Skip to main content
Log in

Cloning of the astaxanthin synthase gene from Xanthophyllomyces dendrorhous (Phaffia rhodozyma) and its assignment as a β-carotene 3-hydroxylase/4-ketolase

  • Original Paper
  • Published:
Molecular Genetics and Genomics Aims and scope Submit manuscript

Abstract

A gene has been cloned from Xanthophyllomyces dendrorhous by complementation of astaxanthin formation in a β-carotene accumulating mutant. It consists of 3,166 bp and contains 17 introns. For the β-carotene mutant ATCC 96815, a single point mutation in the splicing sequence of intron 8 was found. The resulting improper splicing of the mRNA results in an inactive protein. The cDNA of this β-carotene oxygenase encodes a cytochrome P450 monooxygenase belonging to the 3A subfamily. P450-specific domains were identified including a cytochrome P450 and an oxygen binding motif. Electrons are provided by a cytochrome P450 reductase. Functional characterization of the enzyme by genetic modification of X. dendrorhous demonstrated that this P450 monooxygenase is multifunctional catalyzing all steps from β-carotene to astaxanthin formation by oxygenation of carbon 3 and 4. The reaction sequence is first 4-ketolation of β-carotene followed by 3-hydroxylation. A hydroxylation mechanism at allylic carbon atoms has been proposed for the generation of 4-keto and 3-hydroxy groups at both β-ionone ends.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6
Fig. 7

Similar content being viewed by others

References

  • An GH, Johnson E (1990) Influence of light on growth and pigmentation of the yeast Pfaffia rhodozyma. Antonie van Leeuwenhoek 57:191–203

    Article  PubMed  CAS  Google Scholar 

  • An GH, Bielich J, Auerbach R, Johnson EA (1991) Isolation and characterization of carotenoid hyperproducing mutants of yeast by flow cytometry and cell cortin. BioTechnol 9:70–73

    Article  CAS  Google Scholar 

  • Andrewes AG, Starr MP (1976) (3R.3′R)-Astaxanthin from yeast Phaffia rhodozyma. Phytochem 15:1009–1011

    Article  CAS  Google Scholar 

  • Andrewes AG, Phaff HJ, Starr MR (1976) Carotenoids of Phaffia rhodozyma, a red-pigmented fermenting yeast. Phytochem 15:1003–1007

    Article  CAS  Google Scholar 

  • Blasco F, Kauffmann I, Schmidt RD (2004) CYP175A1 from Thermus thermophilus HB27, the first β-carotene hydroxylase of the P450 superfamily. Appl Micobiol Biotechnol 64:671–674

    Article  CAS  Google Scholar 

  • Breitenbach J, Misawa N, Kajiwara S, Sandmann G (1996) Expression in Escherichia coli and properties of the carotene ketolase from Haematococcus pluvialis. FEMS Microbiol Lett 140:241–246

    Article  PubMed  CAS  Google Scholar 

  • Britton G (1988) Biosynthesis of carotenoids. In: Goodwin T (eds) Plant pigments. Academic, London pp 133–138

    Google Scholar 

  • Bouvier F, Keller Y, d’Harlinguer A, Camara C (1998) Xanthophyll biosynthesis: molecular and functional characterization of carotenoid hydroxylases from pepper fruits (Capsicum annuum L.). Biochim Biophys Acta 1391:320–328

    PubMed  CAS  Google Scholar 

  • Cunningham FX, Gantt E (2005) A study in scarlet: enzymes of ketocarotenoid biosynthesis in the flowers of Adonis aestivalis. Plant J 41:478–492

    Article  PubMed  CAS  Google Scholar 

  • Danielson P, MacIntyre R, Fogleman J (1997) Molecular cloning of a family of xenobiotic-inducible drosophilid cytochrome P450s: evidence for involvement in host-plant allelochemical resistance. Proc Natl Acad Sci USA 94:10797–10802

    Article  PubMed  CAS  Google Scholar 

  • Girard P, Falconnier B, Bricout J, Vladescu B (1994) β-Carotene producing mutants of Phaffia rhodozyma. Appl Microbiol Biotechnol 41:183–191

    Article  CAS  Google Scholar 

  • Golubev WI (1995) Perfect state of Rhodomyces dendrorhous (Phaffia rhodozyma). Yeast 11:101–110

    Article  PubMed  CAS  Google Scholar 

  • Gotoh O, Fujii-Kuriyama Y (1989) Evolution, structure and gene regulation in cytochrome P-450. In: Ruckpaul K, Rein H (eds) Frontiers in biotransformation. Taylor and Francis, New York pp 195–243

    Google Scholar 

  • Guengerich FP, Martin MV, Guo Z, Chun Y (1996) Purification of functional recombinant P450s from bacteria. Methods Enzymol 272:35–44

    Article  PubMed  CAS  Google Scholar 

  • Hanna Z, Fregau C, Prefontaine G, Brousseau R (1984) Construction of a family of universal expression plasmid vectors. Gene 30:247–250

    Article  PubMed  CAS  Google Scholar 

  • Hoshino T, Ojima K, Setoguchi Y (2000) Astaxanthin synthase. Hoffman-LaRoche, European patent no. 1035206–A3

  • Johnson E, Gil-Hwan An (1991) Astaxanthin from microbial sources. Critical Rev Biotechnol 11:297–326

    Article  CAS  Google Scholar 

  • Johnston S, DeVit M (1996) Biolistic tranformation of yeasts. Methods Mol Biol 53:147–153

    PubMed  CAS  Google Scholar 

  • Kajiwara S, Kakizono T, Saito T, Kondo K, Ohtani T, Nishio N, Nagi S, Misawa N (1995) Isolation and functional identification of a novel cDNA for astaxanthin biosynthesis from Haematococcus pluvialis, and astaxanthin synthesis in Escherichia coli. Plant Mol Biol 29:343–352

    Article  PubMed  CAS  Google Scholar 

  • Kovach ME, Elzer PH, Hill DS, Robertson GT, Farris MA, Roop RM, Peterson M (1995) Four new derivatives of the broad-host range cloning vector pBBR1MCS, carrying different antibiotic resistance cassettes. Gene 166:175–176

    Article  PubMed  CAS  Google Scholar 

  • Masamoto K, Misawa N, Kaneko T, Kikuno R, Toh H (1998) ß-Carotene hydroxylase gene from the cyanobacterium Synechocystis sp. strainPCC6803. Plant Cell Physiol 39:560–564

    PubMed  CAS  Google Scholar 

  • Misawa N, Nakagawa M, Kobayashi K, Yamano S, Izawa Y, Nakamura K, Harashima K (1990) Elucidation of the Erwinia uredovora carotenoid biosynthetic pathway by functional analysis of gene products espressed in Escherichia coli. J Bacteriol 172:6704–6712

    PubMed  CAS  Google Scholar 

  • Misawa N, Kajiwara S, Kondo K, Yokoyama A, Satomi Y, Saito T, Miki W, Ohtani T (1995) Canthaxanthin biosynthesis by the conversion of methylene to keto groups, in a hydrocarbon β-carotene by a single gene. Biochem Biophy Res Commun 209:867–876

    Article  CAS  Google Scholar 

  • Sakaguchi M, Mihara K, Sato R (1987) A short amino-terminal segment of microsomal cytochrome P-450 functions both as an insertion signal and as a stop-transfer sequence. EMBO J 6:2425–2431

    PubMed  CAS  Google Scholar 

  • Sambrook J, Fritsch EF, Maniatis T (1989) Molecular cloning, a laboratory manual. Cold Spring Harbour Laboratory Press, New York

    Google Scholar 

  • Sandmann G (2002) Combinatorial biosynthesis of carotenoids in a heterologous host: a powerful approach for the biosynthesis of novel structures. Chem Biochem 3:629–635

    CAS  Google Scholar 

  • Sandmann G, Misawa N (2002) Fungal carotenoids. In: Osiewacz HD (ed) The Mycota X: industrial applications. Springer, Berlin, Heidelberg New York, pp 247–262

    Google Scholar 

  • Schroeder W, Johnson E (1995) Singlet oxygen and peroxyl radicals regulate carotenoid biosynthesis in Phaffia rhodozyma. J Biol Chem 270:18374–18379

    Article  PubMed  CAS  Google Scholar 

  • Steiger S, Schäfer L, Sandmann G (1999) High-light-dependent upregulation of carotenoids and their antioxidative properties in the cyanobacterium Synechocystis PCC 6803. J Photochem Photobiol B-Biol 52:14–18

    Article  CAS  Google Scholar 

  • Steiger S, Sandmann G (2004) Cloning of two carotenoid ketolase genes from Nostoc punctiforme for the heterologous production of canthaxanthin and astaxanthin. Biotechnol Lett 26:813–817

    Article  PubMed  CAS  Google Scholar 

  • Tian L, Musetti V, Kim J, Magallanes-Lundback M, DellaPenna D (2004) The Arabidopsis LUT1 locus encodes a member of the cytochrome P450 family that is required for carotenoid epsilon-ring hydroxylation activity. Proc Natl Acad Sci USA 101:402–407

    Article  PubMed  CAS  Google Scholar 

  • Verdoes JC, Krubasik KP, Sandmann G, van Ooyen AJ (1999a) Isolation and functional characterisation of a novel type of carotenoid biosynthetic gene from Xanthophyllomyces dendrorhous. Mol Gen Genet 262:453–61

    Article  CAS  Google Scholar 

  • Verdoes JC, Misawa N, van Ooyen AJJ (1999b) Cloning and characterization of the astaxanthin biosynthetic gene encoding phytoene desaturase of Xanthophyllomyces dendrorhous. Biotechnol Bioengin 63:750–755

    Article  CAS  Google Scholar 

  • Verdoes JC, Sandmann G, Visser H, Diaz M, van Mossel M, van Ooyen AJJ (2003) Metabolic engineering of the carotenoid biosynthetic pathway in the yeast Xanthophyllomyces dendrorhous (Phaffia rhodozyma). Appl Environ Microbiol 69:3728–3738

    Article  PubMed  CAS  Google Scholar 

  • Visser H, deBont JAM, Verdoes JC (1999) Isolation and characterization of the epoxide hydroxylase-encoding gene from Xanthophyllomyces dendrorhous. Appl Environ Microbiol 65:5459–5463

    PubMed  CAS  Google Scholar 

  • Visser H, Sandmann G, Verdoes JC (2005) Xanthophylls in fungi: metabolic engineering of the astaxanthin biosynthetic pathway in Xanthophyllomyces dendrorhous. In: Barredo J (eds) Methods in biotechnology Microbial processes and products. Totowa, NJ USA pp 257–272

    Google Scholar 

  • Yabusaki Y, Murakami H, Ohkawa H (1988) Primary structure of Saccharomyces cerevisiae NADPH-cytochrome P450 reductase deduced from nucleotide sequence of its cloned gene. J Biochem 103:1004–1010

    PubMed  CAS  Google Scholar 

Download references

Acknowledgements

This work was supported by grant QLK1-CT-2001-00780 from the European Commission.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Gerhard Sandmann.

Additional information

Communicated by P. Punt

Rights and permissions

Reprints and permissions

About this article

Cite this article

Ojima, K., Breitenbach, J., Visser, H. et al. Cloning of the astaxanthin synthase gene from Xanthophyllomyces dendrorhous (Phaffia rhodozyma) and its assignment as a β-carotene 3-hydroxylase/4-ketolase. Mol Genet Genomics 275, 148–158 (2006). https://doi.org/10.1007/s00438-005-0072-x

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00438-005-0072-x

Keywords

Navigation