622

    Article  PubMed  CAS  Google Scholar 

  • Makino S, Cheun HI (2003) Application of the real-time PCR for the detection of airborne microbial pathogens in reference to the anthrax spores. J Microbiol Methods 53:141–147

    Article  PubMed  CAS  Google Scholar 

  • Notomi T, Okayama H, Masubuchi H, Yonekawa T, Watanabe K, Amino N, Hase T (2000) Loop-mediated isothermal amplification of DNA. Nucleic Acids Res 28:E63

    Article  PubMed  CAS  Google Scholar 

  • Okafuji T, Yoshida N, Fujino M, Motegi Y, Ihara T, Ota Y, Notomi T, Nakayama T (2005) Rapid diagnostic method for detection of mumps virus genome by loop-mediated isothermal amplification. J Clin Microbiol 43:1625–1631

    Article  PubMed  CAS  Google Scholar 

  • Phillips AP, Martin KL (1983) Quantitative immunofluorescence studies of the serology of Bacillus anthracis spores. Appl Environ Microbiol 46:1430–1432

    PubMed  CAS  Google Scholar 

  • Phillips AP, Martin KL, Horton WH (1984) The choice of methods for immunoglobulin IgG purification: yield and purity of antibody activity. J Immunol Methods 74:385–393

    Article  PubMed  CAS  Google Scholar 

  • Ramisse V, Patra G, Vaissaire J, Mock M (1999) The Ba813 chromosomal DNA sequence effectively traces the whole Bacillus anthracis community. J Appl Microbiol 87:224–228

    Article  PubMed  CAS  Google Scholar 

  • Redmond C, Pearce MJ, Manchee RJ, Berdal BP (1998) Deadly relic of the Great War. Nature 393:747–748

    Article  PubMed  CAS  Google Scholar 

  • Reif TC, Johns M, Pillai SD, Carl M (1994) Identification of capsule-forming Bacillus anthracis spores with the PCR and a novel dual-probe hybridization format. Appl Environ Microbiol 60:1622–1625

    PubMed  CAS  Google Scholar 

  • Stopa PJ (2000) The flow cytometry of Bacillus anthracis spores revisited. Cytometry 41:237–244

    PubMed  CAS  Google Scholar 

  • Wang JY, Roehrl MH (2005) Anthrax vaccine design: strategies to achieve comprehensive protection against spore, bacillus, and toxin. Med Immunol 4:4

    Article  PubMed  Google Scholar 

  • Wang SH, Wen JK, Zhou YF, Zhang ZP, Yang RF, Zhang JB, Chen J, Zhang XE (2004) Identification and characterization of Bacillus anthracis by multiplex PCR on DNA chip. Biosens Bioelectron 20:807–813

    PubMed  CAS  Google Scholar 

  • WHO (2003) Guidelines for the surveillance and control of anthrax in humans and animals [monograph on the Internet]. World Health Organization, Geneva

Download references

Acknowledgements

This work was supported by the Chinese Academy of Sciences. We thank Dr. Zhiming Yuan for providing Bacillus cereus strains.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Xian-En Zhang.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Qiao, YM., Guo, YC., Zhang, XE. et al. Loop-mediated isothermal amplification for rapid detection of Bacillus anthracis spores. Biotechnol Lett 29, 1939–1946 (2007). https://doi.org/10.1007/s10529-007-9472-9

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10529-007-9472-9

Keywords

Navigation