Abstract
A new method for the selection of Pichia stipitis and Hansenula polymorpha yeast mutants with altered capability to ferment xylose to ethanol was developed. The method is based on the ability of P. stipitis and H. polymorpha colonies to grow and produce ethanol on agar plates with xylose as the sole carbon and energy source. Secreted ethanol, in contrast to xylose, supports growth of cells of the indicator xylose-negative strains (the wild-type strain of Saccharomyces cerevisiae or Δxyl1 mutant of H. polymorpha) mixed with agar medium. The size of the tester culture-growth zone around xylose-grown colonies appeared to be dependent on the amount of secreted ethanol. Mutants with altered (decreased or elevated) ethanol production in xylose medium have been isolated using this method. The mutants exhibited pleiotropic alterations in enzymatic activities of the intermediary xylose metabolism.
Similar content being viewed by others
References
Aristidou A, Penttila M (2000) Metabolic engineering applications to renewable resource utilization. Curr Opin Biotechnol 11:187–198
Banerjee S, Fraenkel DG (1972) Glucose-6-phosphate dehydrogenase from Escherichia coli and from a “high-level” mutant. J Bacteriol 110:156–160
Bergmeyer H-U, Gawehn K, Grassl M (1974) Enzymes as biochemical reagents. In: Bergmeyer H-U (eds) Methods of enzymatic analysis. Academic, New York 1:428–429
van Dijk R, Faber KN, Hammond AT, Glick BS, Veenhuis M, Kiel JA (2001) Tagging Hansenula polymorpha genes by random integration of linear DNA fragments (RALF). Mol Genet Genomics 266:646–656
Engel M, Seifert M, Theisinger B, Welter C, Seyfert U (1998) Glyceraldehyde-3-phosphate dehydrogenase and Nm23-H1/nucleoside diphosphate kinase A. Two old enzymes combine for the novel Nm23 protein phosphotransferase function. J Biol Chem 273:20058–20065
Gonchar MV, Maidan MM, Sibirny AA (2001) A new oxidase-peroxidase kit “Alcotest” for ethanol assays in alcoholic beverages. Food Technol Biotechnol 39:37–42
Hahn-Hagerdal B, Wahlbom CF, Gardonyi M, van Zyl WH, Cordero Otero RR, Jonsson LJ (2001) Metabolic engineering of Saccharomyces cerevisiae for xylose utilization. Adv Biochem Eng Biotechnol 73:53–84
Ho NW, Chen Z, Brainard AP, Sedlak M (1999) Successful design and development of genetically engineered Saccharomyces yeasts for effective cofermentation of glucose and xylose from cellulosic biomass to fuel ethanol. Adv Biochem Eng Biotechnol 65:163–192
Jeffries TW, Jin YS (2004) Metabolic engineering for an improved fermentation of pentoses by yeasts. Appl Microbiol Biotechnol 63:495–509
Jeppsson M, Johansson B, Hahn-Hagerdal B, Gorwa-Grauslund MF (2002) Reduced oxidative pentose phosphate pathway flux in recombinant xylose-utilizing Saccharomyces cerevisiae strains improves the ethanol yield from xylose. Appl Environ Microbiol 68:1604–1609
Kötter P, Ciriacy M (1993) Xylose fermentation by Saccharomyces cerevisiae. Appl Microbiol Biotechnol 38:776–783
Kramarenko T, Karp H, Jarviste A, Alamae T (2000) Sugar repression in the methylotrophic yeast Hansenula polymorpha studied by using hexokinase-negative, glucokinase-negative and double kinase-negative mutants. Folia Microbiol 45:521–529
Kuyper M, Toirkens MJ, Diderich JA, Winkler AA, van Dijken JP, Pronk JT (2005) Evolutionary engineering of mixed-sugar utilization by a xylose-fermenting Saccharomyces cerevisiae strain. FEMS Yeast Res 5:925–934
Lahtchev KL, Semenova VD, Tolstorukov II, van der Klei I, Veenhuis M (2002) Isolation and properties of genetically defined strains of the methylotrophic yeast Hansenula polymorpha CBS 4732. Arch Microbiol 177:150–158
Lowry OH, Rosebrough NJ, Farr AL, Randall RJ (1951) Protein measurement with the Folin phenol reagent. J Biol Chem 193:265–275
Morimoto S, Matsuo M, Azuma K, Sinskey AJ (1986) Purification and properties of D-xylulose reductase from Pachysolen tannophilus. J Ferment Biotechnol 64:219–225
Peters BA, Neet KE (1978) Yeast hexokinase PII. Conformation changes induced by substrates and substrate analogues. J Biol Chem 253:6826–6831
Petschacher B, Leitgeb S, Kavanagh KL, Wilson DK, Nidetzky B (2005) The coenzyme specificity of Candida tenuis xylose reductase (AKR2B5) explored by site-directed mutagenesis and X-ray crystallography. Biochem J 385:75–83
du Preez JC, Bosch M, Prior BA (1986) Xylose fermentation by Candida shehatae and Pichia stipitis—effects of pH, temperature and substrate concentration. Enzyme Microb Technol 8:360–364
Ramezani-Rad M, Hollenberg CP, Lauber J, Wedler H, Griess E, Wagner C, Albermann K, Hani J, Piontek M, Dahlems U, Gellissen G (2003) The Hansenula polymorpha (strain CBS4732) genome sequencing and analysis. FEMS Yeast Res 4:207–215
Ryabova OB, Chmil OM, Sibirny AA (2003) Xylose and cellobiose fermentation to ethanol by the thermotolerant methylotrophic yeast Hansenula polymorpha. FEMS Yeast Res 4:157–164
Shi NQ, Davis B, Sherman F, Cruz J, Jeffries TW (1999) Disruption of the cytochrome c gene in xylose-utilizing yeast Pichia stipitis leads to higher ethanol production. Yeast 15:1021–1030
Simpson FJ (1966) D-xylulokinase. Meth Enzymol 9:454–458
Traff KL, Otero Cordero RR, van Zyl WH, Hahn-Hagerdal B (2001) Deletion of the GRE3 aldose reductase gene and its influence on xylose metabolism in recombinant strains of Saccharomyces cerevisiae expressing the xylA and XKS1 genes. Appl Environ Microbiol 67:5668–5674
Tsolas O, Joris L (1975) Transaldolase. Meth Enzymol 42:290–297
Verduyn C, Van Kleef R, Frank J, Schreuder H, Van Dijken JP, Scheffers WA (1985) Properties of the NAD(P)H-dependent xylose reductase from the xylose-fermenting yeast Pichia stipitis. Biochem J 226:669–677
Voronovsky AY, Ryabova OB, Verba OV, Ishchuk OP, Dmytruk KV, Sibirny AA (2005) Expression of xylA genes encoding xylose isomerases from Escherichia coli and Streptomyces coelicolor in the methylotrophic yeast Hansenula polymorpha. FEMS Yeast Res 5:1055–1062
Wolf K (1996) Nonconventional yeasts in biotechnology. Springer, Berlin, Heidelberg New York
Zaldivar J, Nielsen J, Olsson L (2001) Fuel ethanol production from lignocellulose: a challenge for metabolic engineering and process integration. Appl Microbiol Biotechnol 56:17–34
Acknowledgments
Authors are grateful to Dr. O.V. Stasyk for critical reading the manuscript and to Mrs B.V. Kshanovska (both from Institute of Cell Biology, NAS of Ukraine, Lviv) for participation in isolation of H. polymorpha mutants. The work was supported in part by the Polish National research grant KBN 3 PO4B 003 23 and the INTAS grant Nr 05-1000005-7730.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Grabek-Lejko, D., Ryabova, O.B., Oklejewicz, B. et al. Plate ethanol-screening assay for selection of the Pichia stipitis and Hansenula polymorpha yeast mutants with altered capability for xylose alcoholic fermentation. J Ind Microbiol Biotechnol 33, 934–940 (2006). https://doi.org/10.1007/s10295-006-0147-7
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s10295-006-0147-7