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Molecular cloning and characterisation of asparagine synthetase from Lotus japonicus: Dynamics of asparagine synthesis in N-sufficient conditions

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Abstract

Two cDNA clones, LJAS1 and LJAS2, encoding different asparagine synthetases (AS) have been identified and sequenced and their expression in Lotus japonicus characterised. Analysis of predicted amino acid sequences indicated a high level of identity with other plant AS sequences. No other AS genes were detected in the L. japonicus genome. LJAS1 gene expression was found to be root-enhanced and lower levels of transcript were also identified in photosynthetic tissues. In contrast, LJAS2 gene expression was root-specific. These patterns of AS gene expression are different from those seen in pea. AS gene expression was monitored throughout a 16 h light/8 h dark day, under nitrate-sufficient conditions. Neither transcript showed the dark-enhanced accumulation patterns previously reported for other plant AS genes. To evaluate AS activity, the molecular dynamics of asparagine synthesis were examined in vivo using 15N-ammonium labelling. A constant rate of asparagine synthesis in the roots was observed. Asparagine was the most predominant amino-component of the xylem sap and became labelled at a slightly slower rate than the asparagine in the roots, indicating that most root asparagine was located in a cytoplasmic ‘transport’ pool rather than in a vacuolar ‘storage’ pool. The steady-state mRNA levels and the 15N-labelling data suggest that light regulation of AS gene expression is not a factor controlling N-assimilation in L. japonicus roots during stable growth in N-sufficient conditions.

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References

  1. Andrews M: The partitioning of nitrate assimilation between root and shoot of higher plants. Plant Cell Environ 9: 511–519 (1986).

    Google Scholar 

  2. Chattopadhyay N, Kher R, Godbole M: Inexpensive SDS/phenol method for RNA extraction from tissues. BioTechniques 15: 24–26 (1993).

    PubMed  Google Scholar 

  3. Church GM, Gilbert W: Genomic sequencing. Proc Natl Acad Sci USA 81: 1991 (1984).

    PubMed  Google Scholar 

  4. Davies KM, King GA: Isolation and characterization of a cDNA clone for a harvest-induced asparagine synthetase from Asparagus officinalis L. Plant Physiol 102: 1337–1340 (1993).

    Article  PubMed  Google Scholar 

  5. Fortin MG, Purohit SK, Verma DPS: The primary structure of soybean (Glycine max) ubiquitin is identical to other plant ubiquitins. Nucl Acids Res 16: 11377 (1988).

    PubMed  Google Scholar 

  6. Grundemann D, Koepsaell H: Ethidium bromide staining during glyoxalation with glyoxal for sensitive detection of RNA in agarose gel electrophoresis. Anal Biochem 216: 459–461 (1994).

    Article  PubMed  Google Scholar 

  7. Handeberg K, Stougaard J: Lotus japonicus, an autogamous, diploid legume species for classical and molecular genetics. Plant J 2: 487–496, (1992).

    Google Scholar 

  8. Huber TA, Streeter JG: Purification and properties of asparagine synthetase from soybean root nodules. Plant Sci 42: 9–17 (1985).

    Article  Google Scholar 

  9. Jang J-C, Sheen J: Sugar-sensing in higher plants. Plant Cell 6: 1665–1679 (1994).

    Article  PubMed  Google Scholar 

  10. Joy KW, Ireland RJ, Lea PJ: Asparagine synthetase in pea leaves, and the occurrence of an asparagine synthetase inhibitor. Plant Physiol 73: 165–168 (1983).

    Google Scholar 

  11. Lam H-M, Peng SS-Y, Coruzzi GM: Metabolic regulation of the gene encoding glutamine-dependent asparagine synthetase in Arabidopsis thaliana. Plant Physiol 106: 1347–1357 (1994).

    Article  PubMed  Google Scholar 

  12. Lea PJ, Miffin BJ: Transport and metabolism of asparagine and other nitrogen compounds within the plant. In: Stumpf PK, Conn EE (eds) The Biochemistry of Plants, pp. 569–607. Academic Press, New York (1980).

    Google Scholar 

  13. Lee RB: The release of nitrite from barley roots in response to metabolic inhibitors, uncoupling agents, and anoxia. J Exp Bot 30: 119–133 (1979).

    Google Scholar 

  14. Lee RB, Lewis MJ: Synthesis and 15N-labelling of glutamine and glutamate in maize roots during early stages of 15N-ammonium assimilation. J Exp Bot 45: 767–777 (1994).

    Google Scholar 

  15. Li X-Z, Larson DE, Glibetic M, Oaks A: Effect of glutamine on the induction of nitrate reductase. Physiol Plant 93: 740–744 (1995).

    Article  Google Scholar 

  16. Mei B, Zalkin H: A cysteine-histidine-aspartate catalytic triad is involved in glutamine amide transfer function in purF-type glutamine amidotransferases. J Biol Chem 264: 16613–16619 (1989).

    PubMed  Google Scholar 

  17. Murray MJ, Thompson WF: Rapid isolation of high molecular weight plant DNA. Nucl Acids Res 8: 4321–4325 (1980).

    PubMed  Google Scholar 

  18. Oaks A: A re-evaluation of nitrogen assimilation in roots. BioScience 42: 103–111 (1992).

    Google Scholar 

  19. Rothnie HM, Reid J, Hohn T: The contribution of AAUAAA and the upstream element UUUGUA to the efficiency of mRNA 3′-end formation in plants. EMBO J 13: 2200–2210 (1994).

    PubMed  Google Scholar 

  20. Rouze P, Caboche M: Nitrate reduction in higher plants: molecular approaches to function and regulation. In: Wray JL (ed) Inducible Plant Proteins, pp. 45–77. Society for Experimental Biology Seminar Series. Cambridge University Press, Cambridge, UK (1992).

    Google Scholar 

  21. Sambrook J, Fritsch EF, Maniatis T: Molecular Cloning: A Laboratory Manual, 2nd ed. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY (1989).

    Google Scholar 

  22. Scott DB, Farnden KJF, Robertson JG: Ammonia assimilation in lupin nodules. Nature 263: 703–705 (1976).

    Google Scholar 

  23. Sheen J: Metabolic repression of transcription in higher plants. Plant Cell 2: 1027–1038 (1990).

    Article  PubMed  Google Scholar 

  24. Sieciechwicz KA, Joy KW, Ireland RJ: The metabolism of asparagine in plants. Phytochemistry 27: 663–671 (1988).

    Article  Google Scholar 

  25. Streeter JM: Asparaginase and asparagine transaminase in soybean leaves and nodules. Plant Physiol 69: 848–852 (1977).

    Google Scholar 

  26. Thomas BR, Rodriguez RL: Metabolite signals regulate gene expression and source/sink relations in cereal seedlings. Plant Physiol 106: 1235–1239 (1994).

    PubMed  Google Scholar 

  27. Tsai F-Y, Coruzzi GM: Dark-induced and organ-specific expession of two asparagine synthetase genes in Pisum sativum. EMBO J 9: 323–332 (1990).

    PubMed  Google Scholar 

  28. Tsai F-Y, Coruzzi GM: Light repression transcription of asparagine synthetase genes in photosynthetic and non-photosynthetic organs of plants. Mol Cell Biol 11: 4966–4972 (1991).

    PubMed  Google Scholar 

  29. Urquhart AA, Joy KW: Transport, metabolism, and redistribution of xylem-borne amino acids in developing pea shoots. Plant Physiol 69: 1226–1232 (1982).

    Google Scholar 

  30. Verwoerd TC, Dekker BMM, Hoekema A: A small-scale procedure for the rapid isolation of plant RNAs. Nucl Acids Res 17: 2362 (1989).

    PubMed  Google Scholar 

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Waterhouse, R.N., Smyth, A.J., Massonneau, A. et al. Molecular cloning and characterisation of asparagine synthetase from Lotus japonicus: Dynamics of asparagine synthesis in N-sufficient conditions. Plant Mol Biol 30, 883–897 (1996). https://doi.org/10.1007/BF00020801

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  • DOI: https://doi.org/10.1007/BF00020801

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