Phylogenetic analysis of Theobroma (Sterculiaceae) based on Kunitz-like trypsin inhibitor sequences

Abstract.

Trypsin inhibitor gene sequences were used to investigate the phylogenetic relationships among Theobroma and Herrania species, considered as sister-groups, with particular interest on the monophyly and infra-generic relationships of Theobroma. The presumed amino acid sequences of 23 analyzed samples, from 11 Theobroma and three Herrania species, comprising all sections from both genera, demonstrated a high similarity with a previously characterized T. cacao Kunitz trypsin inhibitor. The trypsin inhibitor gene accumulated mutations at faster rate than prior analyzed nuclear or chloroplastic genes. None of the sequences presented introns. The phylogeny of the trypsin inhibitor sequences was congruent with the phylogenetic hypotheses of the Theobroma and Herrania species based on morphology. The monophyly of Theobroma was not strongly supported, corroborating previously described absence of obvious synapomorphies for Theobroma. The species grouped consistently according to genus and section. The monophyly of all Theobroma sections was supported, except for section Glossopetalum, which was paraphyletic to section Andropetalum. Evidences sustain that T. mammosum may be included into section Glossopetalum. The potential use of trypsin inhibitor gene sequences in phylogenetic studies of Theobroma was demonstrated.