Skip to main content
Log in

Generation and characterization of low phytic acid germplasm in rice (Oryza sativa L.)

  • Original Paper
  • Published:
Theoretical and Applied Genetics Aims and scope Submit manuscript

Abstract

Phytic acid (PA, myo-inositol 1,2,3,4,5,6-hexakisphosphate), or its salt form, phytate, is commonly regarded as the major anti-nutritional component in cereal and legume grains. Breeding of low phytic acid (lpa) crops has recently been considered as a potential way to increase nutritional quality of crop products. In this study, eight independent lpa rice mutant lines from both indica and japonica subspecies were developed through physical and chemical mutagenesis. Among them, five are non-lethal while the other three are homozygous lethal. None of the lethal lines could produce homozygous lpa plants through seed germination and growth under field conditions, but two of them could be rescued through in vitro culture of mature embryos. The non-lethal lpa mutants had lower PA content ranging from 34 to 64% that of their corresponding parent and four of them had an unchanged total P level. All the lpa mutations were inherited in a single recessive gene model and at least four lpa mutations were identified mutually non-allelic, while the other two remain to be verified. One mutation was mapped on chromosome 2 between microsatellite locus RM3542 and RM482, falling in the same region as the previously mapped lpa1-1 locus did; another lpa mutation was mapped on chromosome 3, tightly linked to RM3199 with a genetic distance of 1.198 cM. The latter mutation was very likely to have happened to the LOC_Os03g52760, a homolog of the maize myo-inositol kinase (EC 2.7.1.64) gene. The present work greatly expands the number of loci that could influence the biosynthesis of PA in rice, making rice an excellent model system for research in this area.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3

Similar content being viewed by others

References

  • Adams C, Raboy V, Krebs N, Westcott J, Lei S, Hambidge M (2001) The effect of low-phytic acid corn mutants on Zn absorption. FASEB J 73:80–85

    Google Scholar 

  • Andaya CB, Tai TH (2005) Fine mapping of the rice low phytic acid (lpa1) locus. Theor Appl Genet 111:489–495

    Article  PubMed  CAS  Google Scholar 

  • Bregitzer P, Raboy V (2006) Effects of four independent low-phytate mutations on barley agronomic performance. Crop Sci 46:1318–1322

    Article  Google Scholar 

  • Chen PS, Toribara TY, Warner H (1956) Microdetermination of phosphorous. Anal Chem 28:1756–1758

    Article  CAS  Google Scholar 

  • Dorsch JA, Cook A, Young KA, Anderson JM, Bauman AT, Volkmann CJ, Murthy PPN, Raboy V (2003) Seed phosphorus and inositol phosphate phenotype of barley low phytic acid genotypes. Phytochem 62:691–706

    Article  CAS  Google Scholar 

  • Douglas MW, Peter CM, Boling SD, Parsons CM, Baker DH (2000) Nutritional evaluation of low phytate and high protein corns. Poult Sci 79:1586–1591

    PubMed  CAS  Google Scholar 

  • Guttieri M, Bowen D, Dorsch JA, Raboy V, Souza E (2004) Identification and characterization of a low phytic acid wheat. Crop Sci 44:418–424

    Article  CAS  Google Scholar 

  • van Harten AM (1998) Mutation breeding—theory and practical application. Cambridge University Press, Cambridge

    Google Scholar 

  • Larson SR, Young KA, Cook A, Blake TK, Raboy V (1998) Linkage mapping of two mutations that reduce phytic acid content of barley grain. Theor Appl Genet 97:141–146

    Article  CAS  Google Scholar 

  • Larson SR, Rutger JN, Young KA, Raboy V (2000) Isolation and genetic mapping of a non-lethal rice (Oryza sativa L.) low phytic acid 1 mutation. Crop Sci 40:1397–1405

    Article  CAS  Google Scholar 

  • Li YC, Ledoux DR, Veum TL, Raboy V, Ertl DS (2000) Effects of low phytic acid corn on phosphorus utilization, performance, and bone mineralization in broiler chicks. Poult Sci 79:1444–1450

    PubMed  CAS  Google Scholar 

  • Liu RH, Meng JL (2003) Mapdraw: a Microsoft Excel macro for drawing genetic linkage maps based on given genetic linkage data. Hereditas (Beijing) 25:317–321

    Google Scholar 

  • Lolle SJ, Victor JL, Young JM, Pruitt RE (2005) Genome-wide non-mendelian inheritance of extra-genomic information in Arabidopsis. Nature 434: 505–509

    Article  PubMed  CAS  Google Scholar 

  • Lott JNA, Ockenden I, Raboy V, Batten GD (2000) Phytic acid and phosphorus in crops seeds and fruits: a global estimate. Seed Sci Res 10:11–33

    CAS  Google Scholar 

  • Loza PL, Stanton TL, Engle TE, Schutz D, Rhoads AR (2002) Effects of feeding low phytate corn varieties on growth performance, feed efficiency, serum phosphorus level, Longissimus Dorsi fatty acid composition and carcass characteristics of finishing beef cattle. J Anim Sci 80:1999–2005

    Google Scholar 

  • Lu YJ, Zheng KL (1992) A simple method for isolation of rice DNA. Chin J Rice Sci 6:47–48

    Google Scholar 

  • Meis SJ, Fehr WR, Schnebly SR (2003) Seed source effect on field emergence of soybean lines with reduced phytate and raffinose saccharides. Crop Sci 43:1336–1339

    Article  Google Scholar 

  • Mendoza C, Viteri FE, Lonnerdal B, Young KA, Raboy V, Brown KH (1998) Effect of genetically modified, low-phytic acid maize on absorption of iron from tortillas. Am J Clin Nutr 68:1123–1128

    PubMed  CAS  Google Scholar 

  • Mendoza C, Viteri FE, Lonnerdal B, Raboy V, Young KA, Brown KH (2001) Absorption of iron from unmodified maize and genetically altered, low-phytate maize fortified with ferrous sulfate or sodium iron EDTA. Am J Clin Nutr 73:80–85

    PubMed  CAS  Google Scholar 

  • Murashige T, Skoog F (1962) A revised medium for rapid growth and bioassays with tobacco tissue culture. Physiol Plant 15:473–497

    Article  CAS  Google Scholar 

  • van Oijen JW, Voorrips RE (2001). JoinMapR Version 3.0 software for the calculation of genetic linkage map. Plant Res Int, Wageningen

  • Oltmans SE, Fehr WR, Welke GA, Raboy V, Peterson KL (2005) Agronomic and seed traits of soybean lines with low-phytate phosphorus. Crop Sci 45:593–598

    Article  CAS  Google Scholar 

  • Panaud O, Chen X, McCouch SR (1996) Development of microsatellite markers and characterization of simple sequence length polymorphism (SSLP) in rice (Oryza sativa L.). Mol Gen Genet 252:597–607

    PubMed  CAS  Google Scholar 

  • Philliphy BQ, Bland JM, Evens TJ (2003) Ion chromatography of phytate in roots and tubers. J Agric Food Chem 51:350–353

    Article  CAS  Google Scholar 

  • Pilu R, Panzeri D, Gavazzi G, Rasmussen SK, Consonni G, Nielsen E (2003) Phenotypic, genetic and molecular characterization of a maize low phytic acid mutant (lpa 241). Theor Appl Genet 107:980–987

    Article  PubMed  CAS  Google Scholar 

  • Pilu R, Landoni M, Cassani E, Doria E, Nielsen E (2005) The maize lpa241 mutation causes a remarkable variability of expression and some pleiotropic effects. Crop Sci 45:2096–2105

    Article  CAS  Google Scholar 

  • Raboy V (1997) Accumulation and storage of phosphate and minerals. In: Larkins BA, Vasil IK (eds) Cellular and molecular biology of plant seed development. Kluwer, Dordrecht, pp 441–477

    Google Scholar 

  • Raboy V (2001) Seeds for a better future: ‘low phytate’ grains help to overcome malnutrition and reduce pollution. Trends Plant Sci 6:458–462

    Article  PubMed  CAS  Google Scholar 

  • Raboy V, Dickison DB, Below FE (1984) Variation in seed total phosphorous, phytic acid, zinc, calcium, magnesium, and protein among lines of Glycine max and G. soja. Crop Sci 24:431–434

    Article  CAS  Google Scholar 

  • Raboy V, Gerbasi PF, Young KA, Stoneberg SD, Pickett SG, Bauman AT, Murthy PPN, Sheridan WF, Ertl DS (2000) Origin and seed phenotype of maize low phytic acid 1–1 and low phytic acid 2–1. Plant Physiol 124:355–368

    Article  PubMed  CAS  Google Scholar 

  • Rasmussen SK, Hatzak F (1998) Identification of two low-phytate barley (Hordeum vulgare L.) grain mutants by TLC and genetic analysis. Hereditas 129:107–112

    Article  CAS  Google Scholar 

  • Rassoulzadegan M, Grandjean V, Gounon P, Vicent S, Gillot I, Cuzin F (2006) RNA-mediated non-mendelian inheritance of an epigenetic change in the mouse. Nature 441: 469–474

    Article  PubMed  CAS  Google Scholar 

  • Rutger JN, Raboy V, Moldenhauer KAK, Bryant RJ, Lee FN, Gibbons JW (2004) Registration of KBNT lpa1–1 low phytic acid germplasm of rice. Crop Sci 44:363

    Article  Google Scholar 

  • Shen SQ, Wu DX, Xia YW, Shu QY (2003) Obtaining pure insect resistant Bt lines through anther culture in rice. J Agric Biotechnol 11:561–565

    Google Scholar 

  • Shi JR, Wang HY, Wu YS, Hazebroek J, Meeley RB, Ertl DS (2003) The maize low-phytic acid mutant lpa2 is caused by mutation in an inositol phosphate kinase gene. Plant Physiol 131:507–515

    Article  PubMed  CAS  Google Scholar 

  • Shi JR, Wang HY, Hazebroek J, Ertl DS, Harp T (2005) The maize low-phytic acid 3 encodes a myo-inositol kinase that plays a role in phytic acid biosynthesis in developing seeds. Plant J 42:408–419

    Article  CAS  Google Scholar 

  • Shi JR, Ertl DS, Wang HY, Li BL, Faller M, Schellin K (2006) Maize multidrug resistance-associated protein polynucleotides and methods of use. US Patent Application 20060143728

  • Shukla S, Vantoai TT, Pratt RC (2004) Expression and nucleotide sequence of an INS(3)P1 synthase gene associated with low-phytate kernels in maize (Zea mays L.). J Agric Food Chem 52:465–4570

    Google Scholar 

  • Spencer JD, Allee GL, Sauber TE (2000a) Phosphorus bioavailability and digestibility of normal and genetically modified low-phytate corn for pigs. J Anim Sci 78:675–681

    CAS  Google Scholar 

  • Spencer JD, Allee GL, Sauber TE (2000b) Growing-finishing performance and carcass characteristics of pigs fed normal and genetically modified low-phytate corn. J Anim Sci 78:1529–1536

    CAS  Google Scholar 

  • Stevenson-Paulik J, Bastidas RJ, Chiou AT, Frye RA, York JD (2005) Generation of phytate-free seeds in Arabidopsis through disruption of inositol polyphosphate kinases. PNAS USA 102:12612–12617

    Article  PubMed  CAS  Google Scholar 

  • Temnykh S, Park WD, Ayers N, Cartinhour S, Hauck N, Lipovich L, Cho YG, Shii T, McCouch SR (2000) Mapping and genome organization of microsatellite sequences in rice (Oryza sativa L.). Theor Appl Genet 100:697–712

    Article  CAS  Google Scholar 

  • Temnykh S, DeClerck G, Lukasshova A, Lipovich L, Cartinhour S, McCouch SR (2001) Computational and experimental analysis of microsatellites in rice (Oryza sativa L.): frequency, length variation, transposon associations, and genetic marker potential. Genome Res 11:1441–1452

    Article  PubMed  CAS  Google Scholar 

  • Veum TL, Ledoux DR, Raboy V, Ertl DS (2001) Low-phytic acid corn improves nutrient utilization of growing pigs. J Anim Sci 79:2873–2880

    PubMed  CAS  Google Scholar 

  • Walker DR, Scaboo AM, Pantalone VR, Wilcox JR, Boerma HR (2006) Genetic mapping of loci associated with seed phytic acid content in CX1834-1-2 soybean. Crop Sci 46:390–397

    Article  CAS  Google Scholar 

  • Wilcox JR, Premachandra GS, Young KA, Raboy V (2000) Isolation of high inorganic P, low-phytate soybean mutants. Crop Sci 40:1601–1605

    Article  Google Scholar 

  • Xia HJ, Yang G (2005) Inositol 1,4,5-trisphosphate 3 kinases: functions and regulation. Cell Res 15:83–91

    Article  PubMed  CAS  Google Scholar 

  • Yan F, Kersey JH, Fritts CA, Waldroup PW, Stilborn HL, Crum RC, Rice DW, Raboy V (2000) Evaluation of normal yellow dent corn and high available phosphorus corn in combination with reduced dietary phosphorus and phytase supplementation for broilers grown to market weights in litter pens. Poult Sci 79:1282–1289

    PubMed  CAS  Google Scholar 

  • Yan F, Fritts CA, Waldroup PW, Stilborn HL, Rice D, Crum RC Jr, Raboy V (2003) Comparison of normal and high available phosphorus corn with and without phytase supplementation in diets for male large white turkeys grown to market weights. Int J Poult Sci 2:83–90

    Article  Google Scholar 

Download references

Acknowledgments

The authors are grateful to Prof. Cui HR for his advice on molecular mapping and to Dr. Zhu Y and Dr Zhang JJ of Zhejiang University for assistance in PA–P determination using HPIC. We are grateful to Profs. Gao MW and Altosaar I for their critical reading of and constructive suggestions to this paper. This work was mainly supported by the Sixth EU Framework Programme (NOFORISK, FP6-506387), with supplementary funding from China Natural Science Foundation (30571131) and Zhejiang Provincial Department of Science and Technology (2005C32004). This project is also a part of the IAEA regional technical cooperation project (RAS07014).

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Qing-Yao Shu.

Additional information

Communicated by T. Sasaki.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Liu, QL., Xu, XH., Ren, XL. et al. Generation and characterization of low phytic acid germplasm in rice (Oryza sativa L.). Theor Appl Genet 114, 803–814 (2007). https://doi.org/10.1007/s00122-006-0478-9

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00122-006-0478-9

Keywords

Navigation