Abstract
Primary bone tumors are rare cancers that cause significant morbidity and mortality. The recent identification of recurrent mutations in histone genes H3F3A and H3F3B within specific bone cancers, namely, chondroblastomas and giant cell tumors of bone (GCTB), has provided insights into the cellular and molecular origins of these neoplasms and enhanced understanding of how histone variants control chromatin function. Somatic mutations in H3F3A and H3F3B produce oncohistones, H3.3G34W and H3.3K36M, in more than nine of ten GCTB and chondroblastomas, respectively. Incorporation of the mutant histones into nucleosomes inhibits histone methyltransferases NSD2 and SETD2 to alter the chromatin landscape and change gene expression patterns that control cell proliferation, survival, and differentiation, as well as DNA repair and chromosome stability. The discovery of these histone mutations has facilitated more accurate diagnoses of these diseases and stratification of malignant tumors from benign tumors so that appropriate care can be delivered. The broad-scale epigenomic and transcriptomic changes that arise from incorporation of mutant histones into chromatin provide opportunities to develop new and disease-specific therapies. In this chapter, we review how mutant histones inhibit SETD2 and NSD2 function in bone tumors and discuss how this information could lead to better treatments for these cancers.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Abbreviations
- CAF-1:
-
Chromatin assembly factor 1
- DRD2:
-
Dopamine receptor D2
- GCTB:
-
Giant cell tumor of bone
- H3:
-
Histone 3
- HIRA:
-
Histone regulator A
- HMTase:
-
Histone methyltransferase
- K:
-
Lysine
- KDM:
-
Lysine demethylase
- KMT:
-
Lysine methylation transferase
- Me:
-
Methyl group
- MMSET:
-
Multiple myeloma SET domain
- NSD:
-
Nuclear receptor SET domain-containing
- PRC2:
-
Polycomb-repressive complex 2
- PRMT:
-
Protein arginine methyltransferases
- PTM:
-
Posttranslational modification
- RRM2:
-
Ribonucleotide reductase regulatory subunit M2
- SETD:
-
Su(var)3-9, Enhancer of Zeste, Trithorax domain-containing
- SRI:
-
Set2 Rpb1 interacting domain
- WHSC1:
-
Wolf-Hirschhorn syndrome gene (aka, NSD2)
References
Sankar S, Lessnick SL (2011) Promiscuous partnerships in Ewing’s sarcoma. Cancer Genet 204(7):351–365
Franchi A et al (2016) Histone 3.3 mutations in giant cell tumor and giant cell-rich sarcomas of bone. Lab Invest 96:17a–18a
Behjati S et al (2013) Distinct H3F3A and H3F3B driver mutations define chondroblastoma and giant cell tumor of bone. Nat Genet 45(12):1479–U105
Karsenty G, Kronenberg HM, Settembre C (2009) Genetic control of bone formation. Annu Rev Cell Dev Biol 25:629–648
Aghajanian P, Mohan S (2018) The art of building bone: emerging role of chondrocyte-to-osteoblast transdifferentiation in endochondral ossification. Bone Res 6:19
Siclari VA, Guise TA, Chirgwin JM (2006) Molecular interactions between breast cancer cells and the bone microenvironment drive skeletal metastases. Cancer Metastasis Rev 25(4):621–633
Kadyrova LY, Blanko ER, Kadyrov FA (2013) Human CAF-1-dependent nucleosome assembly in a defined system. Cell Cycle 12(20):3286–3297
Burgess RJ, Zhang Z (2013) Histone chaperones in nucleosome assembly and human disease. Nat Struct Mol Biol 20(1):14–22
Mohammad F, Helin K (2017) Oncohistones: drivers of pediatric cancers. Genes Dev 31(23-24):2313–2324
Jenuwein T, Allis CD (2001) Translating the histone code. Science 293(5532):1074–1080
Khoury GA, Baliban RC, Floudas CA (2011) Proteome-wide post-translational modification statistics: frequency analysis and curation of the swiss-prot database. Sci Rep 1:90
Rothbart SB, Strahl BD (2014) Interpreting the language of histone and DNA modifications. Biochim Biophys Acta 1839(8):627–643
Xu GG et al (2018) Signaling specificity in the c-di-GMP-dependent network regulating antibiotic synthesis in Lysobacter. Nucleic Acids Res 46(18):9276–9288
Serefidou M, Venkatasubramani AV, Imhof A (2019) The impact of one carbon metabolism on histone methylation. Front Genet 10:764
Greer EL, Shi Y (2012) Histone methylation: a dynamic mark in health, disease and inheritance. Nat Rev Genet 13(5):343–357
Joh RI et al (2014) Regulation of histone methylation by noncoding RNAs. Biochim Biophys Acta-Gene Regul Mech 1839(12):1385–1394
Benveniste D et al (2014) Transcription factor binding predicts histone modifications in human cell lines. Proc Natl Acad Sci U S A 111(37):13367–13372
Bannister AJ, Kouzarides T (2011) Regulation of chromatin by histone modifications. Cell Res 21(3):381–395
Bennett RL et al (2017) The role of nuclear receptor-binding SET domain family histone lysine methyltransferases in cancer. Cold Spring Harb Perspect Med 7(6):a026708
Wagner EJ, Carpenter PB (2012) Understanding the language of Lys36 methylation at histone H3. Nat Rev Mol Cell Biol 13(2):115–126
Fang D et al (2016) The histone H3.3K36M mutation reprograms the epigenome of chondroblastomas. Science 352(6291):1344–1348
Lu C et al (2016) Histone H3K36 mutations promote sarcomagenesis through altered histone methylation landscape. Science 352(6287):844–849
Kuo AJ et al (2011) NSD2 links Dimethylation of histone H3 at lysine 36 to oncogenic programming. Mol Cell 44(4):609–620
Chesi M et al (1998) The t(4;14) translocation in myeloma dysregulates both FGFR3 and a novel gene, MMSET, resulting in IgH/MMSET hybrid transcripts. Blood 92(9):3025–3034
Martinez-Garcia E et al (2011) The MMSET histone methyl transferase switches global histone methylation and alters gene expression in t(4;14) multiple myeloma cells. Blood 117(1):211–220
Roy DM, Walsh LA, Chan TA (2014) Driver mutations of cancer epigenomes. Protein Cell 5(4):265–296
Sun XJ et al (2005) Identification and characterization of a novel human histone H3 lysine 36-specific methyltransferase. J Biol Chem 280(42):35261–35271
Mohammad F et al (2017) EZH2 is a potential therapeutic target for H3K27M-mutant pediatric gliomas. Nat Med 23(4):483
Macias MJ et al (1996) Structure of the WW domain of a kinase-associated protein complexed with a proline-rich peptide. Nature 382(6592):646–649
Lu PJ et al (1999) Function of WW domains as phosphoserine- or phosphothreonine-binding modules. Science 283(5406):1325–1328
Sze CI et al (2004) Down-regulation of WW domain-containing oxidoreductase induces Tau phosphorylation in vitro – a potential role in Alzheimer’s disease. J Biol Chem 279(29):30498–30506
Yendamuri S et al (2003) WW domain containing oxidoreductase gene expression is altered in non-small cell lung cancer. Cancer Res 63(4):878–881
Li J et al (2016) SETD2: an epigenetic modifier with tumor suppressor functionality. Oncotarget 7(31):50719–50734
Kizer KO et al (2005) A novel domain in Set2 mediates RNA polymerase II interaction and couples histone H3 K36 methylation with transcript elongation. Mol Cell Biol 25(8):3305–3316
McDaniel SL, Strahl BD (2017) Shaping the cellular landscape with Set2/SETD2 methylation. Cell Mol Life Sci 74(18):3317–3334
Newbold RF, Mokbel K (2010) Evidence for a tumour suppressor function of SETD2 in human breast cancer: a new hypothesis. Anticancer Res 30(9):3309–3311
Duns G et al (2010) Histone methyltransferase gene SETD2 is a novel tumor suppressor gene in clear cell renal cell carcinoma. Cancer Res 70(11):4287–4291
Linne H et al (2017) Functional role of SETD2, BAP1, PARP-3 and PBRM1 candidate genes on the regulation of hTERT gene expression. Oncotarget 8(37):61890–61900
Wan YCE, Liu J, Chan KM (2018) Histone H3 mutations in cancer. Curr Pharmacol Rep 4(4):292–300
Yang S et al (2016) Molecular basis for oncohistone H3 recognition by SETD2 methyltransferase. Genes Dev 30(14):1611–1616
Palmerini E et al (2019) Malignancy in giant cell tumor of bone: a review of the literature. Technol Cancer Res Treat 18:1533033819840000
Domovitov SV, Healey JH (2010) Primary malignant Giant-cell tumor of bone has high survival rate. Ann Surg Oncol 17(3):694–701
Behjati S et al (2014) Distinct H3F3A and H3F3B driver mutations define chondroblastoma and giant cell tumor of bone (vol 45, pg 1479, 2013). Nat Genet 46(3):316–316
Wojcik J, Cooper K (2017) Epigenetic alterations in bone and soft tissue tumors. Adv Anat Pathol 24(6):362–371
Shi L et al (2018) Histone H3.3 G34 mutations Alter histone H3K36 and H3K27 methylation in cis. J Mol Biol 430(11):1562–1565
Lim J et al (2017) The histone variant H3.3 G34W substitution in giant cell tumor of the bone link chromatin and RNA processing. Sci Rep 7(1):13459
Ottaviani G, Jaffe N (2009) The epidemiology of osteosarcoma. Cancer Treat Res 152:3–13
Koelsche C et al (2017) Histone 3.3 hotspot mutations in conventional osteosarcomas: a comprehensive clinical and molecular characterization of six H3F3A mutated cases. Clin Sarcoma Res 7:9
Pfister SX et al (2015) Inhibiting WEE1 selectively kills histone H3K36me3-deficient cancers by dNTP starvation. Cancer Cell 28(5):557–568
Chan KM et al (2013) Neuro-Oncology 15:176–177
Ralff MD et al (2017) ONC201: a new treatment option being tested clinically for recurrent glioblastoma. Transl Cancer Res 6:S239–S243
Disclosures
The authors have no conflicts of interest.
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2021 Springer Nature Singapore Pte Ltd.
About this chapter
Cite this chapter
Taylor, E.L., Westendorf, J.J. (2021). Histone Mutations and Bone Cancers. In: Fang, D., Han, J. (eds) Histone Mutations and Cancer. Advances in Experimental Medicine and Biology, vol 1283. Springer, Singapore. https://doi.org/10.1007/978-981-15-8104-5_4
Download citation
DOI: https://doi.org/10.1007/978-981-15-8104-5_4
Published:
Publisher Name: Springer, Singapore
Print ISBN: 978-981-15-8103-8
Online ISBN: 978-981-15-8104-5
eBook Packages: Biomedical and Life SciencesBiomedical and Life Sciences (R0)