Abstract
Bioanalytical, clinical, and security applications increasingly require simple, efficient, and versatile strategies to measure an ever increasing number of analytes or events in parallel in a broad variety of detection formats as well as in conjunction with chromatographic separation techniques or flow cytometry. An attractive alternative to common optical multiplexing and encoding methods utilizing spectral multiplexing/color encoding and intensity encoding is lifetime multiplexing, which relies on the discrimination between different fluorescent reporters based on their fluorescence decay kinetics. Here, we propose a platform of surface-functionalizable polymeric nanoparticles stained with fluorophores differing in their fluorescence lifetimes as a new multiplexing and encoding approach. Proof-of-concept measurements with different sets of lifetime-encoded polystyrene nanoparticles are presented, obtained via staining of preformed particles with visible (vis)- and near-infrared (NIR)-emissive organic dyes, which display very similar absorption and emission spectra to enable excitation and detection at the same wavelengths, yet sufficiently different fluorescence decay kinetics in suspension, thereby minimizing instrumentation costs. Data analysis was performed with a linear combination approach in the lifetime domain. Our results and first cell experiments with these reporter sets underline the suitability of our multiplexing strategy for the discrimination between and the quantification of different labels. This simple and versatile concept can be extended to all types of fluorophores, thereby expanding the accessible time scale, and can be used, e.g., for the design of labels and targeted probes for fluorescence assays and molecular imaging, cellular imaging studies, and barcoding applications, also in conjunction with spectral and intensity encoding.
Similar content being viewed by others
References
Nolan JP, Mandy F (2006) Multiplexed and microparticle-based analyses: quantitative tools for the large-scale analysis of biological systems. Cytometry Part A 69A(5):318–325
Ugozzoli LA (2004) Multiplex assays with fluorescent microbead readout: a powerful tool for mutation detection. Clin Chem 50(11):1963–1965
Shepard JRE (2006) Polychromatic microarrays: simultaneous multicolor array hybridization of eight samples. Anal Chem 78(8):3589–3597
Evans M, Sewter C, Hill E (2003) An encoded particle array tool for multiplex bioassays. Assay Drug Dev Technol 1(1):199–207
De Rosa SC, Brenchley JM, Roederer M (2003) Beyond six colors: a new era in flow cytometry. Nat Med 9(1):112–117
Lieberwirth U, Arden-Jacob J, Drexhage KH, Herten DP, Muller R, Neumann M, Schulz A, Siebert S, Sagner G, Klingel S, Sauer M, Wolfrum J (1998) Multiplex dye DNA sequencing in capillary gel electrophoresis by diode laser-based time-resolved fluorescence detection. Anal Chem 70(22):4771–4779
Grabolle M, Kapusta P, Nann T, Shu X, Ziegler J, Resch-Genger U (2009) Fluorescence lifetime multiplexing with nanocrystals and organic labels. Anal Chem 81(18):7807–7813
Song EQ, Hu J, Wen CY, Tian ZQ, Yu X, Zhang ZL, Shi YB, Pang DW (2011) Fluorescent-magnetic-biotargeting multifunctional nanobioprobes for detecting and isolating multiple types of tumor cells. ACS Nano 5(2):761–770
Lakowicz JR (2006) Principles of fluorescence spectroscopy. Principles of fluorescence spectroscopy, 3rd edn. Springer, New York
Resch-Genger U, Grabolle M, Cavaliere-Jaricot S, Nitschke R, Nann T (2008) Quantum dots versus organic dyes as fluorescent labels. Nat Methods 5(9):763–775
Hotzer B, Medintz IL, Hildebrandt N (2012) Fluorescence in nanobiotechnology: sophisticated fluorophores for novel applications. Small 8(15):2297–2326
Hemmila I, Laitala V (2005) Progress in lanthanides as luminescent probes. J Fluoresc 15(4):529–542
Battersby BJ, Trau M (2007) Optically encoded particles and their applications in multiplexed biomedical assays. Aust J Chem 60(5):343–353
Raymond SB, Boas DA, Bacskai BJ, Kumar ATN (2010) Lifetime-based tomographic multiplexing. J Biomed Opt 15(4):046011
Ehlert O, Thomann R, Darbandi M, Nann T (2008) A four-color colloidal multiplexing nanoparticle system. ACS Nano 2(1):120–124
Hoffmann K, Behnke T, Drescher D, Kneipp J, ReschGenger U (2011) Lifetime-based discrimination between spectrally matching vis and NIR emitting particle labels and probes. In: Proceedings of SPIE, 2011, single molecule spectroscopy and imaging IV
Hoffmann K, Behnke T, Drescher D, Kneipp J, Resch-Genger U (2013) Near-infrared-emitting nanoparticles for lifetime-based multiplexed analysis and imaging of living cells. ACS Nano 7(8):6674–6684
Behnke T, Würth C, Hoffmann K, Hubner M, Panne U, Resch-Genger U (2011) Encapsulation of hydrophobic dyes in polystyrene micro- and nanoparticles via swelling procedures. J Fluoresc 21(3):937–944
Behnke T, Würth C, Laux EM, Hoffmann K, Resch-Genger U (2012) Simple strategies towards bright polymer particles via one-step staining procedures. Dyes Pigments 94(2):247–257
Napp J, Behnke T, Fischer L, Wurth C, Wottawa M, Katschinski DM, Alves F, Resch-Genger U, Schaferling M (2011) Targeted luminescent near-infrared polymer-nanoprobes for in vivo imaging of tumor hypoxia. Anal Chem 83(23):9039–9046
Seydack M (2005) Nanoparticle labels in immunosensing using optical detection methods. Biosens Bioelectron 20(12):2454–2469
Burns A, Ow H, Wiesner U (2006) Fluorescent core-shell silica nanoparticles: towards “lab on a particle” architectures for nanobiotechnology. Chem Soc Rev 35(11):1028–1042
Yan JL, Estevez MC, Smith JE, Wang KM, He XX, Wang L, Tan WH (2007) Dye-doped nanoparticles for bioanalysis. Nano Today 2(3):44–50
Wolfbeis OS (2005) Materials for fluorescence-based optical chemical sensors. J Mater Chem 15(27–28):2657–2669
Sharma P, Brown S, Walter G, Santra S, Moudgil B (2006) Nanoparticles for bioimaging. Adv Colloid Interface Sci 123(126):471–485
Miletto I, Gilardino A, Zamburlin P, Dalmazzo S, Lovisolo D, Caputo G, Viscardi G, Martra G (2010) Highly bright and photostable cyanine dye-doped silica nanoparticles for optical imaging: photophysical characterization and cell tests. Dyes Pigments 84(1):121–127
Behnke T, Mathejczyk JE, Brehm R, Würth C, Gomes FR, Dullin C, Napp J, Alves F, Resch-Genger U (2013) Target-specific nanoparticles containing a broad band emissive NIR dye for the sensitive detection and characterization of tumor development. Biomaterials 34(1):160–170
BASF Dispersions & Pigments North America (2013) http://www.dispersions-pigments.basf.us/p02/USWeb-Internet/pigments/en_GB/content/microsites/pigmentsdispersions/products/Lumogen. Accessed 6 Jan 2014
Behnke T, Hoffmann A, Hoffmann K, Resch-Genger U (2010) DE Patent DE102008040513 Verwendung einer langwellig emittierenden Cyaninverbindung als NIR-Fluoreszenzstandard und Kit zur Kalibrierung von Photolumineszenzmesssystemen
Patsenker LD, Tatarets AL, Povrozin YA, Terpetschnig EA (2011) Long-wavelength fluorescence lifetime labels. Bioanal Rev 3:115–137
Laux EM, Behnke T, Hoffmann K, Resch-Genger U (2012) Keeping particles brilliant—simple methods for the determination of the dye content of fluorophore-loaded polymeric particles. Anal Methods 4(6):1759–1768
Resch-Genger U, Pfeifer D, Monte C, Pilz W, Hoffmann A, Spieles M, Rurack K, Hollandt J, Taubert D, Schonenberger B, Nording P (2005) Traceability in fluorometry: part II. Spectral fluorescence standards. J Fluoresc 15(3):315–336
Krämer B, Koberling F, Tannert A, Korte T, Hermann A (2005) Fluorescence lifetime imaging (FLIM) based analysis of lipid organization in hepatocytes using the MicroTime 200. PicoQuant, Berlin
PicoQuant (2008) Picoquant application note SymphoTime software; http://www.picoquant.de/technotes/appnote_spt_demo_workspace.pdf. Accessed 8 Oct 2013
Berezin MY, Akers WJ, Guo K, Fischer GM, Daltrozzo E, Zumbusch A, Achilefu S (2009) Long fluorescence lifetime molecular probes based on near infrared pyrrolopyrrole cyanine fluorophores for in vivo imaging. Biophys J 97(9):L22–L24
Nothdurft R, Sarder P, Bloch S, Culver J, Achilefu S (2012) Fluorescence lifetime imaging microscopy using near-infrared contrast agents. J Microsc 247(2):202–207
Berezin MY, Achilefu S (2010) Fluorescence lifetime measurements and biological imaging. Chem Rev 110(5):2641–2684
Abbasi AZ, Amin F, Niebling T, Friede S, Ochs M, Carregal-Romero S, Montenegro JM, Gil PR, Heimbrodt W, Parak WJ (2011) How colloidal nanoparticles could facilitate multiplexed measurements of different analytes with analyte-sensitive organic fluorophores. ACS Nano 5(1):21–25
Acknowledgments
We gratefully acknowledge the financial support from the Federal Ministry of Economics and Technology (BMWI-22/06 and BMWI-13/09). We would like to thank D. Drescher and J. Kneipp (BAM 1.0) for designing and performing the cell culture experiments. We also express our gratitude to Picoquant GmbH for support with the FLIM setup.
Author information
Authors and Affiliations
Corresponding author
Additional information
Published in the topical collection Multiplex Platforms in Diagnostics and Bioanalytics with guest editors Günter Peine and Günther Proll.
Rights and permissions
About this article
Cite this article
Hoffmann, K., Behnke, T., Grabolle, M. et al. Nanoparticle-encapsulated vis- and NIR-emissive fluorophores with different fluorescence decay kinetics for lifetime multiplexing. Anal Bioanal Chem 406, 3315–3322 (2014). https://doi.org/10.1007/s00216-013-7597-3
Received:
Revised:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s00216-013-7597-3