Skip to main content
Log in

Characterization and sequencing of cDNA clone encoding the phloem protein PP2 of Cucurbita pepo

  • Research Articles
  • Published:
Plant Molecular Biology Aims and scope Submit manuscript

Abstract

Direct N-terminal amino acid sequencing of the phloem protein 2 (PP2) from 3-month old Cucurbita pepo L. (pumpkin), purified by SDS-PAGE and blotted onto PVDF membrane, showed that the protein had a blocked N-terminus. However, after in situ cleavage of the polypeptide in a gel slice by cyanogen bromide, 75 residues of sequence on two cyanogen bromide fragments were determined. An oligonucle-otide probe based on this amino acid sequence was used to screen a cDNA library, constructed from mRNA of 3–5-day old seedling hypocotyls, in λZAP II. A cDNA clone (p11A) predicted an amino acid sequence of 218 residues, in full agreement with the sequences determined for two CNBr fragments of PP2, and suggests that the N-terminus of the protein is a blocked methionine residue which is cleaved off by CNBr. Two additional cDNA clones were sequenced but no heterogeneity in the PP2 sequence was found. The deduced amino acid sequence of C. pepo differs in nine residues from the recently published sequence of Cucurbita maxima (Bostwick et al., Plant Cell 4 (1992) 1539–1548). Southern blot showed that PP2 is encoded by a gene family with a relatively large number of members (estimated as 7–15 per haploid genome).

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. Allen AK: A lectin from the exudate of the fruit of the vegetable marrow (Cucurbita pepo) that has specificity for β-1,4-linked N-acetylglucosamine oligosaccharides. Biochem J 183: 133–137 (1979).

    PubMed  Google Scholar 

  2. Batra SK, Metzgar RS, Hollingsworth MA: Molecular cloning and sequence analysis of the human ribosomal protein S16. J Biol Chem 266: 6830–6833 (1991).

    PubMed  Google Scholar 

  3. Behnke H-D: Comparative ultrastructural investigations of angiosperm sieve elements: aspects of the origin and early development of P-protein. Z Pflanzenphysiol 74: 22–34 (1974).

    Google Scholar 

  4. Beintema J, Peumans WJ: The primary structure of stinging nettle (Urtica dioica) agglutinin. FEBS Lett 299: 131–134 (1992).

    Article  PubMed  Google Scholar 

  5. Bonham-Smith PC, Oancia TL, Moloney MM: Cytoplasmic ribosomal protein S15a from Brassica napus: molecular cloning and developmental expression in mitotically acitve tissues. Plant Mol Biol 18: 909–919 (1992).

    PubMed  Google Scholar 

  6. Bostwick DE, Dannenhoffer JM, Skaggs MI, Lister RM, Larkins BA, Thompson GA: Pumpkin phloem lectin genes are specifically expressed in companion cells. Plant Cell 4: 1539–1548 (1992).

    Article  PubMed  Google Scholar 

  7. Bostwick DE, Thompson GA: Nucleotide sequence of a pumpkin phloem lectin cDNA. Plant Physiol 102: 693–694 (1993).

    Article  PubMed  Google Scholar 

  8. Cronshaw J: P-proteins. In: Aronoff S, Dainty J, Gorham PR, Srivastava LM, Swanson CA (eds) Phloem Transport, pp. 79–127. Plenum Press, London (1974).

    Google Scholar 

  9. De Vries S, Hoge H, Bisseling T: Isolation of total and polysomal RNA from plant tissues. In: Gelvin SB, Schilperoort RA, Verma DPS (eds) Plant Molecular Biology Manual, pp. B6/1-B6/13. Kluwer Academic Publishers, Dordrecht (1988).

    Google Scholar 

  10. Doyle JJ, Doyle JL: A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem Bulletin 19: 11–15 (1987).

    Google Scholar 

  11. Dudov KP, Perry RP: The gene family encoding the mouse ribosomal protein L32 contains a uniquely expressed intron-containing gene and an unmutated processed gene. Cell 37: 457–468 (1984).

    Article  PubMed  Google Scholar 

  12. Esau K, Cronshaw J: Tubular components in cells of healthy and tobacco mosaic virus-infected Nicotiana. Virology 33: 26–35 (1967).

    Article  PubMed  Google Scholar 

  13. Eschrich W, Evert RF, Heyer W: Proteins of the sievetube exudate of Cucurbita maxima. Planta 100: 208–221 (1971).

    Google Scholar 

  14. Feinberg AP, Vogelstein B: A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity. Anal Biochem 132: 6–13 (1983).

    PubMed  Google Scholar 

  15. Gietl C, Kauss H, Ziegler H: Affinity chromatography of a lectin from Robinia pseudoacacia L. and demonstration of lectins in sieve-tube sap from other tree species. Planta 144: 367–371 (1979).

    Google Scholar 

  16. Graham JS, Hall G, Pearce G, Ryan CA: Regulation of synthesis of proteinase inhibitors I and II mRNAs in leaves of wounded tomato plants. Planta 169: 399–405 (1986).

    Google Scholar 

  17. Hall SM, Baker DA: The chemical composition of Ricinus phloem exudate. Planta 106: 131–140 (1972).

    Google Scholar 

  18. Hunkapiller MW, Lujan E, Ostrander F, Hood LE: Isolation of microgram quantities of protein from polyacrylamide gels for amino acid sequence analysis. In: Hirs CHW, Timasheff SN (eds) Methods in Enzymology, vol. 91, pp. 227–237. Academic Press, London (1983).

    Google Scholar 

  19. Joanin P, Gigot C, Philipps G: cDNA nucleotide sequence and expression of a maize cytoplasmic ribosomal protein S13 gene. Plant Mol Biol 21: 701–704 (1993).

    Google Scholar 

  20. Kennecke M, Ziegler H, de Fekete MAR: Enzyme activities in the sieve sap of Robinia pseudoacacia L. and of other tree species. Planta 98: 330–356 (1971).

    Google Scholar 

  21. Laemmli UK: Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227: 680–685 (1970).

    PubMed  Google Scholar 

  22. Lebrun M, Freyssinet G: Nucleotide sequence and characterization of a maize cytoplasmic ribosomal protein S11 cDNA. Plant Mol Biol 17: 265–268 (1991).

    Google Scholar 

  23. Lee DR: Possible significance of filaments in sieve elements. Nature 235: 286 (1972).

    Google Scholar 

  24. LeGendre N, Matsudaira P: Electroblotting to PVDF membranes. In: Matsudaira PT (ed) A Practical Guide to Protein and Peptide Purification for Microsequencing, pp. 53–59. Academic Press, London (1989).

    Google Scholar 

  25. Lehmann J: Studies on the phloem exudate of Cucurbita pepo L. Planta 114: 51–61 (1973).

    Google Scholar 

  26. MacRobbie EAC: Phloem translocation. Facts and mechanisms: a comparative survey. Biol Rev 46: 429–481 (1971).

    Google Scholar 

  27. Maniatis T, Fritsch EF, Sambrook J: Molecular Cloning: A Laboratory Manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY (1989).

    Google Scholar 

  28. Marty I, Meyer Y: cDNA nucleotide sequence and expression of a tobacco cytoplasmic ribosomal protein L2 gene. Nucl Acid Res 20: 1517–1522 (1992).

    Google Scholar 

  29. Mayer A, Siegel NR, Schwartz AL, Ciechanover A: Degradation of proteins with acetylated amino termini by ubiquitin system. Science 244: 1480–1483 (1989).

    PubMed  Google Scholar 

  30. Mohan R, Bajar AM, Kolattukudy PE: Induction of a tomato anionic peroxidase gene (tap 1) by wounding in transgenic tobacco and activation of tap 1/GUS and tap 2/GUS chimeric gene fusions in transgenic tobacco by wounding and pathogen attack. Plant Mol Biol 21: 341–354 (1993).

    Google Scholar 

  31. Möller W, Groene A, Terhorst C, Amons R: 50-S ribosomal proteins: purification and partial characterization of two acidic proteins, A1 and A2, isolated from 50-S ribosomes of Escherichia coli. Eur J Biochem 25: 5–12 (1972).

    PubMed  Google Scholar 

  32. Moos MJ, Nguyen NY, Liu TY: Reproducible high yield sequencing of proteins electrophoretically separated and transferred to an innert support. J Biol Chem 263: 6005–6008 (1988).

    PubMed  Google Scholar 

  33. Read SM, Northcote DH: Chemical and immunological similarities between the phloem proteins of three genera of the Cucurbitaceae. Planta 158: 119–127 (1983).

    Google Scholar 

  34. Read SM, Northcote DH: Subunit structure and interactions of the phloem proteins of Cucurbita maxima (pumpkin). Eur J Biochem 134: 561–569 (1983).

    PubMed  Google Scholar 

  35. Sabnis DD, Hart JW: The isolation and some properties of a lectin (haemagglutinin) from Cucurbita phloem exudate. Planta 142: 97–101 (1978).

    Google Scholar 

  36. Sanger F, Nicklen S, Coulson AR: DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci USA 74: 5463–5467 (1977).

    PubMed  Google Scholar 

  37. Schmidt J, Herfurth E, Subramanian AR: Purification and characterization of seven chloroplast ribosomal proteins: evidence that organelle ribosomal protein genes are functional and that NH2-terminal processing occurs via multiple pathways in chloroplasts. Plant Mol Biol 20: 459–465 (1992).

    PubMed  Google Scholar 

  38. Schulz A, Alosi MC, Sabnis DD, Park RB: A phloemspecific, lectin-like protein is located in pine sieve-element plastids by immunocytochemistry. Planta 179: 506–515 (1989).

    Google Scholar 

  39. Sham MH, Northcote DH: Transcription and translation of phloem protein (PP2) during phloem differentiation in Cucurbita maxima. Planta 170: 392–399 (1987).

    Google Scholar 

  40. Simmons CR, Litts JC, Huang N, Rodriguez RL: Structure of a rice β-glucanase gene regulated by ethylene, cytokinin, wounding, salicylic acid and fungal elicitors. Plant Mol Biol 18: 33–45 (1992).

    PubMed  Google Scholar 

  41. Slightom JL, Drong RF: Procedures for constructing genomic clone banks. In: Gelvin SB, Schilperoort RA, Verma DPS (eds) Plant Molecular Biology Manual, pp. A8/1-A8/42. Kluwer Academic Publishers, Dordrecht (1988).

    Google Scholar 

  42. Smith LM, Sabnis DD, Johnson RPC: Immunocytochemical localization of phloem lectin from Cucurbita maxima using peroxidase and colloidal-gold labels. Planta 170: 461–470 (1987).

    Article  Google Scholar 

  43. Suzuki K, Wool IG: The primary structure of rat ribosomal protein L23a. J Biol Chem 268: 2755–2761 (1993).

    PubMed  Google Scholar 

  44. Terhorst C, Möller W: The primary structure of an acidic protein from 50-S ribosomes of Escherichia coli is involved in GTP hydrolysis dependent on elongation factors G and T. Eur J Biochem 34: 138–152 (1973).

    PubMed  Google Scholar 

  45. Wagner M, Perry RP: Characterization of the multigene family encoding the mouse S16 ribosomal protein: strategy for distinguishing an expressed gene from its processed pseudogene counterpart by an analysis of total genomic DNA. Mol Cell Biol 5: 3560–3576 (1985).

    PubMed  Google Scholar 

  46. Weber C, Franke WW, Kartenbeck J: Structure and biochemistry of phloem-proteins isolated from Cucurbita maxima. Exp Cell Res 87: 79–106 (1974).

    PubMed  Google Scholar 

  47. Zingde SM, Shirsat NV, Gothoskar BP: Peptide mapping of proteins in gel bands after partial cleavage with acidic cyanogen bromide vapor. Anal Biochem 155: 10–13 (1986).

    PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Wang, MB., Boulter, D. & Gatehouse, J.A. Characterization and sequencing of cDNA clone encoding the phloem protein PP2 of Cucurbita pepo . Plant Mol Biol 24, 159–170 (1994). https://doi.org/10.1007/BF00040582

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00040582

Key words

Navigation