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Indigoidine biosynthesis triggered by the heavy metal-responsive transcription regulator: a visual whole-cell biosensor

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Abstract

During the last few decades, whole-cell biosensors have attracted increasing attention for their enormous potential in monitoring bioavailable heavy metal contaminations in the ecosystem. Visual and measurable output signals by employing natural pigments have been demonstrated to offer another potential choice to indicate the existence of bioavailable heavy metals in recent years. The biosynthesis of the blue pigment indigoidine has been achieved in E. coli following heterologous expression of both BpsA (a single-module non-ribosomal peptide synthetase) and PcpS (a PPTase to activate apo-BpsA). Moreover, we demonstrated herein the development of the indigoidine-based whole-cell biosensors to detect bioavailable Hg(II) and Pb(II) in water samples by employing metal-responsive transcriptional regulator MerR and PbrR as the sensory elements, and the indigoidine biosynthesis gene cluster as a reporter element. The resulting indigoidine-based biosensors presented a good selectivity and high sensitivity to target metal ions. High concentration of target metal exposure could be clearly recognized by the naked eye due to the color change by the secretion of indigoidine, and quantified by measuring the absorbance of the culture supernatants at 600 nm. Dose–response relationships existed between the exposure concentrations of target heavy metals and the production of indigoidine. Although fairly good linear relationships were obtained in a relatively limited concentration range of the concentrations of heavy metal ions, these findings suggest that genetically controlled indigoidine biosynthesis triggered by the MerR family transcriptional regulator can enable a sensitive, visual, and qualitative whole-cell biosensor for bioindicating the presence of bioaccessible heavy metal in environmental water samples.

Key points

Biosynthesis pathway of indigoidine reconstructed in a high copy number plasmid in E. coli.

Visual and colorimetric detection of Hg(II) and Pb(II) by manipulation of indigoidine biosynthesis through MerR family metalloregulator.

Enhanced detection sensitivity toward Hg(II) and Pb(II) achieved using novel pigment-based whole-cell biosensors.

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All data generated or analyzed during this study are included in this published article (and its Supplementary information files).

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Funding

This work was supported by the National Natural Science Foundation of China (82073517); the Natural Science Foundation of Guangdong Province (2019A1515011989; 2021A1515012472); the Science and Technology Program of Shenzhen (JCYJ20180306170237563; JCYJ20190808175205480); Shenzhen Fund for Guangdong Provincial High-level Clinical Key Specialties (SZGSP015); and Shenzhen Key Medical Discipline Construction Fund (SZXK068).

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Contributions

C-Y. H. and N-X. Z. designed the study; Y. G., L-M. L., Y-T. C., and J. Y. performed the experiments. C-Y. H. and L. L. analyzed the experimental data; C-Y. H. and L. L. wrote and revised the manuscript. All the authors reviewed the manuscript and approved the final version.

Corresponding authors

Correspondence to Chang-ye Hui or Nai-xing Zhang.

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This article does not contain any studies with human participants or animals performed by any of the authors.

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The authors declare no competing interest.

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Hui, Cy., Guo, Y., Li, Lm. et al. Indigoidine biosynthesis triggered by the heavy metal-responsive transcription regulator: a visual whole-cell biosensor. Appl Microbiol Biotechnol 105, 6087–6102 (2021). https://doi.org/10.1007/s00253-021-11441-5

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  • DOI: https://doi.org/10.1007/s00253-021-11441-5

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