Skip to main content
Log in

StCDPK2 expression and activity reveal a highly responsive potato calcium-dependent protein kinase involved in light signalling

  • Original Article
  • Published:
Planta Aims and scope Submit manuscript

Abstract

Calcium-dependent protein kinases (CDPKs) are essential calcium sensors. In this work, we have studied StCDPK2 isoform from potato both at gene and protein level. StCdpk2 genomic sequence contains eight exons and seven introns, as was observed for StCdpk1. There is one copy of the gene per genome located in chromosome 7. StCDPK2 encodes an active CDPK of 515 aminoacids, with an apparent MW of 57 kDa, which presents myristoylation and palmitoylation consensus in its N-terminus. StCDPK2 is highly expressed in leaves and green sprouts; enhanced expression was detected under light treatment, which corresponds well with light responsive cis-acting elements found in its promoter sequence. Antibodies against the recombinant StCDPK2::6xHis protein detected this isoform in soluble and particulate fractions from leaves. StCDPK2 autophosphorylation and kinase activity are both calcium dependent reaching half maximal activation at 0.6 μM calcium. The active kinase is autophosphorylated on serine and tyrosine residues and its activity is negatively modulated by phosphatidic acid (PA). Our results reveal StCDPK2 as a signalling element involved in plant growth and development and show that its activity is tightly regulated.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6
Fig. 7
Fig. 8
Fig. 9

Similar content being viewed by others

Abbreviations

ABA:

Absicic acid

CDPK:

Calcium-dependent protein kinase

DGPP:

Diacylglycerol pyrophosphate

JA:

Jasmonic acid

PA:

Phosphatidic acid

References

  • Andronis C, Barak S, Knowles SM, Sugano S, Tobin EM (2008) The clock protein CCA1 and the bZIP transcription factor HY5 physically interact to regulate gene expression in Arabidopsis. Mol Plant 1:58–67

    Article  CAS  PubMed  Google Scholar 

  • Arguello-Astorga G, Herrera-Estrella L (1998) Evolution of light-regulated plant promoters. Annu Rev Plant Physiol Plant Mol Biol 49:525–555

    Article  CAS  PubMed  Google Scholar 

  • Asano T, Tanaka N, Yang G, Hayashi N, Komatsu S (2005) Genome-wide identification of the rice calcium-dependent protein kinase and its closely related kinase gene families: comprehensive analysis of the CDPKs gene family in rice. Plant Cell Physiol 46:356–366

    Article  CAS  PubMed  Google Scholar 

  • Bachmann M, Shiraishi N, Campbell WH, Yoo BC, Harmon AC, Huber SC (1996) Identification of the major regulatory phosphorylation site as Ser-543 in spinach leaf nitrate reductase and its phosphorylation by a calcium-dependent protein kinase in vitro. Plant Cell 8:505–517

    Article  CAS  PubMed  Google Scholar 

  • Bonierbale MW, Plaisted RL, Pineda O, Tanksley SD (1994) QTL analysis of trichome-mediated insect resistance in potato. Theor Appl Genet 87:973–987

    Article  CAS  Google Scholar 

  • Chaudhuri S, Seal A, Gupta MD (1999) Autophosphorylation-dependent activation of a calcium-dependent protein kinase from groundnut. Plant Physiol 120:859–866

    Article  CAS  PubMed  Google Scholar 

  • Chen X, Lin WH, Wang Y, Luan S, Xue HW (2008) An inositol polyphosphate 5-phosphatase functions in PHOTOTROPIN1 signaling in Arabidopis by altering cytosolic Ca2+. Plant Cell 20:353–366

    Article  CAS  PubMed  Google Scholar 

  • Cheng S-H, Willmann MR, Chen H-C, Sheen J (2002) Calcium signaling through protein kinases. The Arabidopsis calcium-dependent protein kinase gene family. Plant Physiol 129:469–485

    Article  CAS  PubMed  Google Scholar 

  • Chico JM, Raíces M, Téllez-Iñón MT, Ulloa RM (2002) A calcium-dependent protein kinase is systemically induced upon wounding in tomato plants. Plant Physiol 128:256–270

    Article  CAS  PubMed  Google Scholar 

  • Choi HI, Park HJ, Park JH, Kim S, Im MY, Seo HH, Kim YW, Hwang I, Kim SY (2005) Arabidopsis calcium-dependent protein kinase AtCPK32 interacts with ABF4, a transcriptional regulator of abscisic acid-responsive gene expression, and modulates its activity. Plant Physiol 139:1750–1761

    Article  CAS  PubMed  Google Scholar 

  • Dyson HJ, Wright PE (2005) Elucidation of the protein folding landscape by NMR. Methods Enzymol 394:299–321

    Article  CAS  PubMed  Google Scholar 

  • Ellard-Ivey M, Hopkins RB, White TJ, Lomax TL (1999) Cloning, expression and N-terminal myristoylation of CpCPK1, a calcium-dependent protein kinase from zucchini (Cucurbita pepo L.). Plant Mol Biol 39:199–208

    Article  CAS  PubMed  Google Scholar 

  • Falquet L, Pagni M, Bucher P, Hulo N, Sigrist CJ, Hofmann K, Bairoch A (2002) The PROSITE database, its status in 2002. Nucleic Acids Res 30:235–238

    Article  CAS  PubMed  Google Scholar 

  • Farmer P, Choi J (1999) Calcium and phospholipid activation of a recombinant calcium-dependent protein kinase (DcCPK1) from carrot (Daucus carota L.). Biochim Biophys Acta 14:6–17

    Article  Google Scholar 

  • Feingold S, Lloyd J, Norero N, Bonierbale M, Lorenzen J (2005) Mapping and characterization of new EST-derived microsatellites for potato (Solanum tuberosum L.). Theor Appl Genet 111:456–466

    Article  CAS  PubMed  Google Scholar 

  • Gargantini PR, Gonzalez-Rizzo S, Chinchilla D, Raices M, Giammaria V, Ulloa RM, Frugier F, Crespi MD (2006) A CDPK isoform participates in the regulation of nodule number in Medicago truncatula. Plant J 48:843–856

    Article  CAS  PubMed  Google Scholar 

  • Gargantini PR, Giammaria V, Grandellis C, Feingold SE, Maldonado S, Ulloa RM (2009) Genomic and functional characterization of StCDPK1. Plant Mol Biol 70:153–172

    Article  CAS  PubMed  Google Scholar 

  • Gehring CA, Williams DA, Cody SH, Parish RW (1990) Phototropism and geotropism in maize coleoptiles are spatially correlated with increases in cytosolic free calcium. Nature 345:528–530

    Article  CAS  PubMed  Google Scholar 

  • Gidoni D, Brosio P, Bond-Nutter D, Bedbrook J, Dunsmuir P (1989) Novel cis-acting elements in Petunia Cab gene promoters. Mol Gen Genet 215:337–344

    Article  CAS  PubMed  Google Scholar 

  • Harada A, Shimazaki K (2007) Phototropins and blue light-dependent calcium signaling in higher plants. Photochem Photobiol 83:102–111

    Article  CAS  PubMed  Google Scholar 

  • Harmon AC (2003) Calcium-regulated protein kinases of plants. Gravit Space Biol Bull 16:83–90

    PubMed  Google Scholar 

  • Harmon AC, Gribskov M, Harper JF (2000) CDPKs-a kinase for every Ca2+ signal? Trends Plant Sci 5:154–159

    Article  CAS  PubMed  Google Scholar 

  • Harper JF, Binder BM, Sussman MR (1993) Calcium and lipid regulation of an Arabidopsis protein kinase expressed in Escherichia coli. Biochemistry 32:3282–3290

    Article  CAS  PubMed  Google Scholar 

  • Harper JF, Breton G, Harmon A (2004) Decoding Ca2+ signals through plant protein kinases. Annu Rev Plant Biol 55:263–288

    Article  CAS  PubMed  Google Scholar 

  • Harris N, Spence J, Oparka KJ (1994) Immunocytochemistry for light and electron microscopy. In: Harris N, Oparka KJ (eds) Plant cell biology: a practical approach. IRL Press at Oxford University Press, Oxford, pp 157–176

    Google Scholar 

  • Hein I, McLean K, Chalhoub B, Bryan G (2007) Generation and screening of a BAC library from a diploid potato clone to unravel durable late blight resistance on linkage group IV. Int J Plant Genomics (article ID 51421)

  • Hrabak EM, Chan CW, Gribskov M, Harper JF, Choi JH, Halford N, Kudla J, Luan S, Nimmo HG, Sussman MR, Thomas M, Walker-Simmons K, Zhu JK, Harmon AC (2003) The Arabidopsis CDPK-SnRK superfamily of protein kinases. Plant Physiol 132:666–680

    Article  CAS  PubMed  Google Scholar 

  • Ishida S, Yuasa T, Nakata M, Takahashi Y (2008) A tobacco calcium-dependent protein kinase, CDPK1, regulates the transcription factor REPRESSION OF SHOOT GROWTH in response to gibberellins. Plant Cell 20:3273–3288

    Article  CAS  PubMed  Google Scholar 

  • Ito T, Nakata M, Fukazawa J, Ishida S, Takahashi Y (2010) Alteration of substrate specificity: the variable N-terminal domain of tobacco Ca2+-dependent protein kinase is important for substrate recognition. Plant Cell 22:1592–1604

    Article  CAS  PubMed  Google Scholar 

  • Johnson CH, Knight MR, Kondo T, Masson P, Sedbrook J, Haley A, Trewavas A (1995) Circadian oscillations of cytosolic and chloroplastic free calcium in plants. Science 269:1863–1865

    Article  CAS  PubMed  Google Scholar 

  • Kim MC, Chung WS, Yun D-J, Cho MJ (2009) Calcium and calmodulin-mediated regulation of gene expression in plants. Mol Plant 2:13–21

    Article  CAS  PubMed  Google Scholar 

  • Klimecka M, Muszyńska G (2007) Structure and functions of plant calcium-dependent protein kinases. Acta Biochim Pol 54:219–233

    CAS  PubMed  Google Scholar 

  • Kobayashi M, Ohura I, Kawakita K, Yokota N, Fujiwara M, Shimamoto K, Doke N, Yoshioka H (2007) Calcium-dependent protein kinases regulate the production of reactive oxygen species by potato NADPH oxidase. Plant Cell 19:1065–1080

    Article  CAS  PubMed  Google Scholar 

  • Kooijman EE, Tieleman DP, Testerink C, Munnik T, Rijkers DT, Burger KN, de Kruijff B (2007) An electrostatic/hydrogen bond switch as the basis for the specific interaction of phosphatidic acid with proteins. J Biol Chem 282:11356–11364

    Article  CAS  PubMed  Google Scholar 

  • Kooijman EE, King KE, Gangoda M, Gericke A (2009) Ionization properties phosphatidylinositol polyphosphates in mixed model membranes. Biochemistry 48:9360–9371

    Article  CAS  PubMed  Google Scholar 

  • Li A, Zhu YF, Tan XM, Wang X, Wei B, Guo HZ, Zhang ZL, Chen XB, Zhao GY, Kong XY, Jia JZ, Mao L (2008a) Evolutionary and functional study of the CDPK gene family in wheat (Triticum aestivum L.). Plant Mol Biol 66:429–443

    Article  CAS  PubMed  Google Scholar 

  • Li A, Wang X, Leseberg CH, Jia J, Mao L (2008b) Biotic and abiotic stress responses through calcium-dependent protein kinase (CDPK) signaling in wheat (Triticum aestivum L.). Plant Signal Behav 3:654–656

    PubMed  Google Scholar 

  • Lu S, Hrabak E (2002) An Arabidopsis calcium-dependent protein kinase is associated with the endoplasmic reticulum. Plant Physiol 12:1008–1021

    Article  Google Scholar 

  • Ludwig A, Romeis T, Jones J (2004) CDPK-mediated signalling pathways: specificity and cross-talk. J Exp Bot 55:181–188

    Article  CAS  PubMed  Google Scholar 

  • Martín ML, Busconi L (2000) Membrane localization of a rice calcium-dependent protein kinase (CDPK) is mediated by myristoylation and palmitoylation. Plant J 24:429–435

    Article  PubMed  Google Scholar 

  • Monreal JA, López-Baena FJ, Vidal J, Echevarría C, García-Mauriño S (2010) Involvement of phospholipase D and phosphatidic acid in the light-dependent up-regulation of sorghum leaf phosphoenolpyruvate carboxylase-kinase. J Exp Bot 61:2819–2827

    Article  CAS  PubMed  Google Scholar 

  • Munnik T, Testerink C (2009) Plant phospholipid signaling: “in a nutshell”. J Lipid Res 50(Suppl):S260–S265

    Article  PubMed  Google Scholar 

  • Murashige T, Skoog F (1962) A revised medium for rapid growth and bioassays with tobacco tissue cultures. Plant Physiol 15:473–497

    Article  CAS  Google Scholar 

  • Murray MG, Thompson WF (1980) Rapid isolation of high molecular weight plant DNA. Nucleic Acids Res 8:4321–4325

    Article  CAS  PubMed  Google Scholar 

  • Raices M, Gargantini PR, Chinchilla D, Crespi M, Tellez-Inon MT, Ulloa RM (2003) Regulation of CDPK isoforms during tuber development. Plant Mol Biol 52:1011–1024

    Article  CAS  PubMed  Google Scholar 

  • Raíces M, Chico JM, Téllez-Iñón MT, Ulloa RM (2001) Molecular characterization of StCDPK1, a calcium-dependent protein kinase from Solanum tuberosum that is induced at the onset of tuber development. Plant Mol Biol 46:591–601

    Article  PubMed  Google Scholar 

  • Romeis T, Piedras P, Jones JDG (2000) Resistance gene dependent activation of a calcium-dependent protein kinase in the plant defense response. Plant Cell 12:803–815

    Article  CAS  PubMed  Google Scholar 

  • Romeis T, Ludwig AA, Martin R, Jones JD (2001) Calcium-dependent protein kinases play an essential role in a plant defence response. EMBO J 20:5556–5567

    Article  CAS  PubMed  Google Scholar 

  • Saha P, Singh M (1995) Characterization of a winged bean (Psophocarpus tetragonolobus) protein kinase with calmodulin-like domain: regulation by autophosphorylation. Biochem J 305:205–210

    CAS  PubMed  Google Scholar 

  • Schaller GE, Harmon AC, Sussman MR (1992) Characterization of a calcium- and lipid-dependent protein kinase associated with the plasma membrane of oat. Biochemistry 31:1721–1727

    Article  CAS  PubMed  Google Scholar 

  • Schindler U, Cashmore AR (1990) Photoregulated gene expression may involve ubiquitous DNA binding proteins. EMBO J 9:3415–3427

    CAS  PubMed  Google Scholar 

  • Schlessinger A, Liu J, Rost B (2007) Natively unstructured loops differ from other loops. PLoS Comput Biol 3:e140

    Article  PubMed  Google Scholar 

  • Shapiro MB, Senapathy P (1987) RNA splice junctions of different classes of eukaryotes: sequence statistics and functional implications in gene expression. Nucleic Acids Res 15:7155–7714

    Article  CAS  PubMed  Google Scholar 

  • Sutoh K, Yamauchi D (2003) Two cis-acting elements necessary and sufficient for gibberellin-upregulated proteinase expression in rice seeds. Plant J 34:635–645

    Article  CAS  PubMed  Google Scholar 

  • Szczegielniak J, Liwosz A, Jurkowski I, Loog M, Dobrowolska G, Ek P, Harmon AC, Muszyńska G (2000) Calcium-dependent protein kinase from maize seedlings activated by phospholipids. Eur J Biochem 267:3818–3827

    Article  CAS  PubMed  Google Scholar 

  • Szczegielniak J, Klimecka M, Liwosz A, Ciesielski A, Kaczanowski S, Dobrowolska G, Harmon AC, Muszyńska G (2005) A wound-responsive and phospholipid-regulated maize calcium-dependent protein kinase. Plant Physiol 139:1970–1983

    Article  CAS  PubMed  Google Scholar 

  • Ulloa RM, Raíces M, MacIntosh GC, Maldonado S, Téllez-Iñón MT (2002) Jasmonic acid affects plant morphology and calcium-dependent protein kinase expression and activity in Solanum tuberosum. Physiol Plant 115:417–427

    Article  CAS  PubMed  Google Scholar 

  • van Os H, Andrzejewski S, Bakker E (2006) Construction of a 10, 000-marker ultra-dense genetic recombination map of potato: providing a framework for accelerated gene isolation and a genome wide physical map. Genetics 173:1075–1087

    Article  PubMed  Google Scholar 

  • van Schooten B, Testerink C, Munnik T (2006) Signalling diacylglycerol pyrophosphate, a new phosphatidic acid metabolite. Biochim Biophys Acta 1761:151–159

    PubMed  Google Scholar 

  • Witte CP, Keinath N, Dubiella U, Demoulière R, Seal A, Romeis T (2010) Tobacco calcium-dependent protein kinases are differentially phosphorylated in vivo as part of a kinase cascade that regulates stress response. J Biol Chem 285:9740–9748

    Article  CAS  PubMed  Google Scholar 

Download references

Acknowledgments

We thank technical assistance of Karen McClean. We thank Dr. Sara Maldonado for helpful discussion and the technical assistance of Verónica Lainez. We thank Dr Salomé Prat Monguío (CSIC, Madrid, Spain) for the cDNA library from tuberizing stolons and Dr. Ana L. Villasuso and Dr. Estela E. Machado for providing the phospholipids. This work was supported by grants from CONICET, UBA, FONCYT-ANPCYT and the Royal Society of Edinburgh. RMU and PRG are members of CONICET. VG, CG and SB are fellows from CONICET.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Rita María Ulloa.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Giammaria, V., Grandellis, C., Bachmann, S. et al. StCDPK2 expression and activity reveal a highly responsive potato calcium-dependent protein kinase involved in light signalling. Planta 233, 593–609 (2011). https://doi.org/10.1007/s00425-010-1319-2

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00425-010-1319-2

Keywords

Navigation