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RNA editing in plant mitochondria and chloroplasts

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Abstract

In the mitochondria and chloroplasts of higher plants there is an RNA editing activity responsible for specific C-to-U conversions and for a few U-to-C conversions leading to RNA sequences different from the corresponding DNA sequences. RNA editing is a post-transcriptional process which essentially affects the transcripts of protein coding genes, but has also been found to modify non-coding transcribed regions, structural RNAs and intron sequences. RNA editing is essential for correct gene expression: proteins translated from edited transcripts are different from the ones deduced from the genes sequences and usually present higher similarity to the corresponding non-plant homologues. Initiation and stop codons can also be created by RNA editing. RNA editing has also been shown to be required for the stabilization of the secondary structure of introns and tRNAs.

The biochemistry of RNA editing in plant organelles is still largely unknown. In mitochondria, recent experiments indicate that RNA editing may be a deamination process. A plastid transformation technique showed to be a powerful tool for the study of RNA editing. The biochemistry as well as the evolutionary features of RNA editing in both organelles are compared in order to identify common as well as organelle-specific components.

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References

  1. Allison LA, Maliga P: Light-responsive and transcription-enhancing elements regulate the plastid psbD core promoter. EMBO J 14: 3721–3730 (1995).

    Google Scholar 

  2. Araya A, Domec C, Bégu D, Litvak S: An in vitro system for the editing of ATP synthase subunit-9 messenger RNA using wheat mitochondrial extracts. Proc Natl Acad Sci USA 89: 1040–1044 (1992).

    Google Scholar 

  3. Bégu D, Graves PV, Domec C, Arselin G, Litvak S, Araya A: RNA editing of wheat mitochondrial ATP synthase subunit 9: direct protein and cDNA sequencing. Plant Cell 2: 1283–1290 (1990).

    Google Scholar 

  4. Benne R: RNA Editing. The Alteration of Protein Coding Sequences of RNA. Ellis Horwood, Chichester (1993).

    Google Scholar 

  5. Benne R, Van den Burg J, Brakenhoff J, Sloof P, Van Boom JH, Tromp MC: Major transcript of the frameshift coxll from trypanosome mitochondria contains four nucleotides that are not encoded in the DNA. Cell 46: 819–826 (1986).

    Google Scholar 

  6. Binder S, Marchfelder A, Brennicke A: RNA editing of tRNA(Phe) and tRNA(Cys) in mitochondria of Oenothera berteriana is initiated in precursor molecules. Mol Gen Genet 244: 67–74 (1994).

    Google Scholar 

  7. Binder S, Marchfelder A, Brennicke A, Wissinger B: RNA editing in trans-splicing intron sequences of nad2 messenger RNAs in Oenothera mitochondria. J Biol Chem 267: 7615–7623 (1992).

    Google Scholar 

  8. Bland MM, Levings CSIII, Matzinger DF: The tobacco mito chondrial ATPase subunit 9 gene is closely linked to an open reading frame for a ribosomal protein. Mol Gen Genet 204: 8–16 (1986).

    Google Scholar 

  9. Blum B, Balakara N, Simpson L: A model for RNA editing in kinetoplastid mitochondria: small ‘guide RNA’ molecules transcribed from maxicircle DNA provide the edited sequence information. Cell 60: 189–198 (1990).

    Google Scholar 

  10. Bock R, Hagemann R, Kössel H, Kudla J: Tissue-specific and stage-specific modulation of RNA editing of the psbF and psbL transcript from spinach plastids-a new regulatory mechanism? Mol Gen Genet 240: 238–244 (1993).

    Google Scholar 

  11. Bock R, Kössel H, Maliga P: Introduction of a heterologous editing site into the tobacco plastid genome: the lack of RND editing leads to a mutant phenotype. EMBO J 13: 4623–4628 (1994).

    Google Scholar 

  12. Bock R, Maliga P: In vivo testing of a tobacco plastid DNA segment for guide RNA function in psbL editing. Mol Gen Genet 247: 439–443 (1995).

    Google Scholar 

  13. Boer PH, McIntosh JE, Gray MW, Bonen L: The wheat mitochondrial gene for apocytochrome b: absence of a prokaryotic ribosome binding site. Nucl Acids Res 13: 2281–2292 (1985).

    Google Scholar 

  14. Bonen L, Williams K, Bird S, Wood C: The NADH dehydrogenase subunit 7 gene is interrupted by four group II introns in the wheat mitochondrial genome. Mol Gen Genet 244: 81–89 (1994).

    Google Scholar 

  15. Bonnard G, Grienenberger JM: A gene proposed to encode a transmembrane domain of an ABC transporter is expressed in wheat mitochondria. Mol Gen Genet 246: 81–99 (1995).

    Google Scholar 

  16. Bonnard G, Gualberto JM, Lamattina L, Grienenberger IM: RNA editing in plant mitochondria. CRC Crit. Rev. Plant Sci 10: 503–524 (1992).

    Google Scholar 

  17. Börner GV, Morl M, Wissinger B, Brennicke A, Schmelzer C. RNA editing of a group II intron in Oenothera as a prerequisite for splicing. Mol Gen Genet 246: 739–744 (1995).

    Google Scholar 

  18. Börner T, Schumann B, Hageman R: Biochemical studies on a plastid ribosome-deficient mutant of Hordeum vulgare. In Bücher T, Neupert W, Sebald S, Werner S (eds), Genetics and biogenesis of chloroplasts and mitochondria, pp. 41–48. Elsevier, Amsterdam (1976).

    Google Scholar 

  19. Boyen C, Leblanc C, Bonnard G, Grienenberger JM, Kloarcg B: Nucleotide sequence of the cox3 gene from Chondrus crispus: evidence that UGA encodes tryptophan and evolutionary implications. Nucl Acids Res 22: 1400–1403 (1994).

    Google Scholar 

  20. Chapdelaine Y, Bonen L: The wheat mitochondrial gene for subunit-I of the NADH dehydrogenase complex-A transsplicing model for this gene-in-pieces. Cell 65: 465–472 (1991).

    Google Scholar 

  21. Chaudhuri S, Carrer H, Maliga P: Site-specific factor involved in the editing of the psbL mRNA in tobacco plastids. EMBO J 14: 2951–2957 (1995).

    Google Scholar 

  22. Chen SH, Habib G, Yang CY, Gu ZW, Lee BR, Weng SA, Silberman SR, Cai SJ, Deslypere JP, Rosseneu M, Gotto AM, Li WH, Chan L: Apolipoprotein B-48 is the product of a messenger RNA with an organ-specific in-frame stop codon. Science 238: 363–366 (1987).

    Google Scholar 

  23. Covello PS, Gray MW: RNA editing in plant mitochondria. Nature 341: 662–666 (1989).

    Google Scholar 

  24. Covello PS, Gray MW: Differences in editing at homologous sites in messenger RNAs from angiosperm mitochondria. Nucl Acids Res 18: 5189–5196 (1990).

    Google Scholar 

  25. Covello PS, Gray MW: RNA sequence and the nature of the CuA-bbinding site in cytochrome c oxidase. FEBS Lett 268: 5–7 (1990).

    Google Scholar 

  26. Creissen G, Reynolds H, Xue Y, Mullineaux P: Simultancous targeting of pea glutathione reductase and of a bacterial fusion protein to chloroplasts and mitochondria in transgenic tobacco. Plant J 8: 167–175 (1995).

    Google Scholar 

  27. De Souza AP, Jubier MF, Delcher E, Lancelin D, Lejeune B: A trans-splicing model for the expression of the tripartitenad5 gene in wheat and maize mitochondria. Plant Cell 3: 1363–1378 (1991).

    Google Scholar 

  28. Dewey RE, Levings CSIII, Timothy DH: Novel recombinations in the maize mitochondrial genome produce a unique transcriptional unit in the Texas male sterile cytoplasm. Cell 44: 439–449 (1986).

    Google Scholar 

  29. Dorit LR, Schoenbach L, Gilbert W: How big is the universe of exons? Science 250: 1377–1382 (1990).

    Google Scholar 

  30. Fox TD, Leaver CJ: The Zea mays mitochondrial gene coding cytochrome oxidase subunit II has an intervening sequence and does not contain TGA codons. Cell 26: 315–323 (1981).

    Google Scholar 

  31. Freyer R, Hoch B, Neckermann K, Maier RM, Kössel H: RNA editing in maize chloroplasts is a processing step independent of splicing and cleavage to monocistronic mRNAs. Plant J 4: 621–629 (1993).

    Google Scholar 

  32. Freyer R, López C, Maier RM, Martin M, Sabater B, Kössel H: Editing of the chloroplast ndhB encoded transcripts shows divergence between closely related members of the grass family (poaceae). Plant Mol Biol, in press: (1995).

  33. Geiss KT, Abbas GM, Makaroff CA: Intron loss from the NADH dehydrogenase subunit 4 gene of lettuce mitochondrial DNA: evidence for homologous recombination of a cDNA intermediate. Mol Gen Genet 243: 97–105 (1994).

    Google Scholar 

  34. Glaubitz JC, Carlson JE: RNA editing in the mitochondria of a conifer. Curr Genet 22: 163–165 (1992).

    Google Scholar 

  35. Gonzalez DH, Bonnard G, Grienenberger JM: A gene involved in the biogenesis of c-type cytochromes is cotranscribed with a ribosomal protein gene in wheat mitochondria. Curr Genet 21: 248–255 (1993).

    Google Scholar 

  36. Graves PV, Bégu D, Velours J, Neau E, Belloc F, Litvak S, Araya A: Direct protein sequencing of wheat mitochondrial ATP synthase subunit 9 confirms RNA editing in plants. J Mol Biol 214: 1–6 (1990).

    Google Scholar 

  37. Gray MW, Covello PS: RNA editing in plant mitochondria and chloroplasts. FASEB J 7: 64–71 (1993).

    Google Scholar 

  38. Grohmann L, Thieck O, Herz U, Schroder W, Brennicke A: Translation of nad9 mRNAs in mitochondria from Solanum tuberosum is restricted to completely edited transcripts. Nucl Acids Res 22: 3304–3311 (1994).

    Google Scholar 

  39. Gualberto JM, Bonnard G, Lamattina L, Grienenberger JM: Expression of the wheat mitochondrial nad3-rps12 transcription unit: correlation between editing and mRNA maturation. Plant Cell 3: 1109–1120 (1991).

    Google Scholar 

  40. Gualberto JM, Domon C, Wei JH, Grienenberger JM: Structure and transcription of the gene coding for subunit 3 of cytochrome oxidase in wheat mitochondria. Curr Genet 17: 41–47 (1990).

    Google Scholar 

  41. Gualberto JM, Lamattina L, Bonnard G, Weil JH, Grienenberger JM: RNA editing in wheat mitochondria results in the convervation of protein sequences. Nature 341: 660–662 (1989).

    Google Scholar 

  42. Gualberto JM, Weil JH, Grienenberger JM: Editing of the wheat coxIII transcript: evidence for twelve C-to-U and one U-to-C conversions and for sequence similarities around editing sites. Nucl Acids Res 18: 3771–3776 (1990).

    Google Scholar 

  43. Gualberto JM, Wintz H, Weil JH, Grienenberger JM: The genes coding for subunit 3 of NADH dehydrogenase and for ribosomal protein S12 are present in the wheat and maize mitochondrial genomes and are co-transcribed. Mol Gen Genet 215: 118–127 (1988).

    Google Scholar 

  44. Hagemann R, Scholz F: Ein Fall Gen-induzierter Mutationen des Plasmotyps bei Gerste. Züchter 32: 50–59 (1962).

    Google Scholar 

  45. Hallick RB, Lipper C, Richards OC, Rutter WJ: Isolation of a transcriptionally active chromosome from chloroplasts of Euglena gracilis. Biochemistry 15: 3039–3045 (1976).

    Google Scholar 

  46. Handa H, Gualberto JM, Grienenberger JM: Characterization of the mitochondrial orfB gene and its derivative, orf224, a chimeric open reading frame specific to the mitochondrial genome of ‘Polima’ male-sterile cytoplasm in rapeseed (Brassica napus L.). Curr Genet 28: in press (1995).

  47. Haouazine N, De Souza AP, Jubier MF, Lancelin D, Delcher E, Lejeune B: The wheat mitochondrial genome contains an ORF showing sequence homology to the gene encoding the subunit 6 of the NADH ubiquinone oxidoreductase. Plant Mol Biol. 20: 395–404 (1992).

    Google Scholar 

  48. Hernould M, Mouras A, Litvak S, Araya A: RNA editing of the mitochondrial atp9 transcript from tobacco. Nucl Acids Res 20: 1809 (1992).

    Google Scholar 

  49. Hess WR, Hoch B, Zeltz P, Hübschmann T, Kössel H, Börner T: Inefficient rpl2 splicing in barley mutants with ribosomedeficient plastids. Plant Cell 6: 1455–1465 (1994).

    Google Scholar 

  50. Hiesel R, Combettes B, Brennicke A: Evidence for RNA editing in mitochondria of all major groups of land plants except the bryophyta. Proc Natl Acad Sci USA 91: 629–633 (1994).

    Google Scholar 

  51. Hiesel R, Wissinger B, Brennicke A: Cytochrome oxidase subunit II mRNAs in Oenothera mitochondria are edited at 24 sites. Curr Genet 18: 371–375 (1990).

    Google Scholar 

  52. Hiesel R, Wissinger B, Schuster W, Brennicke A: RNA editing in plant mitochondria. Science 246: 1632–1634 (1989).

    Google Scholar 

  53. Hiratsuka J, Shimada H, Whittier R, Ishibashi T, Sakamoto M, Mori M, Kondo C, Honji Y, Sun CR, Meng BY, Li YQ, Kanno A, Nishikawa Y, Hirai A, Shinozaki K, Sugiura M: The complete sequence of the rice (Oryza sativa) chloroplast genome: intermolecular recombination between distinct tRNA genes accounts for a major plastid DNA inversion during the evolution of cereals. Mol Gen Genet 217: 185–194 (1989).

    Google Scholar 

  54. Hirose T, Wakasugi T, Sugiura M, Kössel H: RNA editing of tobacco petB mRNAs occurs both in chloroplasts and non-photosynthetic proplastids. Plant Mol Biol. 26: 509–513 (1994).

    Google Scholar 

  55. Hoch B, Maier RM, Appel K, Igloi GL, Kössel H: Editing of a chloroplast mRNA by creation of an initiation codon. Nature 353: 178–180 (1991).

    Google Scholar 

  56. Holschuh K, Bottomley W, Whitfeld PR: Sequence of the genes for tRNACys and tRNAAsp from spinach chloroplasts. Nucl Acids Res 11: 8547–8554 (1983).

    Google Scholar 

  57. Igloi GL, Kössel H: The transcriptional apparatus of chloroplasts. CRC Crit. Rev. Plant Sci 10: 525–558 (1992).

    Google Scholar 

  58. Iwabuchi M, Kyozuka J, Shimamoto K: Processing followed by complete editing of an altered mitochondrial atp6 RNA restores fertility of cytoplasmic male sterile rice. EMBO J 12: 1437–1446 (1993).

    Google Scholar 

  59. Kavousi M, Giese K, Larrinua IM, McLaughlin WE, Subramanian AR: Nucleotide sequence and map positions of the duplicated gene for maize (Zea mays) chloroplast ribosomal protein L2. Nucl Acids Res 18: 4244–4244 (1990).

    Google Scholar 

  60. Knoop V, Schuster W, Wissinger B, Brennicke A: Trans-splicing integrates an exon of 22 nucleotides into the nad5 messenger RNA in higher plant mitochondria. EMBO J 10: 3483–3493 (1991).

    Google Scholar 

  61. Kössel H, Hoch B, Maier RM, Igloi GL, Kudla J, Zeltz P, Freyer R, Neckermann K, Ruf S: RNA editing in chloroplasts of higher plants. In Brennicke A, Kück U (eds), Plant mitochondria, pp. 93–102. VCH, Weinheim (1993).

    Google Scholar 

  62. Kudla J, Igloi G, Metzlaff M, Hagemann R, Kössel H: RNA editing in tobacco chloroplasts leads to the formation of a translatable psbL messenger RNA by a C-to-U substitution within the initiation codon. EMBO J 11: 1099–1103 (1992).

    Google Scholar 

  63. Kumar R, Levings CSIII: RNA editing of a chimeric maize mitochondrial gene transcript is sequence specific. Curr Genet 23: 154–159 (1993).

    Google Scholar 

  64. Kuntz M, Camara B, Weil JH, Schantz R: The psbL gene from bell pepper (Capsicum annuum): plastid RNA editing also occurs in non-photosynthetic chromoplasts. Plant Mol Biol. 20: 1185–1188 (1992).

    Google Scholar 

  65. Kuprinska K, Falk J: Changes in RNA-polymerase activity during development and senescence of barley chloroplasts. Comparative analysis of transcripts synthesized either in runon assays or by transcriptionally active chromosomes. J Plant Physiol. 143: 298–305 (1994).

    Google Scholar 

  66. Lamattina L, Gonzalez D, Gualberto JM, Grienenberger JM: Higher plant mitochondria encode an homologue of the nuclear-coded 30 kDa subunit of bovine mitochondrial complex I. Eur J Biochem 217: 831–838 (1993).

    Google Scholar 

  67. Lamattina L, Grienenberger JM: RNA editing of the transcript coding for subunit-4 of NADH dehydrogenase in wheat mitochondria-Uneven distribution of the editing sites among the 4 exons. Nucl Acids Res 19: 3275–3282 (1991).

    Google Scholar 

  68. Lippok B, Brennicke A, Wissinger B: Differential RNA editing in closely related introns in Oenothera mitochondria. Mol Gen Genet 243: 39–46 (1994).

    Google Scholar 

  69. Lonsdale DM, Hodge TP, Howe CJ, Stern DB: Maize mitochondrial DNA contains a sequence homologous to the ribulose-1,5-bisphosphate carboxylase large subunit gene of chloroplast DNA. Cell 34: 1007–1014 (1983).

    Google Scholar 

  70. Lu BW, Hanson MR: A single nuclear gene specifies the abundance and extent of RNA editing of a plant mitochondrial transcript. Nucl Acids Res 20: 5699–5703 (1992).

    Google Scholar 

  71. Lu BW, Hanson MR: A single homogeneous form of ATP6 protein accumulates in petunia mitochondria despite the presence of differentially edited atp6 tranccripts. Plant Cell 6: 1955–1968 (1994).

    Google Scholar 

  72. Mahendran R, Spottswood MR, Miller DL: RNA editing by cytidine insertion in mitochondria of Physarum polycephalum. Nature 349: 434–438 (1991).

    Google Scholar 

  73. Maier RM, Hoch B, Zeltz P, Kössel H: Internal editing of the maize chloroplast ndhA transcript restores codons for conserved amino acids. Plant Cell 4: 609–616 (1992).

    Google Scholar 

  74. Maier RM, Neckermann K, Hoch B, Akhmedov NB, Kössel H: Identification of editing positions in the ndhB transcript from maize chloroplasts reveals sequence similarities between editing sites of chloroplasts and plant mitochondria. Nucl Acids Res 20: 6189–6194 (1992).

    Google Scholar 

  75. Maier RM, Neckermann K, Igloi GL, Kössel H: Complete sequence of the maize chloroplast genome: gene content hotspots of divergence and fine tuning of genetic information by transcript editing. J Mol Biol. 251: 614–628 (1995).

    Google Scholar 

  76. Maréchal-Drouard L, Ramamonjisoa D, Cosset A, Weil JH, Dietrich A: Editing corrects mispairing in the acceptor stem of bean and potato mitochondrial phenylalanine transfer RNAs. Nucl Acids Res 21: 4909–4914 (1993).

    Google Scholar 

  77. Michel F, Umesono K, Oseki H: Comparative and functional anatomy of group II catalytic introns: a review. Gene 82: 5–30 (1989).

    Google Scholar 

  78. Moon E, Wu R: Organization and nucleotide sequence of genes at both junctions between the two inverted repeats and the large single- copy region in the rice chloroplast genome. Gene 70: 1–12 (1988).

    Google Scholar 

  79. Nakazono M, Hirai A: Identification of the entire set of transferred chloroplast DNA sequences in the mitochondrial genome of rice. Mol Gen Genet 236: 341–346 (1993).

    Google Scholar 

  80. Navaratnam N, Shah R, Patel D, Fay V, Scott J: Apolipoprotein-B messenger RNA editing is associated with UV crosslinking of proteins to the editing site. Proc. Natl. Acad. Sci USA 90: 222–226 (1993).

    Google Scholar 

  81. Neckermann K, Zeltz P, Igloi GL, Kössel H, Maier RM: The role of RNA editing in conservation of start codons in chloroplast genomes. Gene 146: 177–182 (1994).

    Google Scholar 

  82. Oda K, Yamato K, Ohta E, Nakamura Y, Takemura M, Nozato N, Akashi K, Kanegae T, Ogura Y, Kohchi T, Ohyama K: Gene organization deduced from the complete sequence of liverwort Marchantia polymorpha mitochondrial DNA: a primitive form of plant mitochondrial genome. J Mol Biol. 223: 1–7 (1992).

    Google Scholar 

  83. Ohyama K, Fukuzawa H, Kohchi T, Shirai H, Sano T, Sano S, Umesono K, Shiki Y, Takeuchi M, Chang Z, Aota S, Inokuchi H, Ozeki H: Chloroplast gene organization deduced from complete sequence of liverwort Marchantia polymorpha chloroplast DNA. Nature 322: 572–574 (1986).

    Google Scholar 

  84. Patell V Bonnard G, Lamattina L, Gualberto JM, Grienenberger JM: Trans-, cis-splicing and RNA editing for nad2 gene expression in wheat mitochondria. In: Brennicke A (eds), Proceedings of the HFSP-workshop RNA Editing in Plant Mitochondria, pp. 69. Berlin (1992).

  85. Rajasekhar VK, Mulligan RM: RNA editing in plant mitochondria: alpha-phosphate is retained during C-to-U conversion in mRNAs. Plant Cell 5: 1843–1852 (1993).

    Google Scholar 

  86. Reiss T, Link G: Characterization of transcriptionally active DNA-protein complexes from chloroplasts and etioplasts of mustard (Sinapis alba L.). Eur. J Biochem. 148: 207–212 (1985).

    Google Scholar 

  87. Ruf S, Zeltz P, Kössel H: Complete RNA editing of unspliced and dicistronic transcripts of the intron-containing reading frame IRF170 from maize chloroplasts. Proc. Natl. Acad. Sci USA 91: 2295–2299 (1994).

    Google Scholar 

  88. Schuster W, Hiesel R, Wissinger B, Brennicke A: RNA editing in the cytochrome b locus of the higher plant Oenothera berteriana includes a U-to-C transition. Mol Cell. Biol. 10: 2428–2431 (1990).

    Google Scholar 

  89. Schuster W, Ternes R, Knoop V, Hiesel R, Wissinger B, Brennicke A: Distribution of RNA editing sites in Oenothera mitochondrial mRNAs and rRNAs. Curr Genet 20: 397–404 (1991).

    Google Scholar 

  90. Schuster W, Unseld M, Wissinger B, Brennicke A: Ribosomal protein S14 transcripts are edited in Oenothera mitochondria. Nucl Acids Res 18: 229–233 (1990).

    Google Scholar 

  91. Schuster W, Wissinger B, Unseld M, Brennicke A: Transcripts of the NADH-dehydrogenase subunit 3 gene are differentially edited in Oenothera mitochondria. EMBO J 9: 263–269 (1990).

    Google Scholar 

  92. Shinozaki K, Ohme M, Tanaka M, Wakasugi T, Hayashida N, Matsubayashi T, Zaita N, Chunwongse J, Obokata J, Yamaguchi-Shinozaki K, Ohto C, Torazawa K, Meng BY, Sugita M, Deno H, Kamogashira T, Yamada K, Kusuda J, Takaiwa F, Kato A, Tohdoh N, Shimida H, Sugiura M: The complete nucleotide sequence of the tobacco chloroplast genome: its gene organization and expression. EMBO J 5: 2043–2049 (1986).

    Google Scholar 

  93. Simpson L, Maslov DA, Blum B: RNA editing in Leishmania mitochondria. In: Benne R (eds). RNA editing. The Alteration of Protein Coding Sequences of RNA. Ellis Horwood, Chichester (1993).

    Google Scholar 

  94. Simpson L, Shaw J: RNA editing and the mitochondrial cryptogenes of kinetoplastid protozoa. Cell 57: 355–366 (1989).

    Google Scholar 

  95. Sommer B, Kohler M, Sprengel R, Seeburg PH: RNA editing in brain controls a determinant of ion flow in glutamate-gated channels. Cell 67: 11–19 (1991).

    Google Scholar 

  96. Staub JM, Maliga P: Accumulation of D1 polypeptide in tobacco plastids is regulated via the untranslated region of the psbA mRNA. EMBO J 12: 601–606 (1993).

    Google Scholar 

  97. Stern DB, Lonsdale DM: Mitochondrial and chloroplast genomes of maize have a 12-kilobase DNA sequence in common. Nature 299: 698–702 (1982).

    Google Scholar 

  98. Sutton CA, Conklin PL, Pruitt KD, Hanson MR: Editing of pre-mRNAs can occur before cis- and trans-splicing in Petunia mitochondria. Mol Cell. Biol. 11: 4274–4277 (1991).

    Google Scholar 

  99. Sutton CA, Zoubenko OV, Hanson MR, Maliga P: A plant mitochondrial sequence transcribed in transgenic tobacco chloroplasts in not edited. Mol Cell Biol. 15: 1377–1381 (1995).

    Google Scholar 

  100. Thomas SM, Lamb RA, Paterson RG: Two mRNAs that differ by two nontemplated nucleotides encode the amino coterminal proteins P and V of the paramyxovirus SV5. Cell 54: 891–902 (1988).

    Google Scholar 

  101. Wakasugi T, Ohme M, Shinozaki K, Suguira M: Structures of tobacco chloroplast genes for tRNA(Ile,CAU), tRNA(Leu,CAA), tRNA(Cys,GCA), tRNA(Ser,UGA) and tRNA(Thr,GGU): a compilation of tRNA genes from tobacco chloroplasts. Plant Mol Biol. 7: 385–392 (1986).

    Google Scholar 

  102. Wakasugi T, Tsudzuki J, Ito S, Nakashima K, Tsudzuki T, Suguira M: Loss of all ndh genes as determined by sequencing the entire chloroplast genome of the black pine Pinus thunbergii. Proc. Natl. Acad. Sci USA 91: 9794–9798 (1994).

    Google Scholar 

  103. Ward GC, Levings CSIII: The protein-encoding geneT-urf13 is not edited in maize mitochondria. Plant Mol Biol. 17: 1083–1088 (1991).

    Google Scholar 

  104. Wissinger B, Brennicke A, Schuster W: Regenerating good sense: RNA editing and trans-splicing in plant mitochondria. Trends Genet 8: 322–328 (1992).

    Google Scholar 

  105. Wissinger B, Schuster W, Brennicke A: Trans splicing in Oenothera mitochondria: nad1 mRNAs are edited in exon and trans-splicing group-II intron sequences. Cell 65: 473–482 (1991).

    Google Scholar 

  106. Yang AJ, Mulligan RM: RNA editing intermediates of cox2 transcripts in maize mitochondria. Mol Cell Biol 11: 4278–4281 (1991).

    Google Scholar 

  107. Yu W, Schuster W: Evidence for a site-specific cytidine deamination reaction involved in C-to-U RNA editing of plant mitochondria. J Biol. Chem. 270: 18227–18233 (1995).

    Google Scholar 

  108. Zanlungo S, Bégu D, Quinones V, Araya A, Jordana X: RNA editing of apocytochrome-b (cob) transcripts in mitochondria from two genera of plants. Curr Genet 24: 344–348 (1993).

    Google Scholar 

  109. Zanlungo S, Quinones V, Moenne A, Holuigue L, Jordana X: Splicing and editing of rps 10 transcripts in potato mitochondria. Curr Genet 27: 565–571 (1995).

    Google Scholar 

  110. Zeltz P, Hess WR, Neckermann K, Börner T, Kössel H: Editing of the chloroplastrpoB transcript is independent of chloroplast translation and shows different patterns in barley and maize. EMBO J 12: 4291–4296 (1993).

    Google Scholar 

  111. Zeltz P, Kadowaki K, Kubo N, Maier RM, Hirai A, Kössel H: A promiscuous chloroplast DNA fragment is transcribed in plant mitochondria but the encoded RNA is not edited. Submitted

  112. Zheng H, Fu TB, Lazinski D, Taylor J: Editing on the genomic DNA of human hepatitis delta virus. J Virol 66: 4693–4697 (1992).

    Google Scholar 

  113. Zhuo DG, Bonen L: Characterization of the S7 ribosomal protein gene in wheat mitochondria. Mol Gen Genet 236: 395–401 (1993).

    Google Scholar 

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Maier, R.M., Zeltz, P., Kössel, H. et al. RNA editing in plant mitochondria and chloroplasts. Plant Mol Biol 32, 343–365 (1996). https://doi.org/10.1007/BF00039390

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