Skip to main content
Log in

Restriction mapping of DNA of temperate Rhizobium meliloti phage 16-3: Comparison of genetic and physical maps indicates a long, genetically silent chromosomal arm

  • Published:
Molecular and General Genetics MGG Aims and scope Submit manuscript

Summary

The complete restriction map of DNA (61.57 Kb) of temperate Rhizobium meliloti phage 16-3 has been constructed for enzymes BglII, HindIII, HpaI, KpnI, and a partial map for EcoRI. The strategy employed for mapping included the analysis of double, triple, and partial digests; comparison of wild type and deletion mutants; and detailed analysis of subfragments, exploiting the presence of cohesive ends of the phage. Comparison of the genetic and physical maps indicates that one arm of the chromosome is genetically silent and/or contains nonessential genes.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Allet, B., Jeppesen, P.G.N., Katagiri, K.J., Delius, H.: Mapping the DNA fragments produced by cleavage of lambda DNA with endonuclease RI. Nature (Lond.) 241, 120–123 (1973)

    Google Scholar 

  • Botchan, P.: An electron microscopic comparison of transcription on linear and superhelical DNA. J. Mol. Biol. 105, 161–176 (1976)

    Google Scholar 

  • Boyer, H.W.: DNA restriction and modification mechanisms in bacteria. Ann. Rev. Microbiol. 25, 153–176 (1971)

    Google Scholar 

  • Daniels, D.L., de Wet, J.R., Blattner, F.R.: A genetic and physical map of bacteriophage λ DNA. (in press) (1979)

  • Davidson, N., Szybalsky, N.W.: Physical and chemical characteristics of Lambda DNA. In: The bacteriophage Lambda, A.D. Hershey (ed.) p. 74, Fig. 8. Cold Spring Harbor: Cold Spring Harbor Laboratory 1971

    Google Scholar 

  • Dudás, B., Dallmann, G., Deák, F., Orosz, L.: Genetic fine structure and funtions in the left terminal region of the chromosome of Rhizobium temperate phage 16-3. XIV. International Congress of Genetics. Contributed paper sessions, Abstracts, Part I, 8. (1978)

  • Haas, D., Holloway, B.W.: R factor variants with enhanced sex factor activity in Pseudomonas aeruginosa. Molec. Gen. Genet. 144, 243–251 (1976)

    Google Scholar 

  • Helling, R.B., Goodman, H.M. and Boyer, H.W.: Analysis of endonuclease R. EcoRI fragments of DNA from lambdoid bacteriophages and other viruses by agarose-gel electrophoresis. J. Virol. 14, 1235–1244 (1974)

    Google Scholar 

  • Humpries, P., Gordon, R.L., McColonel, D.J. and Conolly, P.: Endonuclease R. Hind fragments of T7 DNA. Virology 58, 25–31 (1974)

    Google Scholar 

  • Kamp, D., Kahmann, R., Zipser, D., Roberts, R.J.: Mapping of restriction sites in the attachment site region of bacteriophage lambda. Molec. Gen. Genet. 154, 231–248 (1977)

    Google Scholar 

  • Kiss, Gy., Dobó, K., Breznovits, Á., Orosz, L., Dusha, I., Kondorosi, Á.: Isolation and characterization of an R-prime factor in Rhizobium meliloti. J. Bacteriol. (submitted for publication) (1979)

  • Kondorosi, Á., Orosz, L., Sváb, Z., Sik, T.: Genetic studies on Rhizobiophage 16-3. II. Helper-induced transfection. Molec. Gen. Genet. 132, 153–163 (1974)

    Google Scholar 

  • Lindahl, L., Yamamoto, M., Nomura, M.: Mapping of a cluster of genes for components of the transcriptional and translational machineries of Escherichia coli. J. Mol. Biol. 109, 23–47 (1977)

    Google Scholar 

  • Murray, K., Murray, N.E.: Phage lambda receptor chromosomes for DNA fragments made with restriction endonuclease III of Haemophilus influenzae and restriction endonuclease I of Escherichia coli. J. Mol. Biol. 98, 551–564 (1975)

    Google Scholar 

  • Nosikov, V.V., Braga, E.A., Sain, B.: Physical mapping of bacteriophage lambda DNA with restriction endonuclease HpaI. Gene 4, 69–84 (1978)

    Google Scholar 

  • Orosz, L.: Genetic mapping of regulator gene of phage 16-3 of Rhizobiummeliloti. Bacterial Plasmids and Antibiotic Resistance, International Symposium, Smolenice 1971 (V. Kremery, L. Rosival, T. Watanabe, eds.) Springer-Verlag, Berlin, Heidelberg, New York: 355–358

    Google Scholar 

  • Orosz, L., Ascher, Z.: Deletion and the three point map of gene C of Rhizobiophage 16-3. Acta Microbiol. Acad. Sci. Hung. 24, 89 (1977)

    Google Scholar 

  • Orosz, L., Rostás, K.: An additive fine map without high negative interference and an explanation in the C cistron of Rhizobium phage 16-3. XIV. International Congress of Genetics. Contributed paper sessions, Abstracts Part I, 235 (1978)

  • Orosz, L., Sik, T.: Genetic mapping of Rhizobiophage 16-3. Acta Microbiol. Acad. Sci. Hung. 17, 185–194 (1970)

    Google Scholar 

  • Orosz, L., Rostás, K., Hotchkiss, R.D.: A comparison of two point, three point and deletion mapping in the C cistron of Rhizobium phage 16-3, and an explanation of the recombination pattern. Genetics (in press) (1979)

  • Orosz, L., Sváb, Z., Kondorosi, A., Sik, T.: Genetic studies on Rhizobiophage 16-3. I. Genes and functions on the choromosome. Molec. Gen. Genet. 125, 341–350 (1973)

    Google Scholar 

  • Ördögh, F., Szende, K.: Temperate bacteriophages isolated from Rhizobium meliloti. Acta Microbiol. Acad. Sci. Hung. 7, 65–71 (1961)

    Google Scholar 

  • Pirotta, V.: Two restriction endonucleases from Bacillus globigii. Nucl. Ac. Res. 3, 1747–1460 (1976)

    Google Scholar 

  • Roberts, R.J.: Restriction endonucleases. CRC Crit. Rev. Biochem. 4, 123–164 (1976)

    Google Scholar 

  • Roberts, R.J.: Restriction and modification enzymes and their recognition sequences. Gene 4, 183–193 (1978)

    Google Scholar 

  • Rostás, K., Orosz, L.: Two point corsses with internal recombination control to detect marker effect in gene C of Rhizobiophage 16-3. Acta Microbiol. Acad. Sci. Hung 24, 89 (1977)

    Google Scholar 

  • Sik, T., Orosz, L.: Chemistry and genetics of Rhizobium meliloti phage 16-3. Plant and Soil, Special Volume, 57–62 (1971)

  • Sugden, B., Detroy, B., Roberts, R.J., Sambrook, J.: Agarose slab gel electrophoresis equipment. Anal. Biochem. 68, 36–46 (1975)

    Google Scholar 

  • Sváb, Z., Kondorosi, Á., Orosz, L.: Specialized Transduction of a cystein marker by Rhizobium meliloti phage 16-3. J. Gen. Microbiol. 106, 321–327 (1978)

    Google Scholar 

  • Szende, K.: Genom structures in a lysogenic Rhizobium meliloti system. Plant and Soil. Special Volume, 81–84 (1971)

  • Thomas, M., Davis, R.W.: Studies on the cleavage of bacteriophage lambda DNA with EcoRI restriction endonuclease. J. Mol. Biol. 91, 315–328 (1975)

    Google Scholar 

  • Yamatomo, K.R., Alberts, B.M., Benzinger, R., Lawhorne, L., Treiber, G.: Rapid bacteriophage sedimentation in the presence of polyethylene glycol and its application to large-scale virus purification. Virology 40, 734–744 (1970)

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Additional information

Communicated by W. Arber

Rights and permissions

Reprints and permissions

About this article

Cite this article

Dallmann, G., Orosz, L. & Sain, B. Restriction mapping of DNA of temperate Rhizobium meliloti phage 16-3: Comparison of genetic and physical maps indicates a long, genetically silent chromosomal arm. Molec. gen. Genet. 176, 439–448 (1979). https://doi.org/10.1007/BF00333109

Download citation

  • Received:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00333109

Keywords

Navigation