Skip to main content
Log in

Acridine-orange differential fluorescence of fast- and slow-reassociating chromosomal DNA after in situ DNA denaturation and reassociation

  • Published:
Chromosoma Aims and scope Submit manuscript

Abstract

A cytological technique based on heat denaturation of in situ chromosomal DNA followed by differential reassociation and staining with acridine orange was developed. Mouse nuclei and chromosomes in fixed cytological preparations show a red-orange fluorescence after thermal DNA denaturation (2–4 minutes at 100° C), and fluoresce green if denaturation is followed by a total DNA reassociation (two minutes or more at 65–66°C). — A reassociation time between a few and 60–90 seconds demonstrates the centromeric heterochromatin of chromosomes (which sometimes aggregate in the form of clusters) and the interphase chromocenters in green, the chromosomal arms fluorescing red-orange. Under the same conditions, the Y chromosome presents a pale green or yellow-green fluorescence along its chromatids, but its centromeric region fluoresces weakly. — The interpretation is suggested that the fast-reassociating chromosomal DNA (as detected by AO in centromeric heterochromatin and interphase chromocenters), represents repetitive DNA.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Arrighi, F. E., Bergendahl, J., Mandel, M.: Isolation and characterization of DNA from fixed cells and tissues. Exp. Cell Res. 50, 47–53 (1968).

    Google Scholar 

  • Arrighi, F. E., Hsu, T. C.: Localization of heterochromatin in human chromosomes. Cytogenetics 10, 81–86 (1971).

    Google Scholar 

  • Arrighi, F. E., Hsu, T. C., Saunders, P., Saunders, G. F.: Localization of repetitive DNA in chromosomes of Microtus agrestis by means of in situ hybridization. Chromosoma (Berl.) 32, 224–236 (1970).

    Google Scholar 

  • Bennett, D.: Non-random association of chromosomes during mitotic metaphase in tissue cells of the mouse. Cytologia (Tokyo) 31, 411–415 (1966).

    Google Scholar 

  • Botchan, M., Kram, R., Schmid, C. W., Hearst, J. E.: Isolation and chromosomal localization of highly repeated DNA sequences in Drosophila melanogaster. Proc. nat. Acad. Sci. (Wash.) 68, 1125–1129 (1971).

    Google Scholar 

  • Britten, R. J., Kohne, D. E.: Repeated sequences in DNA. Science 161, 529–540 (1968).

    Google Scholar 

  • Britten, R. J., Kohne, D. E.: Repetition of nucleotide sequences in chromosomal DNA. Handbook of molecular cytology (A. Lima-de-Faria, ed.), p. 21–36. Amsterdam-London: North-Holland Publ. Co. 1969a.

    Google Scholar 

  • Britten, R. J., Kohne, D. E.: Implications of repeated nucleotide sequences. Handhook of molecular cytology (A. Lima-de-Faria, ed.), p. 37–51. Amsterdam-London: North-Holland Publ. Co. 1969b.

    Google Scholar 

  • Brown, S. W.: Heterochromatin. Science 151, 417–425 (1966).

    Google Scholar 

  • Caspersson, T., Lomakka, G., Zech, L.: The 24 fluorescence patterns of the human metaphase chromosomes. Distinguishing characters and variability. Hereditas (Lund) 67, 89–102 (1971).

    Google Scholar 

  • Dick, C., Johns, E. W.: The effect of two acetic acid containing fixatives on the histone content of calf thymus deoxyribonucleoprotein and calf thymus tissue. Exp. Cell Res. 51, 626–632 (1968).

    Google Scholar 

  • Drets, M. E., Shaw, M. W.: Specific banding patterns of human chromosomes. Proc. nat. Acad. Sci. (Wash.) 68, 2073–2077 (1971).

    Google Scholar 

  • Gagné, R., Tanguay, R., Laberge, C.: Differential staining patterns of heterochromatin in man. Nature (Lond.) New Biol. 232, 29–30 (1971).

    Google Scholar 

  • Gall, J. G., Pardue, M. L.: Formation and detection of RNA-DNA hybrid molecules in cytological preparations. Proc. nat. Acad. Sci. (Wash.) 63, 378–383 (1969).

    Google Scholar 

  • Griffen, A. B.: Mammalian pachytene chromosome mapping and somatic chromosome identification. J. cell. comp. Physiol. 56, Suppl. 1, 113–121 (1960).

    Google Scholar 

  • Hennig, W., Hennig, I., Stein, M.: Repeated sequences in the DNA of Drosophila and their localization in giant chromosomes. Chromosoma (Berl.) 32, 31–63 (1970).

    Google Scholar 

  • Hennig, W., Walker, P. M. B.: Variations in the DNA from two rodent families (Cricetidae and Muridae). Nature (Lond.) 225, 915–919 (1970).

    Google Scholar 

  • John, B., Lewis, K. R.: The chromosome cycle. Protoplasmatologia VI/B. Wien-New York: Springer 1969.

    Google Scholar 

  • Jones, K. W.: Chromosomal and nuclear location of mouse satellite DNA in individual cells. Nature (Lond.) 225, 912–915 (1970).

    Google Scholar 

  • Jones, K. W., Corneo, G.: Location of satellite and homogeneous DNA sequences on human chromosomes. Nature (Lond.) New Biol. 233, 268–271 (1971).

    Google Scholar 

  • Jones, K. W., Robertson, P. W.: Localisation of reiterated nucleotide sequences in Drosophila and mouse by in situ hybridisation of complementary RNA. Chromosoma (Berl.) 31, 331–345 (1970).

    Google Scholar 

  • Kasten, F. H.: Cytochemical studies with acridine orange and the influence of dye contaminants in the staining of nucleic acids. Int. Rev. Cytol. 21, 141–202 (1967).

    Google Scholar 

  • Kofman-Alfaro, S., Chandley, A. C.: Meiosis in the male mouse. An autoradio graphic investigation. Chromosoma (Berl.) 31, 404–420 (1970).

    Google Scholar 

  • Lee, J. C., Yunis, J. J.: Constitutive heterochromatin during early embryogenesis of Microtus agrestis. Exp. Cell Res. 59, 339–341 (1970).

    Google Scholar 

  • Marmur, J., Rownd, R., Schildkraut, C. L.: Denaturation and renaturation of deoxyribonucleic acid. Progress in nucleic acid research, vol. 1 (J. N. Davidson and W. E. Cohn, eds.), p. 231–300. New York-London: Academic Press 1963.

    Google Scholar 

  • Miller, O. J., Miller, D. A., Kouri, R. E., Allderdice, P. W., Dev, V. G., Grewal, M. S., Hutton, J. J.: Identification of the mouse karyotype by quinacrine fluorescence, and tentative assignment of seven linkage groups. Proc. nat. Acad. Sci. (Wash.) 68, 1530–1533 (1971).

    Google Scholar 

  • Nash, D., Plaut, W.: On the denaturation of chromosomal DNA in situ. Proc. nat. Acad. Sci. (Wash.) 51, 731–735 (1964).

    Google Scholar 

  • Ohno, S., Christian, L. C., Stenius, C.: Significance in mammalian oögenesis of the non-homologous association of bivalents. Exp. Cell Res. 32, 590–592 (1963).

    Google Scholar 

  • Ohno, S., Kaplan, W. D., Kinosita, R.: Heterochromatic regions and nucleolus organizers in chromosomes of the mouse Mus musculus. Exp. Cell Res. 13, 358–364 (1957).

    Google Scholar 

  • Pardue, M. L., Gall, J. G.: Chromosomal localization of mouse satellite DNA. Science 168, 1356–1358 (1970).

    Google Scholar 

  • Patil, S. R., Merrick, S., Lubs, H. A.: Identification of each human chromosome with a modified Giemsa stain. Science 173, 821–822 (1971).

    Google Scholar 

  • Rae, P. M. M.: Chromosomal distribution of rapidly reannealing DNA in Drosophila melanogaster. Proc. nat. Acad. Sci. (Wash.) 67, 1018–1025 (1970).

    Google Scholar 

  • Rigler, R.: Microfluorometric characterization of intracellular nucleic acids and nucleoproteins by acridine orange. Acta physiol. scand. 67, Suppl. 267, 1–122 (1966).

    Google Scholar 

  • Rigler, R.: Acridine orange in nucleic acid analysis. Ann. N.Y. Acad. Sci. 157, 211–224 (1969).

    Google Scholar 

  • Rigler, R., Killander, D., Bolund, L., Ringertz, N. R.: Cytochemical characterization of deoxyribonucleoprotein in individual cell nuclei. Exp. Cell Res. 55, 215–224 (1969).

    Google Scholar 

  • Ringertz, N. R., Gledhill, B. L., Darzynkiewicz, Z.: Changes in deoxyribonucleoprotein during spermiogenesis in the bull. Sensitivity of DNA to heat denaturation. Exp. Cell Res. 62, 204–218 (1970).

    Google Scholar 

  • Rowley, J. D., Bodmer, W. F.: Relationship of centromeric heterochromatin to fluorescent banding patterns of metaphase chromosomes in the mouse. Nature (Lond.) 231, 503–506 (1971).

    Google Scholar 

  • Sakoda, M., Hiromi, K., Akasaka, K.: Kinetic studies of interaction between acridine orange and DNA. Biopolymers 10, 1003–1012 (1971).

    Google Scholar 

  • Schildkraut, C. L., Maio, J. J.: Studies on the intranuclear distribution and properties of mouse satellite DNA. Biochim. biophys. Acta (Amst.) 161, 76–93 (1968).

    Google Scholar 

  • Schümmelfeder, N.: Histochemical significance of the polychromatic fluorescenc induced in tissues stained with acridine-orange. J. Histochem. Cytochem. 6, 392–393 (1958).

    Google Scholar 

  • Solari, A. J.: The behaviour of chromosomal axes in Searle's-autosome translocation. Chromosoma (Berl.) 34, 99–112 (1971).

    Google Scholar 

  • Southern, E. M.: Base sequence and evolution of guinea-pig α-satellite DNA. Nature (Lond.) 227, 794–798 (1970).

    Google Scholar 

  • Stockert, J. C.: Método citogenético por suspensión celular aplicado al testículo de ratón BALB. Ciencia (Méx.) 25, 223–224 (1967).

    Google Scholar 

  • Stockert, J. C., Lisanti, J. A.: Differential fluorescence in metaphase chromosomes stained with acridine orange. Stain Technol. (in press) (1972).

  • Sumner, A. T., Evans, H. J., Buckland, R. A.: New technique for distinguishing between human chromosomes. Nature (Lond.) New Biol. 232, 31–32 (1971).

    Google Scholar 

  • Walker, P. M. B., Flamm, W. G., Mclaren, A.: Highly repetitive DNA in rodents. Handbook of molecular cytology (A. Lima-de-Faria, ed.), p. 52–56. Amsterdam-London: North-Holland Publ. Co. 1969.

    Google Scholar 

  • Westergaard, M., Wettstein, D. von: The nucleolar cycle in an Ascomycete. C. R. Lab. Carlsberg 37, 195–237 (1970).

    Google Scholar 

  • Yasmineh, W. G., Yunis, J. J.: Localization of mouse satellite DNA in constitutive heterochromatin. Exp. Cell Res. 59, 69–75 (1970).

    Google Scholar 

  • Yunis, J. J., Roldan, L., Yasmineh, W. G., Lee, J. C.: Staining of satellite DNA in metaphase chromosomes. Nature (Lond.) 231, 532–533 (1971).

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Stockert, J.C., Lisanti, J.A. Acridine-orange differential fluorescence of fast- and slow-reassociating chromosomal DNA after in situ DNA denaturation and reassociation. Chromosoma 37, 117–130 (1972). https://doi.org/10.1007/BF00284934

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00284934

Keywords

Navigation